RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 ST6GAL2Q96JF0 529 aa16.64■□□□□ 0.25
SKP1-206ENST00000519321 RCHY1Q96PM5 261 aa16.64■□□□□ 0.25
SKP1-206ENST00000519321 SAV1Q9H4B6 383 aaPredicted RBP16.64■□□□□ 0.25
SKP1-206ENST00000519321 HLA-DRB4X5D2U9 266 aa16.64■□□□□ 0.25
SKP1-206ENST00000519321 DNAH9Q9NYC9 4486 aa16.63■□□□□ 0.25
SKP1-206ENST00000519321 TRAV8-2A0A0B4J237 113 aa16.63■□□□□ 0.25
SKP1-206ENST00000519321 A0A0D9SG52 128 aa16.63■□□□□ 0.25
SKP1-206ENST00000519321 MBP02144 154 aa16.63■□□□□ 0.25
SKP1-206ENST00000519321 HIST1H1EP10412 219 aaKnown RBP16.63■□□□□ 0.25
SKP1-206ENST00000519321 TAS2R45P59539 299 aa16.63■□□□□ 0.25
SKP1-206ENST00000519321 TMEM41BQ5BJD5 291 aa16.63■□□□□ 0.25
SKP1-206ENST00000519321 MIR17HGQ75NE6 70 aa16.63■□□□□ 0.25
SKP1-206ENST00000519321 KCNRGQ8N5I3 272 aa16.63■□□□□ 0.25
SKP1-206ENST00000519321 OR11H4Q8NGC9 324 aa16.63■□□□□ 0.25
SKP1-206ENST00000519321 ZNF331Q9NQX6 463 aaPredicted RBP16.63■□□□□ 0.25
SKP1-206ENST00000519321 TP53TG1Q9Y2A0 90 aa16.63■□□□□ 0.25
SKP1-206ENST00000519321 H3BMM0 161 aa16.62■□□□□ 0.25
SKP1-206ENST00000519321 ZNF253O75346 499 aa16.62■□□□□ 0.25
SKP1-206ENST00000519321 NUTF2P61970 127 aaKnown RBP16.62■□□□□ 0.25
SKP1-206ENST00000519321 C20orf173Q96LM9 149 aa16.62■□□□□ 0.25
SKP1-206ENST00000519321 SLC25A2Q9BXI2 301 aa16.62■□□□□ 0.25
SKP1-206ENST00000519321 A0A1W2PPV4 95 aa16.61■□□□□ 0.25
SKP1-206ENST00000519321 H3BQ15 152 aa16.61■□□□□ 0.25
SKP1-206ENST00000519321 PDE6HQ13956 83 aa16.61■□□□□ 0.25
SKP1-206ENST00000519321 PSG3Q16557 428 aa16.61■□□□□ 0.25
SKP1-206ENST00000519321 SAT2Q96F10 170 aaPredicted RBP16.61■□□□□ 0.25
SKP1-206ENST00000519321 FAM167A-AS1Q96KT0 104 aa16.61■□□□□ 0.25
SKP1-206ENST00000519321 CLUHP3Q96NS8 147 aa16.61■□□□□ 0.25
SKP1-206ENST00000519321 ARPC5LQ9BPX5 153 aa16.61■□□□□ 0.25
SKP1-206ENST00000519321 OR51M1Q9H341 326 aa16.61■□□□□ 0.25
SKP1-206ENST00000519321 TGP01266 2768 aa16.61■□□□□ 0.25
SKP1-206ENST00000519321 hCG_2014768A0A024R1R8 64 aa16.6■□□□□ 0.25
SKP1-206ENST00000519321 KHDC3LQ587J8 217 aa16.6■□□□□ 0.25
SKP1-206ENST00000519321 AKAP14Q86UN6 197 aa16.6■□□□□ 0.25
SKP1-206ENST00000519321 RNF182Q8N6D2 247 aa16.6■□□□□ 0.25
SKP1-206ENST00000519321 ZNF738Q8NE65 137 aa16.6■□□□□ 0.25
SKP1-206ENST00000519321 OR10G4Q8NGN3 311 aa16.6■□□□□ 0.25
SKP1-206ENST00000519321 OR10G9Q8NGN4 311 aa16.6■□□□□ 0.25
SKP1-206ENST00000519321 OR10G7Q8NGN6 311 aa16.6■□□□□ 0.25
SKP1-206ENST00000519321 PAXXQ9BUH6 204 aa16.6■□□□□ 0.25
SKP1-206ENST00000519321 ZNF586Q9NXT0 402 aa16.6■□□□□ 0.25
SKP1-206ENST00000519321 RFNGQ9Y644 331 aa16.6■□□□□ 0.25
SKP1-206ENST00000519321 TRBV19A0A075B6N1 114 aa16.59■□□□□ 0.25
SKP1-206ENST00000519321 A0A0J9YX75 114 aa16.59■□□□□ 0.25
SKP1-206ENST00000519321 DUSP14O95147 198 aaKnown RBP16.59■□□□□ 0.25
SKP1-206ENST00000519321 CA1P00915 261 aaPredicted RBP16.59■□□□□ 0.25
SKP1-206ENST00000519321 SNRPCP09234 159 aaKnown RBP16.59■□□□□ 0.25
SKP1-206ENST00000519321 PSG9Q00887 426 aa16.59■□□□□ 0.25
SKP1-206ENST00000519321 IGFL4Q6B9Z1 124 aa16.59■□□□□ 0.25
SKP1-206ENST00000519321 KANTRA0A1W2PQU2 76 aa16.58■□□□□ 0.24
SKP1-206ENST00000519321 SPRY2O43597 315 aa16.58■□□□□ 0.24
SKP1-206ENST00000519321 OR7C2O60412 319 aa16.58■□□□□ 0.24
SKP1-206ENST00000519321 PYYP10082 97 aa16.58■□□□□ 0.24
SKP1-206ENST00000519321 RAB2AP61019 212 aa16.58■□□□□ 0.24
SKP1-206ENST00000519321 DEFB135Q30KP9 77 aa16.58■□□□□ 0.24
SKP1-206ENST00000519321 GDF5OSQ5U4N7 250 aa16.58■□□□□ 0.24
SKP1-206ENST00000519321 RNF183Q96D59 192 aa16.58■□□□□ 0.24
SKP1-206ENST00000519321 C1QTNF4Q9BXJ3 329 aa16.58■□□□□ 0.24
SKP1-206ENST00000519321 CYTL1Q9NRR1 136 aa16.58■□□□□ 0.24
SKP1-206ENST00000519321 H3BTX0 84 aa16.57■□□□□ 0.24
SKP1-206ENST00000519321 SLC17A3O00476 420 aa16.57■□□□□ 0.24
SKP1-206ENST00000519321 NBEAP1P0C6P0 100 aa16.57■□□□□ 0.24
SKP1-206ENST00000519321 FAM122CQ6P4D5 195 aa16.57■□□□□ 0.24
SKP1-206ENST00000519321 OR4B1Q8NGF8 309 aa16.57■□□□□ 0.24
SKP1-206ENST00000519321 RNF141Q8WVD5 230 aa16.57■□□□□ 0.24
SKP1-206ENST00000519321 OVOL2Q9BRP0 275 aa16.57■□□□□ 0.24
SKP1-206ENST00000519321 SH3BGRL3Q9H299 93 aa16.57■□□□□ 0.24
SKP1-206ENST00000519321 RETNQ9HD89 108 aa16.57■□□□□ 0.24
SKP1-206ENST00000519321 F6UB75 175 aa16.56■□□□□ 0.24
SKP1-206ENST00000519321 C1QBP02746 253 aa16.56■□□□□ 0.24
SKP1-206ENST00000519321 DEFB1P60022 68 aa16.56■□□□□ 0.24
SKP1-206ENST00000519321 EIF5AP63241 154 aaKnown RBP16.56■□□□□ 0.24
SKP1-206ENST00000519321 PQLC2Q6ZP29 291 aa16.56■□□□□ 0.24
SKP1-206ENST00000519321 BLNKQ8WV28 456 aa16.56■□□□□ 0.24
SKP1-206ENST00000519321 RPUSD4Q96CM3 377 aaKnown RBP16.56■□□□□ 0.24
SKP1-206ENST00000519321 AAMDCQ9H7C9 122 aa16.56■□□□□ 0.24
SKP1-206ENST00000519321 PRELID1Q9Y255 219 aa16.56■□□□□ 0.24
SKP1-206ENST00000519321 AGRNO00468 2067 aa16.55■□□□□ 0.24
SKP1-206ENST00000519321 BCL2L11O43521 198 aa16.55■□□□□ 0.24
SKP1-206ENST00000519321 HLA-DMBP28068 263 aa16.55■□□□□ 0.24
SKP1-206ENST00000519321 CDC34P49427 236 aaPredicted RBP16.55■□□□□ 0.24
SKP1-206ENST00000519321 FXYD5Q96DB9 178 aa16.55■□□□□ 0.24
SKP1-206ENST00000519321 MRPL53Q96EL3 112 aaKnown RBP16.55■□□□□ 0.24
SKP1-206ENST00000519321 HYLS1Q96M11 299 aa16.55■□□□□ 0.24
SKP1-206ENST00000519321 PFDN1O60925 122 aa16.54■□□□□ 0.24
SKP1-206ENST00000519321 OR10J4P0C629 311 aa16.54■□□□□ 0.24
SKP1-206ENST00000519321 UBE2L3P68036 154 aaKnown RBP16.54■□□□□ 0.24
SKP1-206ENST00000519321 RPP25LQ8N5L8 163 aaKnown RBP16.54■□□□□ 0.24
SKP1-206ENST00000519321 OR8A1Q8NGG7 326 aa16.54■□□□□ 0.24
SKP1-206ENST00000519321 WWC2-AS2Q96NR7 200 aa16.54■□□□□ 0.24
SKP1-206ENST00000519321 ACTR3CQ9C0K3 210 aaPredicted RBP16.54■□□□□ 0.24
SKP1-206ENST00000519321 A8MTW9 85 aa16.53■□□□□ 0.24
SKP1-206ENST00000519321 NDUFB4O95168 129 aa16.53■□□□□ 0.24
SKP1-206ENST00000519321 IGKV3-20P01619 116 aa16.53■□□□□ 0.24
SKP1-206ENST00000519321 TMUB2Q71RG4 321 aa16.53■□□□□ 0.24
SKP1-206ENST00000519321 ZNF471Q9BX82 626 aaPredicted RBP16.53■□□□□ 0.24
SKP1-206ENST00000519321 COL7A1Q02388 2944 aa16.52■□□□□ 0.24
SKP1-206ENST00000519321 GIG44P09565 113 aaPredicted RBP16.52■□□□□ 0.24
SKP1-206ENST00000519321 C4BPBP20851 252 aa16.52■□□□□ 0.24
SKP1-206ENST00000519321 CNN1P51911 297 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms