RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 IGLC2P0DOY2 106 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 HIST1H1EP10412 219 aaKnown RBP3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 M6PRP20645 277 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 UBE2L3P68036 154 aaKnown RBP3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 PSG9Q00887 426 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 HIST1H1AQ02539 215 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 PDE6HQ13956 83 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 PSG3Q16557 428 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 RNF182Q8N6D2 247 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 HSD17B11Q8NBQ5 300 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 OR11H2Q8NH07 326 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 MUC7Q8TAX7 377 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 RPUSD4Q96CM3 377 aaKnown RBP3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 CLUHP3Q96NS8 147 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 RARRES2Q99969 163 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 OVOL2Q9BRP0 275 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 PAXXQ9BUH6 204 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 MFFQ9GZY8 342 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 ZNF331Q9NQX6 463 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 TNFSF18Q9UNG2 199 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 FUT9Q9Y231 359 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 PRELID1Q9Y255 219 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 GOLT1BQ9Y3E0 138 aa3.97□□□□□ -1.77
HMGB1P40-201ENST00000525121 TRBV19A0A075B6N1 114 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 TRAV8-2A0A0B4J237 113 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 TRAV5A0A0B4J249 113 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 KANTRA0A1W2PQU2 76 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 F6UB75 175 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 C3orf84H3BNL1 204 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 H3BTX0 84 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 MRPS12O15235 138 aaKnown RBP3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 PFDN1O60925 122 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 JTBO76095 146 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 C4BPBP20851 252 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 TSPOP30536 169 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 CSN1S1P47710 185 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 CNN1P51911 297 aaKnown RBP3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 EIF5AP63241 154 aaKnown RBP3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 SERF2P84101 59 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 GCSAMLQ5JQS6 135 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 FAM74A1Q5RGS3 127 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 MORN5Q5VZ52 161 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 IGFL4Q6B9Z1 124 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 FAM122CQ6P4D5 195 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 PQLC2Q6ZP29 291 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 MIR17HGQ75NE6 70 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 OR8A1Q8NGG7 326 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 OR10G4Q8NGN3 311 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 OR10G9Q8NGN4 311 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 OR10G7Q8NGN6 311 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 BLNKQ8WV28 456 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 RNF141Q8WVD5 230 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 MRPL53Q96EL3 112 aaKnown RBP3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 C20orf173Q96LM9 149 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 PSMG3Q9BT73 122 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 TMEM208Q9BTX3 173 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 SLC25A2Q9BXI2 301 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 OR51M1Q9H341 326 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 WFDC1Q9HC57 220 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 XCL2Q9UBD3 114 aa3.96□□□□□ -1.78
HMGB1P40-201ENST00000525121 IGHV3OR16-12A0A075B7B8 117 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 A0A0D9SG52 128 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 A0A0J9YWU9 116 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 RNF222A6NCQ9 220 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 CXorf65A6NEN9 183 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 H3BQ15 152 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 BOLA2-SMG1P6H3BVE0 249 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 SLC17A3O00476 420 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 INSP01308 110 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 SNRPCP09234 159 aaKnown RBP3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 OR10J4P0C629 311 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 NBEAP1P0C6P0 100 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 PYYP10082 97 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 MIFP14174 115 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 ATP6V0CP27449 155 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 LEPP41159 167 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 CDC34P49427 236 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 FXYD7P58549 80 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 DEFB1P60022 68 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 RAB2AP61019 212 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZNF345Q14585 488 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 Q5BKY6 102 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 AKR1C8PQ5T2L2 129 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 GDF5OSQ5U4N7 250 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 RPL7L1Q6DKI1 246 aaKnown RBP3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 AKAP14Q86UN6 197 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 IQCF2Q8IXL9 164 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 OR2G3Q8NGZ4 309 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 CMTM2Q8TAZ6 248 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 C17orf77Q96MU5 243 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 ARPC5LQ9BPX5 153 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 ACTR3CQ9C0K3 210 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 SLC35B3Q9H1N7 401 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 C11orf68Q9H3H3 251 aaKnown RBP3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 EDA2RQ9HAV5 297 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 ZNF586Q9NXT0 402 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 CMYA5Q8N3K9 4069 aa3.95□□□□□ -1.78
HMGB1P40-201ENST00000525121 hCG_2014768A0A024R1R8 64 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 TEX48A0A1B0GUV7 120 aa3.94□□□□□ -1.78
HMGB1P40-201ENST00000525121 TMEM189A5PLL7 270 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms