RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 URM1Q9BTM9 101 aaKnown RBP2.36□□□□□ -2.03
YBX3-205ENST00000536107 DAZ3Q9NR90 486 aaKnown RBP2.36□□□□□ -2.03
YBX3-205ENST00000536107 MRPL16Q9NX20 251 aaKnown RBP2.36□□□□□ -2.03
YBX3-205ENST00000536107 OR2W1Q9Y3N9 320 aa2.36□□□□□ -2.03
YBX3-205ENST00000536107 A0A0A6YYD4 124 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 TRAV12-3A0A0B4J271 114 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 CORTO00230 105 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 PAGE4O60829 102 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 DIRAS3O95661 229 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 KRASP01116 189 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 IFNA7P01567 189 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 IGKV1-17P01599 117 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 HLA-DQB1P01920 261 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 HOXB5P09067 269 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 RD3LP0DJH9 198 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 OR10J1P30954 320 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 MEOX2P50222 304 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 UBE2D1P51668 147 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 SUB1P53999 127 aaKnown RBP eCLIP2.35□□□□□ -2.03
YBX3-205ENST00000536107 CNBPP62633 177 aaKnown RBP2.35□□□□□ -2.03
YBX3-205ENST00000536107 RPL19P84098 196 aaKnown RBP2.35□□□□□ -2.03
YBX3-205ENST00000536107 EFNB1P98172 346 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 CATR1Q13166 79 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 HSP90B2PQ58FF3 399 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 MEDAGQ5VYS4 303 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 RPL22L1Q6P5R6 122 aaKnown RBP2.35□□□□□ -2.03
YBX3-205ENST00000536107 Q6ZRP5 223 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 CROCCP2Q86T23 111 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 CCDC190Q86UF4 302 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 RNF182Q8N6D2 247 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 INO80EQ8NBZ0 244 aaPredicted RBP2.35□□□□□ -2.03
YBX3-205ENST00000536107 ZNF680Q8NEM1 530 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 OR51G1Q8NGK1 321 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 OR4X1Q8NH49 305 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 OR51H1Q8NH63 302 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 OR4A16Q8NH70 328 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 IL22RA2Q969J5 263 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 UBE2WQ96B02 151 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 SEC22AQ96IW7 307 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 C20orf144Q9BQM9 153 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 SIKE1Q9BRV8 207 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 RSG1Q9BU20 258 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 PECRQ9BY49 303 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 KCNK15Q9H427 330 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 MAGIXQ9H6Y5 334 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 PLAC8Q9NZF1 115 aa2.35□□□□□ -2.03
YBX3-205ENST00000536107 MRPL36Q9P0J6 103 aaKnown RBP2.35□□□□□ -2.03
YBX3-205ENST00000536107 IGHV3-64A0A075B6Q5 118 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 IGKV1D-13A0A0B4J2D9 117 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 LOC100131303A0A0U1RQF7 123 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 USP17L23D6RBM5 183 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 RBFOX2O43251 390 aaKnown RBP eCLIP2.34□□□□□ -2.03
YBX3-205ENST00000536107 SPINK4O60575 86 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 HLA-DQA1P01909 254 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 CDK1P06493 297 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 PRSS1P07477 247 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 PFN1P07737 140 aaKnown RBP2.34□□□□□ -2.03
YBX3-205ENST00000536107 FCGR3AP08637 254 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 SFTA3P0C7M3 94 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 SEC11BP0C7V7 166 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 CT45A10P0DMU9 189 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 IGKV1-13P0DP09 117 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 G6PCP35575 357 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 GALR1P47211 349 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 MT1HP80294 61 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 MEF2DQ14814 521 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 POU2AF1Q16633 256 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 MAJINQ3KP22 176 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 Q499Y3 187 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 FAM162BQ5T6X4 162 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 AADACL3Q5VUY0 350 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 HACD4Q5VWC8 232 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 PET117Q6UWS5 81 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 TMEM75Q8N9X5 138 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 SPACA4Q8TDM5 124 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 DNAJC9Q8WXX5 260 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 DNAJC30Q96LL9 226 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 CCL28Q9NRJ3 127 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 DAPK2Q9UIK4 370 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 KLF12Q9Y4X4 402 aa2.34□□□□□ -2.03
YBX3-205ENST00000536107 IGKV2-24A0A0C4DH68 120 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 FABP12A6NFH5 140 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 CRYM-AS1A6NIL9 109 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 CTXN2P0C2S0 81 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 GABRB1P18505 474 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 HSPA13P48723 471 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 RND2P52198 227 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 TMEM50BP56557 158 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 ARPC4P59998 168 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 YPEL3P61236 119 aaPredicted RBP2.33□□□□□ -2.04
YBX3-205ENST00000536107 SUPT4H1P63272 117 aaKnown RBP2.33□□□□□ -2.04
YBX3-205ENST00000536107 EIF4EBP1Q13541 118 aaPredicted RBP2.33□□□□□ -2.04
YBX3-205ENST00000536107 CIRBPQ14011 172 aaKnown RBP2.33□□□□□ -2.04
YBX3-205ENST00000536107 C2orf76Q3KRA6 126 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 ZNF876PQ49A33 203 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 C1orf194Q5T5A4 169 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 C12orf73Q69YU5 71 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 STEAP1BQ6NZ63 245 aa2.33□□□□□ -2.04
YBX3-205ENST00000536107 KCNIP4Q6PIL6 250 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms