RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CHCHD1Q96BP2 118 aaKnown RBP2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 OR8B2Q96RD0 313 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 RETNLBQ9BQ08 111 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 DUSP21Q9H596 190 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 LSM2Q9Y333 95 aaKnown RBP2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 KIF25-AS1Q9Y6Z4 181 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 MINOS1-NBL1R4GNA1 71 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 KIAA1107Q9UPP5 1409 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 PLXNA3P51805 1871 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 CPAMD8Q8IZJ3 1885 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 TANC2Q9HCD6 1990 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 ARID1AO14497 2285 aa2.47□□□□□ -2.01
RNU4-60P-201ENST00000517239 DOCK9Q9BZ29 2069 aa2.46□□□□□ -2.01
RNU4-60P-201ENST00000517239 A2ML1A8K2U0 1454 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 PCM1Q15154 2024 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 TRAV3A0A0B4J244 114 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 TRBV10-2A0A0K0K1G8 114 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 A0A1B0GU33 70 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 SYNGR2O43760 224 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 IGKV3-15P01624 115 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 COL8A2P25067 703 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 SS18Q15532 418 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 Q6P435 159 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 LYPD6Q86Y78 171 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 ATOH7Q8N100 152 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 KCNRGQ8N5I3 272 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 C9orf106Q8NAJ2 232 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 CLEC2BQ92478 149 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 DPH3Q96FX2 82 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 MRPL57Q9BQC6 102 aaKnown RBP2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 DNAJC15Q9Y5T4 150 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 S4R3C0 116 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 SCN9AQ15858 1988 aa2.46□□□□□ -2.02
RNU4-60P-201ENST00000517239 USP54Q70EL1 1684 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 A0A1B0GVG6 124 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 LOC107986453A0A1B0GWG9 222 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 OR1I1O60431 355 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 RBP4P02753 201 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 CLPSP04118 112 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 CD2P06729 351 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 HIST1H1DP16402 221 aaKnown RBP2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 FXYD2P54710 66 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 S100A10P60903 97 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 BLCAPP62952 87 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 MRPS36P82909 103 aaKnown RBP2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 CIRBPQ14011 172 aaKnown RBP2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 IGFL3Q6UXB1 125 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 POP5Q969H6 163 aaKnown RBP2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 LINC00467Q9BRT7 94 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 SNRNP25Q9BV90 132 aaKnown RBP2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 SLC35B3Q9H1N7 401 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 NHP2Q9NX24 153 aaKnown RBP2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 HHLA3Q9XRX5 114 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 TPRKBQ9Y3C4 175 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 FAM215AQ9Y5M1 114 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 MPC1Q9Y5U8 109 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 HSPE1-MOB4S4R3N1 261 aa2.45□□□□□ -2.02
RNU4-60P-201ENST00000517239 MYLKQ15746 1914 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 PPIP5K1Q6PFW1 1433 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 TRBV20-1A0A075B6N2 111 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 IGHV3OR16-8A0A075B7F1 116 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 LYRM1O43325 122 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 ZNF737O75373 536 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 CD3DP04234 171 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 CTSDP07339 412 aaPredicted RBP2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 CD14P08571 375 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 SLC25A4P12235 298 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 ZNF14P17017 642 aaPredicted RBP2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 DSCR10P59022 87 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 HSD52Q0P140 79 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 ESRGQ1W209 222 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 KRTAP25-1Q3LHN0 102 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 PABPC1L2AQ5JQF8 200 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 KPRPQ5T749 579 aaPredicted RBP2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 Q6ZUT4 128 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 SFT2D1Q8WV19 159 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 METTL1Q9UBP6 276 aaKnown RBP2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 KTN1Q86UP2 1357 aaKnown RBP2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 ZNF318Q5VUA4 2279 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 PLA2R1Q13018 1463 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 CECR2Q9BXF3 1484 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 TRPM6Q9BX84 2022 aa2.44□□□□□ -2.02
RNU4-60P-201ENST00000517239 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 AKAP11Q9UKA4 1901 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 IGKV1D-42A0A075B6H8 117 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 IGLV3-12A0A075B6K2 115 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 TRAV12-2A0A075B6T6 113 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 SAA1P0DJI8 122 aaPredicted RBP2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 MGST1P10620 155 aaKnown RBP2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 MDKP21741 143 aaPredicted RBP2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 PEBP1P30086 187 aaKnown RBP2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 BTG2P78543 158 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 CATR1Q13166 79 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 NNATQ16517 81 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 MRPL54Q6P161 138 aaKnown RBP2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 GKN2Q86XP6 184 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 OR5AS1Q8N127 324 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 LINC00301Q8NCQ3 95 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 COPS9Q8WXC6 57 aa2.43□□□□□ -2.02
RNU4-60P-201ENST00000517239 TAS2R4Q9NYW5 299 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms