RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 DIRC3C9JPN6 131 aa20.54■□□□□ 0.88
COL13A1-210ENST00000517713 FRMD6-AS1P0C7T7 363 aa20.54■□□□□ 0.88
COL13A1-210ENST00000517713 IGHV4-31P0DP07 118 aa20.54■□□□□ 0.88
COL13A1-210ENST00000517713 S100A2P29034 98 aa20.54■□□□□ 0.88
COL13A1-210ENST00000517713 PPIFP30405 207 aaKnown RBP20.54■□□□□ 0.88
COL13A1-210ENST00000517713 COA6Q5JTJ3 125 aaKnown RBP20.54■□□□□ 0.88
COL13A1-210ENST00000517713 ZNF492Q9P255 531 aa20.54■□□□□ 0.88
COL13A1-210ENST00000517713 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.54■□□□□ 0.88
COL13A1-210ENST00000517713 IZUMO1RA6ND01 250 aa20.54■□□□□ 0.88
COL13A1-210ENST00000517713 SLC35B1P78383 322 aa20.54■□□□□ 0.88
COL13A1-210ENST00000517713 LINC00322Q6ZN03 302 aaPredicted RBP20.54■□□□□ 0.88
COL13A1-210ENST00000517713 H3BUA1 57 aa20.53■□□□□ 0.88
COL13A1-210ENST00000517713 M0R3E3 92 aa20.53■□□□□ 0.88
COL13A1-210ENST00000517713 BRI3O95415 125 aa20.53■□□□□ 0.88
COL13A1-210ENST00000517713 RAB9AP51151 201 aa20.53■□□□□ 0.88
COL13A1-210ENST00000517713 TPPP2P59282 170 aa20.53■□□□□ 0.88
COL13A1-210ENST00000517713 Q6ZS46 218 aa20.53■□□□□ 0.88
COL13A1-210ENST00000517713 GNB1LQ9BYB4 327 aa20.53■□□□□ 0.88
COL13A1-210ENST00000517713 MRPL18Q9H0U6 180 aaKnown RBP20.53■□□□□ 0.88
COL13A1-210ENST00000517713 CSMD2Q7Z408 3487 aa20.53■□□□□ 0.88
COL13A1-210ENST00000517713 CLPSL1A2RUU4 121 aa20.53■□□□□ 0.88
COL13A1-210ENST00000517713 C19orf71A6NCJ1 209 aa20.52■□□□□ 0.88
COL13A1-210ENST00000517713 SNURFLB1AK76 121 aa20.52■□□□□ 0.88
COL13A1-210ENST00000517713 PSG3Q16557 428 aa20.52■□□□□ 0.88
COL13A1-210ENST00000517713 BUB3O43684 328 aa20.51■□□□□ 0.87
COL13A1-210ENST00000517713 CSN1S1P47710 185 aa20.51■□□□□ 0.87
COL13A1-210ENST00000517713 CIARTQ8N365 385 aaPredicted RBP20.51■□□□□ 0.87
COL13A1-210ENST00000517713 TSKUQ8WUA8 353 aa20.51■□□□□ 0.87
COL13A1-210ENST00000517713 PRSS22Q9GZN4 317 aa20.51■□□□□ 0.87
COL13A1-210ENST00000517713 IGHV4-59P01825 116 aa20.51■□□□□ 0.87
COL13A1-210ENST00000517713 COX19Q49B96 90 aa20.51■□□□□ 0.87
COL13A1-210ENST00000517713 WDR73Q6P4I2 378 aa20.51■□□□□ 0.87
COL13A1-210ENST00000517713 DAZAP1Q96EP5 407 aaKnown RBP20.51■□□□□ 0.87
COL13A1-210ENST00000517713 RPP21Q9H633 154 aaKnown RBP20.51■□□□□ 0.87
COL13A1-210ENST00000517713 PSG8Q9UQ74 426 aa20.51■□□□□ 0.87
COL13A1-210ENST00000517713 ZFP30Q9Y2G7 519 aa20.51■□□□□ 0.87
COL13A1-210ENST00000517713 ZNF253O75346 499 aa20.5■□□□□ 0.87
COL13A1-210ENST00000517713 P01737 135 aa20.5■□□□□ 0.87
COL13A1-210ENST00000517713 NAT8BQ9UHF3 227 aa20.5■□□□□ 0.87
COL13A1-210ENST00000517713 MAP1AP78559 2803 aaPredicted RBP20.5■□□□□ 0.87
COL13A1-210ENST00000517713 PRB4P10163 310 aaPredicted RBP20.49■□□□□ 0.87
COL13A1-210ENST00000517713 MRPL54Q6P161 138 aaKnown RBP20.49■□□□□ 0.87
COL13A1-210ENST00000517713 USMG5Q96IX5 58 aa20.49■□□□□ 0.87
COL13A1-210ENST00000517713 METTL26Q96S19 204 aa20.49■□□□□ 0.87
COL13A1-210ENST00000517713 SERTM2A0A1B0GWG4 89 aa20.48■□□□□ 0.87
COL13A1-210ENST00000517713 FABP4P15090 132 aa20.48■□□□□ 0.87
COL13A1-210ENST00000517713 ARL3P36405 182 aa20.48■□□□□ 0.87
COL13A1-210ENST00000517713 ARL6IP6Q8N6S5 226 aa20.48■□□□□ 0.87
COL13A1-210ENST00000517713 NUP35Q8NFH5 326 aa20.48■□□□□ 0.87
COL13A1-210ENST00000517713 MT-ND6P03923 174 aa20.48■□□□□ 0.87
COL13A1-210ENST00000517713 CT83Q5H943 113 aa20.48■□□□□ 0.87
COL13A1-210ENST00000517713 TMEM136Q6ZRR5 245 aa20.48■□□□□ 0.87
COL13A1-210ENST00000517713 OR10D4PQ8NGN7 298 aa20.48■□□□□ 0.87
COL13A1-210ENST00000517713 Q96MF0 132 aa20.48■□□□□ 0.87
COL13A1-210ENST00000517713 NEU1Q99519 415 aa20.48■□□□□ 0.87
COL13A1-210ENST00000517713 ZNF785A8K8V0 405 aa20.47■□□□□ 0.87
COL13A1-210ENST00000517713 FSHBP01225 129 aa20.47■□□□□ 0.87
COL13A1-210ENST00000517713 C1orf194Q5T5A4 169 aa20.47■□□□□ 0.87
COL13A1-210ENST00000517713 Q71RC1 249 aaPredicted RBP20.47■□□□□ 0.87
COL13A1-210ENST00000517713 CR1P17927 2039 aa20.46■□□□□ 0.87
COL13A1-210ENST00000517713 A0A087X0K7 114 aa20.46■□□□□ 0.87
COL13A1-210ENST00000517713 PF4V1P10720 104 aa20.46■□□□□ 0.87
COL13A1-210ENST00000517713 GBGT1Q8N5D6 347 aa20.46■□□□□ 0.87
COL13A1-210ENST00000517713 HIST1H2BLQ99880 126 aa20.46■□□□□ 0.87
COL13A1-210ENST00000517713 KLK15Q9H2R5 256 aa20.46■□□□□ 0.87
COL13A1-210ENST00000517713 IGHV3-66A0A0C4DH42 116 aa20.46■□□□□ 0.87
COL13A1-210ENST00000517713 HIGD1CA8MV81 97 aa20.46■□□□□ 0.87
COL13A1-210ENST00000517713 A8MWL6 223 aa20.46■□□□□ 0.87
COL13A1-210ENST00000517713 APOHP02749 345 aaPredicted RBP20.46■□□□□ 0.87
COL13A1-210ENST00000517713 ZNF331Q9NQX6 463 aaPredicted RBP20.46■□□□□ 0.87
COL13A1-210ENST00000517713 ZNF207O43670 478 aaKnown RBP20.45■□□□□ 0.86
COL13A1-210ENST00000517713 IGLV1-40P01703 118 aa20.45■□□□□ 0.86
COL13A1-210ENST00000517713 RAB4BP61018 213 aa20.45■□□□□ 0.86
COL13A1-210ENST00000517713 ZC2HC1AQ96GY0 325 aa20.45■□□□□ 0.86
COL13A1-210ENST00000517713 NPIPB6E9PJ23 425 aa20.44■□□□□ 0.86
COL13A1-210ENST00000517713 RASL11AQ6T310 242 aa20.44■□□□□ 0.86
COL13A1-210ENST00000517713 PRSS57Q6UWY2 283 aa20.44■□□□□ 0.86
COL13A1-210ENST00000517713 ASCL2Q99929 193 aa20.44■□□□□ 0.86
COL13A1-210ENST00000517713 U3KQE9 123 aa20.44■□□□□ 0.86
COL13A1-210ENST00000517713 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.44■□□□□ 0.86
COL13A1-210ENST00000517713 CFHR3Q02985 330 aa20.44■□□□□ 0.86
COL13A1-210ENST00000517713 OR5R1Q8NH85 324 aa20.44■□□□□ 0.86
COL13A1-210ENST00000517713 WIPF2Q8TF74 440 aaPredicted RBP20.44■□□□□ 0.86
COL13A1-210ENST00000517713 ZNF580Q9UK33 172 aa20.44■□□□□ 0.86
COL13A1-210ENST00000517713 POLQO75417 2590 aa20.44■□□□□ 0.86
COL13A1-210ENST00000517713 IGHV3OR16-13A0A075B7E8 117 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 IGHV3-74A0A0B4J1X5 117 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 CHEK1O14757 476 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 TRBV12-3P01733 135 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 HLA-DQA1P01909 254 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 IGFL4Q6B9Z1 124 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 C9orf139Q6ZV77 190 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 OR4B1Q8NGF8 309 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 IGHG4P01861 327 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 TCF24Q7RTU0 167 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 KRTAP1-3Q8IUG1 177 aa20.43■□□□□ 0.86
COL13A1-210ENST00000517713 IGKV2-40A0A087WW87 121 aaPredicted RBP20.42■□□□□ 0.86
COL13A1-210ENST00000517713 IGHV3-49A0A0A0MS15 119 aa20.42■□□□□ 0.86
COL13A1-210ENST00000517713 IGKV2D-40P01614 121 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms