RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, human

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS13B-211	ENST00000522802	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS13B-211	ENST00000522802	PBDC1	Q9BVG4	233 aa		4.2	□□□□□ -1.74
VPS13B-211	ENST00000522802	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS13B-211	ENST00000522802	EHF	Q9NZC4	300 aa		4.2	□□□□□ -1.74
VPS13B-211	ENST00000522802	DAPK2	Q9UIK4	370 aa		4.2	□□□□□ -1.74
VPS13B-211	ENST00000522802	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.2	□□□□□ -1.74
VPS13B-211	ENST00000522802	TRAV1-2	A0A0B4J238	106 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	PMS2P5	A8MQ11	134 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	SMIM1	B2RUZ4	78 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	BOLA2-SMG1P6	H3BVE0	249 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	GPR31	O00270	319 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	ETV6	P41212	452 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	RANBP1	P43487	201 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	RPL5	P46777	297 aa	Known RBP	4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	TAS2R60	P59551	318 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	MLLT11	Q13015	90 aa	Predicted RBP	4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	TMEM144	Q7Z5S9	345 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	TMED4	Q7Z7H5	227 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	WFDC10B	Q8IUB3	73 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	CMTM1	Q8IZ96	169 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	ARRDC1	Q8N5I2	433 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	RNF182	Q8N6D2	247 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	ARL6IP6	Q8N6S5	226 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	STPG4	Q8N801	248 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802		Q8N814	137 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	TMEM263	Q8WUH6	116 aa	Known RBP	4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	BORCS5	Q969J3	196 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	SGK494	Q96LW2	274 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	LINC01587	Q99440	93 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	LINC00467	Q9BRT7	94 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	CCDC90B	Q9GZT6	254 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	ACOT13	Q9NPJ3	140 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	RPRM	Q9NS64	109 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	RHBDL2	Q9NX52	303 aa		4.19	□□□□□ -1.74
VPS13B-211	ENST00000522802	TRAV18	A0A075B6X5	111 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802		A0A0G2JRQ6	117 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	PMP2	P02689	132 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	C1QB	P02746	253 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	CFC1B	P0CG36	223 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	CFC1	P0CG37	223 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	RD3L	P0DJH9	198 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	MYL9	P24844	172 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	UCP1	P25874	307 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	SUPT4H1	P63272	117 aa	Known RBP	4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	GFI1B	Q5VTD9	330 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	C22orf42	Q6IC83	251 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	DHRSX	Q8N5I4	330 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	ACY3	Q96HD9	319 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	S100A14	Q9HCY8	104 aa		4.18	□□□□□ -1.74
VPS13B-211	ENST00000522802	TRAV8-2	A0A0B4J237	113 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	CIDEA	O60543	219 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	SCGN	O76038	276 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	RLN2	P04090	185 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	SLC25A4	P12235	298 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	PSMB9	P28065	219 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	SUB1	P53999	127 aa	Known RBP eCLIP	4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	B2M	P61769	119 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	WFDC2	Q14508	124 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	LINC01620	Q4KN68	170 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	LCE1E	Q5T753	118 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	OR8G2P	Q6IF36	304 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	SFXN4	Q6P4A7	337 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	DHRS11	Q6UWP2	260 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802		Q6ZTI0	123 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	GPR141	Q7Z602	305 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	TMEM256	Q8N2U0	113 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	OR5H6	Q8NGV6	325 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	AUNIP	Q9H7T9	357 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	FAM212B	Q9NTI7	297 aa	Predicted RBP	4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	LY96	Q9Y6Y9	160 aa		4.17	□□□□□ -1.74
VPS13B-211	ENST00000522802	IGKV1D-37	A0A075B6S9	117 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	ZNF98	A6NK75	572 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	RS1	O15537	224 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	PSCA	O43653	123 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	ADAP1	O75689	374 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	GAS8-AS1	O95177	125 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	NUP62	P37198	522 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	HTR2B	P41595	481 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	CBX5	P45973	191 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	AKR1C2	P52895	323 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	TAS2R20	P59543	309 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	LYZ	P61626	148 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	ZNF90	Q03938	601 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	C1orf194	Q5T5A4	169 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	IL22RA2	Q969J5	263 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	TP53RK	Q96S44	253 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	MGLL	Q99685	303 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	PDCD10	Q9BUL8	212 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	ENY2	Q9NPA8	101 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	IFT46	Q9NQC8	304 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	NDUFB11	Q9NX14	153 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	ANAPC10	Q9UM13	185 aa		4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	RRP15	Q9Y3B9	282 aa	Known RBP	4.16	□□□□□ -1.74
VPS13B-211	ENST00000522802	DUSP14	O95147	198 aa	Known RBP	4.15	□□□□□ -1.75
VPS13B-211	ENST00000522802	HRH1	P35367	487 aa		4.15	□□□□□ -1.75
VPS13B-211	ENST00000522802	MEOX2	P50222	304 aa		4.15	□□□□□ -1.75
VPS13B-211	ENST00000522802	HIST1H1A	Q02539	215 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS13B-211	ENST00000522802	C2orf83	Q53S99	150 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms