RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 PEF1Q9UBV8 284 aaKnown RBP9.84□□□□□ -0.83
PVT1-203ENST00000513868 PRELID1Q9Y255 219 aa9.84□□□□□ -0.83
PVT1-203ENST00000513868 IGHV3OR16-13A0A075B7E8 117 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 IGHV3-49A0A0A0MS15 119 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 IGHV3-74A0A0B4J1X5 117 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 GGCTO75223 188 aaKnown RBP9.83□□□□□ -0.84
PVT1-203ENST00000513868 PFN1P07737 140 aaKnown RBP9.83□□□□□ -0.84
PVT1-203ENST00000513868 CXCL1P09341 107 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 OR5I1Q13606 314 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 Q6ZSV7 163 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 SFRP2Q96HF1 295 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 URGCP-MRPS24S4R325 110 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 HIVEP2P31629 2446 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 HIVEP1P15822 2718 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 A0A087X0K7 114 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 H7BYZ3 331 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 GCGP01275 180 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 IGLV2-11P01706 119 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 TMEM190Q8WZ59 177 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 SGK494Q96LW2 274 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 GPR82Q96P67 336 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 RPH3ALQ9UNE2 315 aa9.83□□□□□ -0.84
PVT1-203ENST00000513868 TGIF2-C20orf24A0A0A6YYL0 155 aa9.82□□□□□ -0.84
PVT1-203ENST00000513868 M0R3E3 92 aa9.82□□□□□ -0.84
PVT1-203ENST00000513868 ZNF253O75346 499 aa9.82□□□□□ -0.84
PVT1-203ENST00000513868 CRYBA1P05813 215 aa9.82□□□□□ -0.84
PVT1-203ENST00000513868 C16orf54Q6UWD8 224 aa9.82□□□□□ -0.84
PVT1-203ENST00000513868 GLMPQ8WWB7 406 aa9.82□□□□□ -0.84
PVT1-203ENST00000513868 NSD1Q96L73 2696 aaPredicted RBP9.82□□□□□ -0.84
PVT1-203ENST00000513868 FOLR2P14207 255 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 ATF4P18848 351 aaPredicted RBP9.81□□□□□ -0.84
PVT1-203ENST00000513868 RAB5AP20339 215 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 PSG9Q00887 426 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 BAGE2Q86Y30 109 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 GPHB5Q86YW7 130 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 KLHDC1Q8N7A1 406 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 NHLRC2Q8NBF2 726 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 CMTM2Q8TAZ6 248 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 FMC1Q96HJ9 113 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 UBE2E2Q96LR5 201 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 MLST8Q9BVC4 326 aa9.81□□□□□ -0.84
PVT1-203ENST00000513868 ZNF331Q9NQX6 463 aaPredicted RBP9.81□□□□□ -0.84
PVT1-203ENST00000513868 TRAV8-1A0A0A6YYK1 113 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 DIRC3C9JPN6 131 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 PPP1R2P9O14990 202 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 LTAP01374 205 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 S100A9P06702 114 aaKnown RBP9.8□□□□□ -0.84
PVT1-203ENST00000513868 LGALS1P09382 135 aaKnown RBP9.8□□□□□ -0.84
PVT1-203ENST00000513868 PRB4P10163 310 aaPredicted RBP9.8□□□□□ -0.84
PVT1-203ENST00000513868 GALR1P47211 349 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 UBE2G1P62253 170 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 TCTEX1D4Q5JR98 221 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 GOLT1AQ6ZVE7 132 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 OR10G8Q8NGN5 311 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 WIPF2Q8TF74 440 aaPredicted RBP9.8□□□□□ -0.84
PVT1-203ENST00000513868 PYGO2Q9BRQ0 406 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 TRBV24-1A0A075B6N3 115 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 TRBV6-1A0A0K0K1D8 114 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 ZNF320A2RRD8 509 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 ZNF785A8K8V0 405 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 RNASE1P07998 156 aaKnown RBP9.8□□□□□ -0.84
PVT1-203ENST00000513868 HLA-DMBP28068 263 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 TM4SF20Q53R12 229 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 IGFL4Q6B9Z1 124 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 Q71RC1 249 aaPredicted RBP9.8□□□□□ -0.84
PVT1-203ENST00000513868 RNASE7Q9H1E1 156 aaKnown RBP9.8□□□□□ -0.84
PVT1-203ENST00000513868 AAMDCQ9H7C9 122 aa9.8□□□□□ -0.84
PVT1-203ENST00000513868 K7EMT4 169 aa9.79□□□□□ -0.84
PVT1-203ENST00000513868 MGST1P10620 155 aaKnown RBP9.79□□□□□ -0.84
PVT1-203ENST00000513868 SRD5A1P18405 259 aa9.79□□□□□ -0.84
PVT1-203ENST00000513868 EDN2P20800 178 aa9.79□□□□□ -0.84
PVT1-203ENST00000513868 SCGB2A2Q13296 93 aa9.79□□□□□ -0.84
PVT1-203ENST00000513868 Q86TA4 180 aa9.79□□□□□ -0.84
PVT1-203ENST00000513868 ARL6IP6Q8N6S5 226 aa9.79□□□□□ -0.84
PVT1-203ENST00000513868 TMEM75Q8N9X5 138 aa9.79□□□□□ -0.84
PVT1-203ENST00000513868 SMIM12Q96EX1 92 aa9.79□□□□□ -0.84
PVT1-203ENST00000513868 OSTCQ9NRP0 149 aa9.79□□□□□ -0.84
PVT1-203ENST00000513868 V9GYV3 84 aa9.79□□□□□ -0.84
PVT1-203ENST00000513868 SETXQ7Z333 2677 aaKnown RBP9.79□□□□□ -0.84
PVT1-203ENST00000513868 FLNBO75369 2602 aaKnown RBP9.78□□□□□ -0.84
PVT1-203ENST00000513868 TRAV8-2A0A0B4J237 113 aa9.78□□□□□ -0.84
PVT1-203ENST00000513868 IGHV7-4-1A0A0J9YVY3 117 aa9.78□□□□□ -0.84
PVT1-203ENST00000513868 HILS1P60008 231 aa9.78□□□□□ -0.84
PVT1-203ENST00000513868 ERVFC1-1P60608 527 aa9.78□□□□□ -0.84
PVT1-203ENST00000513868 C18orf65Q6ZTR6 163 aa9.78□□□□□ -0.84
PVT1-203ENST00000513868 IMMP2LQ96T52 175 aa9.78□□□□□ -0.84
PVT1-203ENST00000513868 DAZ1Q9NQZ3 744 aaKnown RBP9.78□□□□□ -0.84
PVT1-203ENST00000513868 IGHV4OR15-8A0A075B7B6 117 aa9.77□□□□□ -0.84
PVT1-203ENST00000513868 A0A087WW49 117 aa9.77□□□□□ -0.84
PVT1-203ENST00000513868 CDX1P47902 265 aaPredicted RBP9.77□□□□□ -0.84
PVT1-203ENST00000513868 FOXL1Q12952 345 aa9.77□□□□□ -0.84
PVT1-203ENST00000513868 PSG3Q16557 428 aa9.77□□□□□ -0.84
PVT1-203ENST00000513868 FAM106AQ4KMX7 169 aa9.77□□□□□ -0.84
PVT1-203ENST00000513868 SMPXQ9UHP9 88 aa9.77□□□□□ -0.84
PVT1-203ENST00000513868 SETD2Q9BYW2 2564 aaPredicted RBP9.77□□□□□ -0.85
PVT1-203ENST00000513868 ZNF705FA8MVS1 300 aaPredicted RBP9.77□□□□□ -0.85
PVT1-203ENST00000513868 CHEK1O14757 476 aa9.77□□□□□ -0.85
PVT1-203ENST00000513868 FAM3BP58499 235 aaPredicted RBP9.77□□□□□ -0.85
PVT1-203ENST00000513868 FLI1Q01543 452 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms