RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 HIGD1AQ9Y241 93 aa4.34□□□□□ -1.71
SCARNA6.1-201ENST00000516989 VWFP04275 2813 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OR4C46A6NHA9 309 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ZNF98A6NK75 572 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OR11H12B2RN74 326 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 C17orf112F2Z3M2 114 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 COX7A2P2O60397 106 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 CD7P09564 240 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RPL29P47914 159 aaKnown RBP4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 CMC4P56277 68 aaPredicted RBP4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 CD81P60033 236 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PLP1P60201 277 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OPCMLQ14982 345 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PXDC1Q5TGL8 231 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 C10orf113Q5VZT2 155 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SIGLEC15Q6ZMC9 328 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 S100A7AQ86SG5 101 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OR1L4Q8NGR5 311 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TMEM37Q8WXS4 190 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 AQP10Q96PS8 301 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 UHRF2Q96PU4 802 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SPAG8Q99932 426 aaPredicted RBP4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 GGTLC1Q9BX51 225 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SLC25A39Q9BZJ4 359 aaPredicted RBP4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 WDR61Q9GZS3 305 aaKnown RBP4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 MS4A6AQ9H2W1 248 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TUBA4BQ9H853 241 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SLC39A9Q9NUM3 307 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 UBQLN2Q9UHD9 624 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TNFSF18Q9UNG2 199 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PXMP4Q9Y6I8 212 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SMAD5-AS1Q9Y6J3 95 aa4.33□□□□□ -1.72
SCARNA6.1-201ENST00000516989 BORCS7-ASMTA0A0B4J1R7 106 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 A0A1B0GVG6 124 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 G3V3Q6 166 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 NDUFB4O95168 129 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RPL7P18124 248 aaKnown RBP4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 GALR1P47211 349 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ZNF266Q14584 549 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 C1orf194Q5T5A4 169 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 LEMD1Q68G75 181 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PATE2Q6UY27 113 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 LINC00305Q7Z4B0 112 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 DEFB125Q8N687 156 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 HSD17B11Q8NBQ5 300 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OR11H4Q8NGC9 324 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ST6GAL2Q96JF0 529 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PFDN5Q99471 154 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SHANK2-AS3Q9BTD1 123 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RSG1Q9BU20 258 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SCRT1Q9BWW7 348 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 KCNIP2Q9NS61 270 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RNF24Q9Y225 148 aa4.32□□□□□ -1.72
SCARNA6.1-201ENST00000516989 CMYA5Q8N3K9 4069 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TRAV5A0A0B4J249 113 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 A0A0D9SG52 128 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RNF222A6NCQ9 220 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 HMSDA8MTL9 139 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 H3BRN7 92 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 K7EQG2 157 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TAAR5O14804 337 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SNRPCP09234 159 aaKnown RBP4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 IGHV4-30-4P0DP06 118 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 DEFB131AP59861 70 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 GCSAMLQ5JQS6 135 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 FFAR4Q5NUL3 377 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 FAM78BQ5VT40 261 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RPL7L1Q6DKI1 246 aaKnown RBP4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 AKAP14Q86UN6 197 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 APRG1Q8IVJ8 170 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 LRRC20Q8TCA0 184 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 GATAD1Q8WUU5 269 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 LINC00052Q96N35 136 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 GPR82Q96P67 336 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ASCL2Q99929 193 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 WFDC10AQ9H1F0 79 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 NRN1Q9NPD7 142 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 RFNGQ9Y644 331 aa4.31□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TRAV2A0A0B4J234 112 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 KANTRA0A1W2PQU2 76 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PFDN1O60925 122 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 FRMD6-AS1P0C7T7 363 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ZNF688P0C7X2 276 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 CXCL2P19875 107 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ATP6V0CP27449 155 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ID1P41134 155 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SNRPD3P62318 126 aaKnown RBP4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 ACOT6Q3I5F7 207 aaPredicted RBP4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PSMG4Q5JS54 123 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PET117Q6UWS5 81 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 BPIFA4PQ86YQ2 179 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 TCTE3Q8IZS6 198 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 KCNRGQ8N5I3 272 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 FAM24BQ8N5W8 94 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 OR2G3Q8NGZ4 309 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 DCANP1Q8TF63 244 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 PARD6GQ9BYG4 376 aaPredicted RBP4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 SRD5A3Q9H8P0 318 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 MAP6D1Q9H9H5 199 aa4.3□□□□□ -1.72
SCARNA6.1-201ENST00000516989 MSRB1Q9NZV6 116 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms