RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 GABARAPL1Q9H0R8 117 aa0.89□□□□□ -2.27
CD44-212ENST00000524922 OR51V1Q9H2C8 321 aa0.89□□□□□ -2.27
CD44-212ENST00000524922 EFCAB1Q9HAE3 211 aa0.89□□□□□ -2.27
CD44-212ENST00000524922 RPRMQ9NS64 109 aa0.89□□□□□ -2.27
CD44-212ENST00000524922 ARMC1Q9NVT9 282 aa0.89□□□□□ -2.27
CD44-212ENST00000524922 CMTM6Q9NX76 183 aa0.89□□□□□ -2.27
CD44-212ENST00000524922 RDH8Q9NYR8 311 aa0.89□□□□□ -2.27
CD44-212ENST00000524922 PLAC8Q9NZF1 115 aa0.89□□□□□ -2.27
CD44-212ENST00000524922 RBMX2Q9Y388 322 aaKnown RBP0.89□□□□□ -2.27
CD44-212ENST00000524922 PEX16Q9Y5Y5 336 aa0.89□□□□□ -2.27
CD44-212ENST00000524922 A0A087WWC5 75 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 A0A087X0K7 114 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 IGHV3-43A0A0B4J1X8 118 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 TRAV26-2A0A0B4J265 109 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 IGKV1-6A0A0C4DH72 117 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 LOC100506127A0A0U1RQW1 187 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 C5orf52A6NGY3 159 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 F5H768 121 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 UPK2O00526 184 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 SLC17A2O00624 439 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 NME4O00746 187 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 FABP7O15540 132 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 CRXO43186 299 aaPredicted RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 PSCAO43653 123 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 ZNF207O43670 478 aaKnown RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 GNG7O60262 68 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 SPINK4O60575 86 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 EDF1O60869 148 aaKnown RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 SERF1AO75920 110 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 ATG12O94817 140 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 CRYZL1O95825 349 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 IGHV3-7P01780 117 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 RLN2P04090 185 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 FABP1P07148 127 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 PFN1P07737 140 aaKnown RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 TRAPPC2P0DI81 140 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 TRAPPC2BP0DI82 140 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 IGHV3-43DP0DP04 118 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 GZMBP10144 247 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 PTHLHP12272 177 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 AREGP15514 252 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 PSMA1P25786 263 aaKnown RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 YAP1P46937 504 aaKnown RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 SUB1P53999 127 aaKnown RBP eCLIP0.88□□□□□ -2.27
CD44-212ENST00000524922 PRR3P79522 188 aaKnown RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 QRFPP83859 136 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 ZNF85Q03923 595 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 SCN1BQ07699 218 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 GINS1Q14691 196 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 ELOBQ15370 118 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 RAB11BQ15907 218 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 LTC4SQ16873 150 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 PSMG4Q5JS54 123 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 IDNKQ5T6J7 187 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 DDI2Q5TDH0 399 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 GPR107Q5VW38 600 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 GLYATQ6IB77 296 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 LYPD5Q6UWN5 251 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 SIGLEC15Q6ZMC9 328 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 TMEM182Q6ZP80 229 aaPredicted RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 AHSA2Q719I0 299 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 KCTD9Q7L273 389 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 TMEM144Q7Z5S9 345 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 C9orf163Q8N9P6 203 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 SPC24Q8NBT2 197 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 BPIFCQ8NFQ6 507 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 OR56B1Q8NGI3 324 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 OR5D18Q8NGL1 313 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 OR6M1Q8NGM8 313 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 OR10G4Q8NGN3 311 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 OR4K15Q8NH41 348 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 OR5AK2Q8NH90 309 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 RNASEH2CQ8TDP1 164 aaKnown RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 NEK7Q8TDX7 302 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 GIPC3Q8TF64 312 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 PTH2Q96A98 100 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 CENPNQ96H22 339 aaPredicted RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 PPP1R36Q96LQ0 422 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 Q96MT0 163 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 GPER1Q99527 375 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 APOL4Q9BPW4 351 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 PDCD1LG2Q9BQ51 273 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 C7orf50Q9BRJ6 194 aaKnown RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 C20orf24Q9BUV8 137 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 GABARAPL3Q9BY60 117 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 MRPL32Q9BYC8 188 aaKnown RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 OR2D2Q9H210 308 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 OR51M1Q9H341 326 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 DPH3P1Q9H4G8 78 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 ZNF331Q9NQX6 463 aaPredicted RBP0.88□□□□□ -2.27
CD44-212ENST00000524922 DIABLOQ9NR28 239 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 SAR1AQ9NR31 198 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 LINC00846Q9NV44 126 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 XCL2Q9UBD3 114 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 N6AMT1Q9Y5N5 214 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 KMT2DO14686 5537 aa0.88□□□□□ -2.27
CD44-212ENST00000524922 IGLV8-61A0A075B6I0 122 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 A0A0A6YYH2 397 aa0.87□□□□□ -2.27
CD44-212ENST00000524922 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.87□□□□□ -2.27
CD44-212ENST00000524922 TRAV8-6A0A0B4J262 113 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms