RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 BDP1A6H8Y1 2624 aa2.34□□□□□ -2.04
PVT1-202ENST00000512617 KIF26AQ9ULI4 1882 aaPredicted RBP2.33□□□□□ -2.04
PVT1-202ENST00000512617 TRIOO75962 3097 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 A0A0D9SEW6 157 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 TRBV27A0A0K0K1C4 114 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 PNMA8CA0A1B0GUJ8 204 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 A0A1W2PP18 115 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 C7orf71A4D174 169 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 TCRAP04437 139 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 IGHV4-34P06331 123 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 CXCL8P10145 99 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 CD28P10747 220 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 PTHLHP12272 177 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 CRYBB3P26998 211 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 ARPP19P56211 112 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 HIST1H4AP62805 103 aaKnown RBP2.33□□□□□ -2.04
PVT1-202ENST00000512617 QRFPP83859 136 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 RPL18Q07020 188 aaKnown RBP2.33□□□□□ -2.04
PVT1-202ENST00000512617 DIAPH2-AS1Q14236 149 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 LGALS9BQ3B8N2 356 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 MRPL51Q4U2R6 128 aaKnown RBP2.33□□□□□ -2.04
PVT1-202ENST00000512617 FAM104BQ5XKR9 115 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 LGALS9CQ6DKI2 356 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 C22orf39Q6P5X5 142 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 PHF5AQ7RTV0 110 aaKnown RBP2.33□□□□□ -2.04
PVT1-202ENST00000512617 ZNF720Q7Z2F6 126 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 SPATA12Q7Z6I5 190 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 RPS19BP1Q86WX3 136 aaKnown RBP2.33□□□□□ -2.04
PVT1-202ENST00000512617 BPIFA4PQ86YQ2 179 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 ZNF101Q8IZC7 436 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 ZFP62Q8NB50 900 aaPredicted RBP2.33□□□□□ -2.04
PVT1-202ENST00000512617 LINC00301Q8NCQ3 95 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 LINC01006Q8NI28 216 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 NAT14Q8WUY8 206 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 FGF13Q92913 245 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 C16orf74Q96GX8 76 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 PKMYT1Q99640 499 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 GABARAPL1Q9H0R8 117 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 DUSP21Q9H596 190 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 OSTCQ9NRP0 149 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 C21orf62Q9NYP8 219 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 METTL1Q9UBP6 276 aaKnown RBP2.33□□□□□ -2.04
PVT1-202ENST00000512617 ZNF835Q9Y2P0 537 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 V9GYS6 101 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 PATJQ8NI35 1801 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 USP34Q70CQ2 3546 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 MYO15AQ9UKN7 3530 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 ANK1P16157 1881 aa2.33□□□□□ -2.04
PVT1-202ENST00000512617 DCHS1Q96JQ0 3298 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 TRIP11Q15643 1979 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 MUC6Q6W4X9 2439 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 ZFP92A6NM28 416 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 ZNF727A8MUV8 499 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 FNDC10F2Z333 226 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 CCDC179H3BU77 68 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 LEPROTO15243 131 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 CCL16O15467 120 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 HIST1H2BKO60814 126 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 HLA-DQA1P01909 254 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 HIST1H2BJP06899 126 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 OR5AC1P0C628 307 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 P0C879 139 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 CFC1BP0CG36 223 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 NPPCP23582 126 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 BRS3P32247 399 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 TGFBR1P36897 503 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 RPL27AP46776 148 aaKnown RBP2.32□□□□□ -2.04
PVT1-202ENST00000512617 TSPEAR-AS2P59090 65 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 GNB2P62879 340 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 BTG2P78543 158 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 LCE3BQ5TA77 95 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 IZUMO2Q6UXV1 221 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 PCP2Q8IVA1 136 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 CEND1Q8N111 149 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 RNF182Q8N6D2 247 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 APCDD1LQ8NCL9 501 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 OR5D16Q8NGK9 328 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 RHOXF1Q8NHV9 184 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 WFDC5Q8TCV5 224 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 ELSPBP1Q96BH3 223 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 C1orf147Q96MC9 270 aaPredicted RBP2.32□□□□□ -2.04
PVT1-202ENST00000512617 ZNF714Q96N38 554 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 GINS4Q9BRT9 223 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 SNRNP25Q9BV90 132 aaKnown RBP2.32□□□□□ -2.04
PVT1-202ENST00000512617 NPCDR1Q9BY65 106 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 KRTAP9-8Q9BYQ0 159 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 PLA2G2FQ9BZM2 168 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 XAGE1AQ9HD64 81 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 FAM60AQ9NP50 221 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 TAS2R8Q9NYW2 309 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 EPDR1Q9UM22 224 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 MPC1Q9Y5U8 109 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 IER3IP1Q9Y5U9 82 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 CITO14578 2027 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 FANCMQ8IYD8 2048 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 DOCK6Q96HP0 2047 aa2.32□□□□□ -2.04
PVT1-202ENST00000512617 MYH10P35580 1976 aa2.31□□□□□ -2.04
PVT1-202ENST00000512617 SCN1AP35498 2009 aa2.31□□□□□ -2.04
PVT1-202ENST00000512617 MYO10Q9HD67 2058 aa2.31□□□□□ -2.04
PVT1-202ENST00000512617 TRGV10A0A0A0MS01 117 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms