RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SAMD13Q5VXD3 122 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 PHF5AQ7RTV0 110 aaKnown RBP0.94□□□□□ -2.26
SQLE-202ENST00000518604 DYDC1Q8WWB3 177 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 BORCS8Q96FH0 119 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 PRADC1Q9BSG0 188 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 MED31Q9Y3C7 131 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 NUBP2Q9Y5Y2 271 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 BCL9O00512 1426 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 ARHGEF10O15013 1369 aa0.94□□□□□ -2.26
SQLE-202ENST00000518604 TRAPPC8Q9Y2L5 1435 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 TRAV3A0A0B4J244 114 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 ZNF736B4DX44 427 aaPredicted RBP0.93□□□□□ -2.26
SQLE-202ENST00000518604 E7EQ34 232 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 NDUFB3O43676 98 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 GGCTO75223 188 aaKnown RBP0.93□□□□□ -2.26
SQLE-202ENST00000518604 IFNA14P01570 189 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 APOA2P02652 100 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 SRP14P37108 136 aaKnown RBP0.93□□□□□ -2.26
SQLE-202ENST00000518604 ROMO1P60602 79 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 MPV17LQ2QL34 196 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 DEFB113Q30KQ7 82 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 TMEM35BQ8NCS4 154 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 LINC00467Q9BRT7 94 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 TMEM70Q9BUB7 260 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 C6orf62Q9GZU0 229 aaPredicted RBP0.93□□□□□ -2.26
SQLE-202ENST00000518604 BCL2L10Q9HD36 194 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 MED11Q9P086 117 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 EXPH5Q8NEV8 1989 aa0.93□□□□□ -2.26
SQLE-202ENST00000518604 TCOF1Q13428 1488 aaKnown RBP0.92□□□□□ -2.26
SQLE-202ENST00000518604 FER1L6Q2WGJ9 1857 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 A0A1B0GX51 115 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 BCL2P10415 239 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 HLA-EP13747 358 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 S100A11P31949 105 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 RPS28P62857 69 aaKnown RBP0.92□□□□□ -2.26
SQLE-202ENST00000518604 OR8B8Q15620 311 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 BCL2L15Q5TBC7 163 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 ANGPTL5Q86XS5 388 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 SLC30A7Q8NEW0 376 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 OR9Q1Q8NGQ5 310 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 PPTC7Q8NI37 304 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 SLC25A21Q9BQT8 299 aaPredicted RBP0.92□□□□□ -2.26
SQLE-202ENST00000518604 CCDC32Q9BV29 185 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 NPCDR1Q9BY65 106 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 POPDC3Q9HBV1 291 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 HSPB11Q9Y547 144 aa0.92□□□□□ -2.26
SQLE-202ENST00000518604 BICRAQ9NZM4 1560 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 ARHGEF11O15085 1522 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 PLXNA4Q9HCM2 1894 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 MYO5AQ9Y4I1 1855 aaKnown RBP0.91□□□□□ -2.26
SQLE-202ENST00000518604 TRAV36DV7A0A075B6V5 113 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 TRGV10A0A0A0MS01 117 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 TRAV5A0A0B4J249 113 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 TRBV7-6A0A0J9YX20 115 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 A0A1B0GW64 132 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 TIMM17BO60830 172 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 GADD45GO95257 159 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 TMBIM6P55061 237 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 HBBP68871 147 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 PSG9Q00887 426 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 EIF3IQ13347 325 aaKnown RBP0.91□□□□□ -2.26
SQLE-202ENST00000518604 TEX261Q6UWH6 196 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 YPEL2Q96QA6 119 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 OR2H1Q9GZK4 316 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 BATF3Q9NR55 127 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 CDC42SE1Q9NRR8 79 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 NAT8BQ9UHF3 227 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 TRAPPC2LQ9UL33 140 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 U3KQ87 197 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 RTL9Q8NET4 1388 aa0.91□□□□□ -2.26
SQLE-202ENST00000518604 FAM135BQ49AJ0 1406 aa0.9□□□□□ -2.26
SQLE-202ENST00000518604 LOC107984640A0A0U1RRK4 108 aa0.9□□□□□ -2.27
SQLE-202ENST00000518604 CCDC160A6NGH7 325 aa0.9□□□□□ -2.27
SQLE-202ENST00000518604 J3KT08 172 aa0.9□□□□□ -2.27
SQLE-202ENST00000518604 DEGS1O15121 323 aa0.9□□□□□ -2.27
SQLE-202ENST00000518604 DHFRP00374 187 aa0.9□□□□□ -2.27
SQLE-202ENST00000518604 S100A12P80511 92 aa0.9□□□□□ -2.27
SQLE-202ENST00000518604 TMEM254Q8TBM7 123 aa0.9□□□□□ -2.27
SQLE-202ENST00000518604 SKA2Q8WVK7 121 aaPredicted RBP0.9□□□□□ -2.27
SQLE-202ENST00000518604 DIRC1Q969H9 104 aa0.9□□□□□ -2.27
SQLE-202ENST00000518604 NIT2Q9NQR4 276 aa0.9□□□□□ -2.27
SQLE-202ENST00000518604 MYH10P35580 1976 aa0.9□□□□□ -2.27
SQLE-202ENST00000518604 NOTCH1P46531 2555 aa0.9□□□□□ -2.27
SQLE-202ENST00000518604 OVOS2A0A0G2JMS6 1433 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 TNS3Q68CZ2 1445 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 COL24A1Q17RW2 1714 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 TAF1LQ8IZX4 1826 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 IGHV1-58A0A0C4DH39 117 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 A8MWV9 139 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 HIST1H2BKO60814 126 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 FAM107AO95990 144 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 HIST1H2BJP06899 126 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 SDC4P31431 198 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 PSPHP78330 225 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 C1orf134Q5TEV5 83 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 KRTAP26-1Q6PEX3 210 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 TMEM229BQ8NBD8 167 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 CCL4L1Q8NHW4 92 aa0.89□□□□□ -2.27
SQLE-202ENST00000518604 POP5Q969H6 163 aaKnown RBP0.89□□□□□ -2.27
SQLE-202ENST00000518604 ISOC1Q96CN7 298 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms