RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 FCGR2BP31994 310 aaPredicted RBP3.8□□□□□ -1.8
SVIP-202ENST00000525670 H2BFSP57053 126 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 DEFB131AP59861 70 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 RPP30P78346 268 aaKnown RBP3.8□□□□□ -1.8
SVIP-202ENST00000525670 FGL1Q08830 312 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 FCN2Q15485 313 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 LAMTOR1Q6IAA8 161 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 TMEM14EPQ6UXP3 125 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 NOXA1Q86UR1 476 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 BPIFCQ8NFQ6 507 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 THAP6Q8TBB0 222 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 MARC2Q969Z3 335 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 NARS2Q96I59 477 aaKnown RBP3.8□□□□□ -1.8
SVIP-202ENST00000525670 B9D2Q9BPU9 175 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 TECRQ9NZ01 308 aaKnown RBP3.8□□□□□ -1.8
SVIP-202ENST00000525670 MBD2Q9UBB5 411 aa3.8□□□□□ -1.8
SVIP-202ENST00000525670 TRAV30A0A087WSZ9 112 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 PIGBOS1A0A0B4J2F0 54 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 OR4C46A6NHA9 309 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 PMS2P5A8MQ11 134 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 TSPAN4O14817 238 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 PRAF2O60831 178 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 TSC22D2O75157 780 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 DEDDO75618 318 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 PTTG1O95997 202 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 CFC1BP0CG36 223 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 CFC1P0CG37 223 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 C8orf88P0DMB2 117 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 PVALBP20472 110 aaPredicted RBP3.79□□□□□ -1.8
SVIP-202ENST00000525670 FXYD7P58549 80 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 EWSR1Q01844 656 aaKnown RBP eCLIP3.79□□□□□ -1.8
SVIP-202ENST00000525670 DCTN2Q13561 401 aaKnown RBP3.79□□□□□ -1.8
SVIP-202ENST00000525670 HAGHQ16775 308 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 RGS21Q2M5E4 152 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 DEFB135Q30KP9 77 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 PSMG4Q5JS54 123 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 MIC13Q5XKP0 118 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 FAM122CQ6P4D5 195 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 SIGLEC15Q6ZMC9 328 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 CYP2G1PQ6ZSU1 146 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 STX12Q86Y82 276 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 THAP8Q8NA92 274 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 OR11H7Q8NGC8 314 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 OR10P1Q8NGE3 313 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 OR2K2Q8NGT1 345 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 PPP1R1CQ8WVI7 109 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 SMIM8Q96KF7 97 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 LINC00052Q96N35 136 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 RCHY1Q96PM5 261 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 RAB40CQ96S21 281 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 MGST2Q99735 147 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 SPAG8Q99932 426 aaPredicted RBP3.79□□□□□ -1.8
SVIP-202ENST00000525670 MARVELD1Q9BSK0 173 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 TMEM147Q9BVK8 224 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 ARL6Q9H0F7 186 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 MED28Q9H204 178 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 LYRM2Q9NU23 88 aaPredicted RBP3.79□□□□□ -1.8
SVIP-202ENST00000525670 SIGLEC8Q9NYZ4 499 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 ZMAT5Q9UDW3 170 aaKnown RBP3.79□□□□□ -1.8
SVIP-202ENST00000525670 RFNGQ9Y644 331 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 CSMD3Q7Z407 3707 aa3.79□□□□□ -1.8
SVIP-202ENST00000525670 FXYD6-FXYD2A0A087WZ82 144 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 SNRPGP15A8MWD9 76 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 F6UB75 175 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 K7EMT4 169 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 AGPAT2O15120 278 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 COX7A2P2O60397 106 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 CA1P00915 261 aaPredicted RBP3.78□□□□□ -1.8
SVIP-202ENST00000525670 CRYBB3P26998 211 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 HLA-DMBP28068 263 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 BMI1P35226 326 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 GPX4P36969 197 aaPredicted RBP3.78□□□□□ -1.8
SVIP-202ENST00000525670 EIF2B2P49770 351 aaKnown RBP3.78□□□□□ -1.8
SVIP-202ENST00000525670 YPEL3P61236 119 aaPredicted RBP3.78□□□□□ -1.8
SVIP-202ENST00000525670 DLK1P80370 383 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 GCSAMLQ5JQS6 135 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 ACTL10Q5JWF8 245 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 ZFAND6Q6FIF0 208 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 C16orf54Q6UWD8 224 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 OR8I2Q8N0Y5 310 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 RNF182Q8N6D2 247 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 TMEM252Q8N6L7 170 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 OR5C1Q8NGR4 320 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 GRAMD2BQ96HH9 432 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 TRGV9Q99603 122 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 GGTLC1Q9BX51 225 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 C11orf1Q9H5F2 150 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 TMEM231Q9H6L2 316 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 VSIRQ9H7M9 311 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 UQCC1Q9NVA1 299 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 CLEC5AQ9NY25 188 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 CACFD1Q9UGQ2 172 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 HIGD1AQ9Y241 93 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 U3KQK5 164 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 LYSTQ99698 3801 aa3.78□□□□□ -1.8
SVIP-202ENST00000525670 LOC102724200A0A096LPH7 203 aaPredicted RBP3.77□□□□□ -1.81
SVIP-202ENST00000525670 TRAV5A0A0B4J249 113 aa3.77□□□□□ -1.81
SVIP-202ENST00000525670 TRAV25A0A0B4J276 109 aa3.77□□□□□ -1.81
SVIP-202ENST00000525670 A0A1W2PS18 150 aa3.77□□□□□ -1.81
SVIP-202ENST00000525670 HELTA6NFD8 242 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms