RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 OR7C2O60412 319 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 ZNF253O75346 499 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 STAG3L2P0CL84 134 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 STAG3L3P0CL85 134 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 HIST1H1EP10412 219 aaKnown RBP12.86□□□□□ -0.35
CTSB-229ENST00000533572 LCN15Q6UWW0 184 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 RAB24Q969Q5 203 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 WWC2-AS2Q96NR7 200 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 PAXXQ9BUH6 204 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 SLC25A2Q9BXI2 301 aa12.86□□□□□ -0.35
CTSB-229ENST00000533572 IGKV3-7A0A075B6H7 116 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 K7EQG2 157 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 CXorf1O96002 111 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 SULT1A2P50226 295 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 SNRPD3P62318 126 aaKnown RBP12.85□□□□□ -0.35
CTSB-229ENST00000533572 PDE6HQ13956 83 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 SPATA31B1PQ5VZV4 182 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 LRRC20Q8TCA0 184 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 DCANP1Q8TF63 244 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 FAM167A-AS1Q96KT0 104 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 SLC50A1Q9BRV3 221 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 C19orf73Q9NVV2 129 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 BOLA1Q9Y3E2 137 aa12.85□□□□□ -0.35
CTSB-229ENST00000533572 TEX46H3BTG2 121 aa12.84□□□□□ -0.35
CTSB-229ENST00000533572 ISLRO14498 428 aa12.84□□□□□ -0.35
CTSB-229ENST00000533572 CD7P09564 240 aa12.84□□□□□ -0.35
CTSB-229ENST00000533572 IGLC2P0DOY2 106 aa12.84□□□□□ -0.35
CTSB-229ENST00000533572 PSMB3P49720 205 aa12.84□□□□□ -0.35
CTSB-229ENST00000533572 GBGT1Q8N5D6 347 aa12.84□□□□□ -0.35
CTSB-229ENST00000533572 RNF141Q8WVD5 230 aa12.84□□□□□ -0.35
CTSB-229ENST00000533572 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
CTSB-229ENST00000533572 TFPI2P48307 235 aa12.83□□□□□ -0.36
CTSB-229ENST00000533572 PSG9Q00887 426 aa12.83□□□□□ -0.36
CTSB-229ENST00000533572 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.83□□□□□ -0.36
CTSB-229ENST00000533572 WFDC3Q8IUB2 231 aa12.83□□□□□ -0.36
CTSB-229ENST00000533572 C16orf92Q96LL3 132 aa12.83□□□□□ -0.36
CTSB-229ENST00000533572 RCHY1Q96PM5 261 aa12.83□□□□□ -0.36
CTSB-229ENST00000533572 TMEM167BQ9NRX6 74 aa12.83□□□□□ -0.36
CTSB-229ENST00000533572 NBEAP1P0C6P0 100 aa12.82□□□□□ -0.36
CTSB-229ENST00000533572 UBE2L3P68036 154 aaKnown RBP12.82□□□□□ -0.36
CTSB-229ENST00000533572 LYPD1Q8N2G4 141 aa12.82□□□□□ -0.36
CTSB-229ENST00000533572 FAM213BQ8TBF2 198 aa12.82□□□□□ -0.36
CTSB-229ENST00000533572 SRD5A3Q9H8P0 318 aa12.82□□□□□ -0.36
CTSB-229ENST00000533572 TRBV19A0A075B6N1 114 aa12.81□□□□□ -0.36
CTSB-229ENST00000533572 MAP1LC3B2A6NCE7 125 aa12.81□□□□□ -0.36
CTSB-229ENST00000533572 SOCS3O14543 225 aa12.81□□□□□ -0.36
CTSB-229ENST00000533572 H2AFB1P0C5Y9 115 aa12.81□□□□□ -0.36
CTSB-229ENST00000533572 PYYP10082 97 aa12.81□□□□□ -0.36
CTSB-229ENST00000533572 DEFB125Q8N687 156 aa12.81□□□□□ -0.36
CTSB-229ENST00000533572 MBD3L1Q8WWY6 194 aa12.81□□□□□ -0.36
CTSB-229ENST00000533572 FXYD5Q96DB9 178 aa12.81□□□□□ -0.36
CTSB-229ENST00000533572 MAP1LC3BQ9GZQ8 125 aa12.81□□□□□ -0.36
CTSB-229ENST00000533572 RYR3Q15413 4870 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 H3BQ15 152 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 IFNA7P01567 189 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 HBE1P02100 147 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 ARL14EPLP0DKL9 152 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 ZNF726P1Q15940 193 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 ALKAL2Q6UX46 152 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 SAT2Q96F10 170 aaPredicted RBP12.8□□□□□ -0.36
CTSB-229ENST00000533572 ZNF503Q96F45 646 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 SPATA25Q9BR10 227 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 WFDC10AQ9H1F0 79 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 AAMDCQ9H7C9 122 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 ZNF331Q9NQX6 463 aaPredicted RBP12.8□□□□□ -0.36
CTSB-229ENST00000533572 ZNF586Q9NXT0 402 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 PLA2G2EQ9NZK7 142 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 PRELID1Q9Y255 219 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 STAB2Q8WWQ8 2551 aa12.8□□□□□ -0.36
CTSB-229ENST00000533572 OR10J4P0C629 311 aa12.79□□□□□ -0.36
CTSB-229ENST00000533572 GCHFRP30047 84 aa12.79□□□□□ -0.36
CTSB-229ENST00000533572 PPT1P50897 306 aa12.79□□□□□ -0.36
CTSB-229ENST00000533572 BLOC1S1P78537 153 aa12.79□□□□□ -0.36
CTSB-229ENST00000533572 HAGHQ16775 308 aa12.79□□□□□ -0.36
CTSB-229ENST00000533572 FAM74A1Q5RGS3 127 aa12.79□□□□□ -0.36
CTSB-229ENST00000533572 TEX261Q6UWH6 196 aa12.79□□□□□ -0.36
CTSB-229ENST00000533572 SUN5Q8TC36 379 aa12.79□□□□□ -0.36
CTSB-229ENST00000533572 TM2D3Q9BRN9 247 aa12.79□□□□□ -0.36
CTSB-229ENST00000533572 TRAV1-1A0A0B4J248 108 aa12.78□□□□□ -0.36
CTSB-229ENST00000533572 HMGB3O15347 200 aaKnown RBP12.78□□□□□ -0.36
CTSB-229ENST00000533572 FHITP49789 147 aa12.78□□□□□ -0.36
CTSB-229ENST00000533572 SFT2D1Q8WV19 159 aa12.78□□□□□ -0.36
CTSB-229ENST00000533572 BLNKQ8WV28 456 aa12.78□□□□□ -0.36
CTSB-229ENST00000533572 MRPL53Q96EL3 112 aaKnown RBP12.78□□□□□ -0.36
CTSB-229ENST00000533572 C17orf77Q96MU5 243 aa12.78□□□□□ -0.36
CTSB-229ENST00000533572 MAP6D1Q9H9H5 199 aa12.78□□□□□ -0.36
CTSB-229ENST00000533572 ZNF705EA8MWA4 302 aaPredicted RBP12.77□□□□□ -0.37
CTSB-229ENST00000533572 ZNF688P0C7X2 276 aa12.77□□□□□ -0.37
CTSB-229ENST00000533572 ODF3L2Q3SX64 289 aa12.77□□□□□ -0.37
CTSB-229ENST00000533572 PSMG4Q5JS54 123 aa12.77□□□□□ -0.37
CTSB-229ENST00000533572 SSX7Q7RTT5 188 aa12.77□□□□□ -0.37
CTSB-229ENST00000533572 IQCF2Q8IXL9 164 aa12.77□□□□□ -0.37
CTSB-229ENST00000533572 NKX6-2Q9C056 277 aaPredicted RBP12.77□□□□□ -0.37
CTSB-229ENST00000533572 ARL2-SNX15V9GYD0 113 aa12.77□□□□□ -0.37
CTSB-229ENST00000533572 DEFB131AP59861 70 aa12.76□□□□□ -0.37
CTSB-229ENST00000533572 PSG3Q16557 428 aa12.76□□□□□ -0.37
CTSB-229ENST00000533572 ARL6IP6Q8N6S5 226 aa12.76□□□□□ -0.37
CTSB-229ENST00000533572 LINC00052Q96N35 136 aa12.76□□□□□ -0.37
CTSB-229ENST00000533572 TRAV8-2A0A0B4J237 113 aa12.75□□□□□ -0.37
CTSB-229ENST00000533572 A0A1W2PRE2 83 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms