RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 RHODO00212 210 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 LINC00205P59089 165 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 Q5PR19 223 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 PLA2G2CQ5R387 149 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 C14orf178Q8N769 122 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-219ENST00000528621 TMEM158Q8WZ71 300 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 NLRC5Q86WI3 1866 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 H3BUA1 57 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 SYS1-DBNDD2H3BUS1 97 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 ATP6V0E1O15342 81 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 SRSF2Q01130 221 aaKnown RBP6.85□□□□□ -1.31
CTNND1-219ENST00000528621 DMRTC2Q8IXT2 367 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-219ENST00000528621 RNF223E7ERA6 249 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-219ENST00000528621 PRR30Q53SZ7 412 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-219ENST00000528621 PRR31Q5SQ13 230 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 UBE2E2Q96LR5 201 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 F8WEM9 126 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 ARTNQ5T4W7 220 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 C8orf49Q96NF6 230 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 SIGMAR1Q99720 223 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 A0A0U1RRA0 63 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 A0A1W2PPI3 338 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 NDUFA4O00483 81 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 IGLV1-44P01699 117 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 IGKV1-16P04430 117 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 JPT2Q9H910 190 aa6.85□□□□□ -1.31
CTNND1-219ENST00000528621 SYNJ2BPP57105 145 aa6.84□□□□□ -1.31
CTNND1-219ENST00000528621 GUSBP1Q15486 140 aa6.84□□□□□ -1.31
CTNND1-219ENST00000528621 MCRIP2Q9BUT9 160 aaKnown RBP6.84□□□□□ -1.31
CTNND1-219ENST00000528621 Q96MF0 132 aa6.84□□□□□ -1.31
CTNND1-219ENST00000528621 THADAQ6YHU6 1953 aa6.84□□□□□ -1.31
CTNND1-219ENST00000528621 A0A087WWL8 130 aa6.84□□□□□ -1.31
CTNND1-219ENST00000528621 PAX4O43316 350 aa6.84□□□□□ -1.31
CTNND1-219ENST00000528621 PFN1P07737 140 aaKnown RBP6.84□□□□□ -1.31
CTNND1-219ENST00000528621 C17orf58Q2M2W7 97 aa6.84□□□□□ -1.31
CTNND1-219ENST00000528621 NEGR1Q7Z3B1 354 aa6.84□□□□□ -1.31
CTNND1-219ENST00000528621 LY6G5BQ8NDX9 201 aa6.84□□□□□ -1.31
CTNND1-219ENST00000528621 TIMM21Q9BVV7 248 aa6.84□□□□□ -1.31
CTNND1-219ENST00000528621 PROK2Q9HC23 129 aa6.84□□□□□ -1.31
CTNND1-219ENST00000528621 OVOL3O00110 214 aa6.84□□□□□ -1.32
CTNND1-219ENST00000528621 SMKR1H3BMG3 65 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 H3BRN7 92 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 LY6HO94772 140 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 Q8N8P6 123 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 DEFB104AQ8WTQ1 72 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 hDV102S1A0JD36 115 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 MEGF9Q9H1U4 602 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 NUP210Q8TEM1 1887 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-219ENST00000528621 CFHR2P36980 270 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 THAP8Q8NA92 274 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 DNAJC30Q96LL9 226 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 LIME1Q9H400 295 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 SCN2AQ99250 2005 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 BCL6BQ8N143 479 aaPredicted RBP6.83□□□□□ -1.32
CTNND1-219ENST00000528621 ANAPC13Q9BS18 74 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 IGKV1-6A0A0C4DH72 117 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 TNFRSF6BO95407 300 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 RIPPLY3P57055 190 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 FAM231DQ6ZW35 169 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 SLX1AQ9BQ83 275 aa6.83□□□□□ -1.32
CTNND1-219ENST00000528621 TRBV19A0A075B6N1 114 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 I3L3M4 83 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 DEFB131AP59861 70 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 MLANAQ16655 118 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 AMN1Q8IY45 258 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 DLX4Q92988 240 aaPredicted RBP6.82□□□□□ -1.32
CTNND1-219ENST00000528621 HS3ST6Q96QI5 342 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 ZNRD1Q9P1U0 126 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 TET1Q8NFU7 2136 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 C3orf79P0CE67 100 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 Q6ZRM9 215 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 GAGE2EQ4V326 116 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 C6orf226Q5I0X4 101 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 GAGE2DQ9UEU5 116 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 J3QKU1 62 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 LAMTOR3Q9UHA4 124 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 KIAA1671Q9BY89 1806 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 PTPRDP23468 1912 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 TRAV8-1A0A0A6YYK1 113 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 BOD1L2Q8IYS8 172 aa6.82□□□□□ -1.32
CTNND1-219ENST00000528621 SMIM27A0A1W2PRY6 76 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 DKK1O94907 266 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 IGLV3-1P01715 115 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 C1orf159Q96HA4 380 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 IGLV3-9A0A075B6K5 115 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 C15orf65H3BRN8 121 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 ESDP10768 282 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 F5P12259 2224 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 C1orf122Q6ZSJ8 110 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 WDR86Q86TI4 376 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 TMEM256Q8N2U0 113 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 SPANXDQ9BXN6 97 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 KAAG1Q9UBP8 84 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 APOC4P55056 127 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 SSBP2P81877 361 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-219ENST00000528621 MST1LQ2TV78 715 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 Q6ZR03 302 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 KLF12Q9Y4X4 402 aa6.81□□□□□ -1.32
CTNND1-219ENST00000528621 ARMS2P0C7Q2 107 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms