RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 Q8NAQ8 132 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 IL1F10Q8WWZ1 152 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 EEF1AKMT3Q96AZ1 226 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 C18orf15Q96N68 181 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 AGMATQ9BSE5 352 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 FAAP24Q9BTP7 215 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 TMEM208Q9BTX3 173 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 NMES1Q9C002 83 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 CTDSP1Q9GZU7 261 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 DAZ1Q9NQZ3 744 aaKnown RBP3.54□□□□□ -1.84
SDCBP-207ENST00000520168 EHFQ9NZC4 300 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 ZNF581Q9P0T4 197 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 AK3Q9UIJ7 227 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 ANXA10Q9UJ72 324 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 C14orf166Q9Y224 244 aaKnown RBP3.54□□□□□ -1.84
SDCBP-207ENST00000520168 V9GYY9 64 aa3.54□□□□□ -1.84
SDCBP-207ENST00000520168 FXYD6-FXYD2A0A087WZ82 144 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 TRBV6-6A0A0A6YYG2 114 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 C20orf202A1L168 122 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 NPIPB5A8MRT5 1133 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 M0R143 59 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 CHEK1O14757 476 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 SIVA1O15304 175 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 PDE6DO43924 150 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 SIX6O95475 246 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 FCGR3AP08637 254 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 HOXB5P09067 269 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 RBMY1A1P0DJD3 496 aaKnown RBP3.53□□□□□ -1.84
SDCBP-207ENST00000520168 PGAM2P15259 253 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 CXCL2P19875 107 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 NPY1RP25929 384 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 RAB5CP51148 216 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 CAV2P51636 162 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 LINC00205P59089 165 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 PLP1P60201 277 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 PPP1R1AQ13522 171 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 OR2F1Q13607 317 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 PRSS8Q16651 343 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 RTL8BQ17RB0 113 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 CLLU1Q5K131 121 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 SAMD13Q5VXD3 122 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 CLEC19AQ6UXS0 136 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 GSG1LQ6UXU4 331 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 TMUB2Q71RG4 321 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 TCF24Q7RTU0 167 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 STHQ8IWL8 128 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 MMD2Q8IY49 270 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 ZNF383Q8NA42 475 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 OR5B3Q8NH48 314 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 OSR1Q8TAX0 266 aaPredicted RBP3.53□□□□□ -1.84
SDCBP-207ENST00000520168 THAP6Q8TBB0 222 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 ABHD14BQ96IU4 210 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 BTF3L4Q96K17 158 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 CXorf58Q96LI9 332 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 C2orf50Q96LR7 162 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 RTBDNQ9BSG5 229 aaPredicted RBP3.53□□□□□ -1.84
SDCBP-207ENST00000520168 FXYD6Q9H0Q3 95 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 HSPB7Q9UBY9 170 aa3.53□□□□□ -1.84
SDCBP-207ENST00000520168 RBM7Q9Y580 266 aaKnown RBP3.53□□□□□ -1.84
SDCBP-207ENST00000520168 IGLV2-18A0A075B6J9 118 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 A0A087X0K7 114 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 TRBV6-7A0A0A0MS04 114 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 TRAV14DV4A0A0A6YYC5 116 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 TGIF2-C20orf24A0A0A6YYL0 155 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 CGB1A6NKQ9 187 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 ZNF705EA8MWA4 302 aaPredicted RBP3.52□□□□□ -1.85
SDCBP-207ENST00000520168 DEFB4AO15263 64 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 EIF3GO75821 320 aaKnown RBP eCLIP3.52□□□□□ -1.85
SDCBP-207ENST00000520168 MPC2O95563 127 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 NAPSAO96009 420 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 PRH1P02810 166 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 RLN2P04090 185 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 APELAP0DMC3 54 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 BTN1A1Q13410 526 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 ZNF345Q14585 488 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 KLK9Q2XQG4 91 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 SERTAD4-AS1Q5TG53 156 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 AADACL3Q5VUY0 350 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 MORN3Q6PF18 240 aaPredicted RBP3.52□□□□□ -1.85
SDCBP-207ENST00000520168 TBC1D26Q86UD7 250 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 COMMD7Q86VX2 200 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 KCNRGQ8N5I3 272 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 OR4A4PQ8NGN8 299 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 PPP1R1CQ8WVI7 109 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 TMEM190Q8WZ59 177 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 FRZBQ92765 325 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 TMEM230Q96A57 120 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 PHYHIPLQ96FC7 376 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 SEC22AQ96IW7 307 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 ADTRPQ96IZ2 230 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 ARL6Q9H0F7 186 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 MED9Q9NWA0 146 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 THYN1Q9P016 225 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 KLK9Q9UKQ9 250 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 SLC45A2Q9UMX9 530 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 TNFSF18Q9UNG2 199 aa3.52□□□□□ -1.85
SDCBP-207ENST00000520168 FAT1Q14517 4588 aa3.51□□□□□ -1.85
SDCBP-207ENST00000520168 IGHV4-28A0A0C4DH34 117 aa3.51□□□□□ -1.85
SDCBP-207ENST00000520168 TEX48A0A1B0GUV7 120 aa3.51□□□□□ -1.85
SDCBP-207ENST00000520168 KANTRA0A1W2PQU2 76 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms