RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 LIME1Q9H400 295 aa11.89□□□□□ -0.51
TRIO-218ENST00000512070 CITED1Q99966 193 aa11.89□□□□□ -0.51
TRIO-218ENST00000512070 CRYGSP22914 178 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 PMVKQ15126 192 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 C9orf153Q5TBE3 101 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 VMO1Q7Z5L0 202 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 LCN12Q6JVE5 192 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 GAGE2AQ6NT46 116 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 DAZ1Q9NQZ3 744 aaKnown RBP11.88□□□□□ -0.51
TRIO-218ENST00000512070 TRGV1A0A0A0MS02 117 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 INS-IGF2F8WCM5 200 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 PRTN3P24158 256 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 PSCAO43653 123 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 OR11H6Q8NGC7 330 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 CXCL1P09341 107 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 SNHG12Q9BXW3 62 aa11.88□□□□□ -0.51
TRIO-218ENST00000512070 SRSF3P84103 164 aaKnown RBP11.88□□□□□ -0.51
TRIO-218ENST00000512070 RPP25LQ8N5L8 163 aaKnown RBP11.88□□□□□ -0.51
TRIO-218ENST00000512070 K7EMI3 77 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 LINC01545Q5VT33 79 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 PAQR4Q8N4S7 273 aaPredicted RBP11.87□□□□□ -0.51
TRIO-218ENST00000512070 CEACAM8P31997 349 aaPredicted RBP11.87□□□□□ -0.51
TRIO-218ENST00000512070 C20orf144Q9BQM9 153 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 IGHV1-3A0A0C4DH29 117 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 CELA3AP09093 270 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 EFNA4P52798 201 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 SH2D1AO60880 128 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 CSRP1P21291 193 aaKnown RBP11.87□□□□□ -0.51
TRIO-218ENST00000512070 ZNF319Q9P2F9 582 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 B4DSR2 109 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 GTSF1LQ9H1H1 148 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 LSM4Q9Y4Z0 139 aaKnown RBP11.87□□□□□ -0.51
TRIO-218ENST00000512070 ARHGAP32A7KAX9 2087 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 EXOC3-AS1Q8N2X6 119 aa11.87□□□□□ -0.51
TRIO-218ENST00000512070 IGKV2-40A0A087WW87 121 aaPredicted RBP11.86□□□□□ -0.51
TRIO-218ENST00000512070 IGKV2D-40P01614 121 aaPredicted RBP11.86□□□□□ -0.51
TRIO-218ENST00000512070 TMEM158Q8WZ71 300 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 CITED2Q99967 270 aaPredicted RBP11.86□□□□□ -0.51
TRIO-218ENST00000512070 LURAP1LQ8IV03 231 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 LYZL4Q96KX0 146 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 MMP23AO75900 390 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 ZC2HC1BQ5TFG8 222 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 ZNF492Q9P255 531 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 A0A087X0K7 114 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 IGHV3-64A0A075B6Q5 118 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 IGHV3OR16-8A0A075B7F1 116 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 IGHV1-18A0A0C4DH31 117 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 IGHV1-24A0A0C4DH33 117 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.86□□□□□ -0.51
TRIO-218ENST00000512070 KIF26AQ9ULI4 1882 aaPredicted RBP11.86□□□□□ -0.51
TRIO-218ENST00000512070 WFDC1Q9HC57 220 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 PLSCR4Q9NRQ2 329 aa11.86□□□□□ -0.51
TRIO-218ENST00000512070 CSPG4Q6UVK1 2322 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 H0YJW9 148 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 TMEM178BH3BS89 294 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 A0A1W2PRX2 142 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 IGHV1-46P01743 117 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 ADAMTSL5Q6ZMM2 481 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 H3BQ85 93 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 MPV17L2Q567V2 206 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 TRAV8-3A0A0A6YYJ7 113 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 TRAV40A0A0B4J280 105 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 C3orf79P0CE67 100 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 C9JAW5 83 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 GLRX5Q86SX6 157 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 SCRT1Q9BWW7 348 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 CFPP27918 469 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 DSCR8Q96T75 97 aa11.85□□□□□ -0.51
TRIO-218ENST00000512070 RSPO3Q9BXY4 272 aaPredicted RBP11.85□□□□□ -0.51
TRIO-218ENST00000512070 OTOGLQ3ZCN5 2332 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 SAP30O75446 220 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 FAM201AQ5SY85 155 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 ACACBO00763 2458 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 A0A0A6YYD4 124 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 TRAV13-2A0A0B4J235 113 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 TMEM258P61165 79 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 SUMO4Q6EEV6 95 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 C1orf159Q96HA4 380 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 CTSBP07858 339 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 BUB1B-PAK6H3BSN5 160 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 RPL15P61313 204 aaKnown RBP11.84□□□□□ -0.51
TRIO-218ENST00000512070 TMEM200BQ69YZ2 307 aa11.84□□□□□ -0.51
TRIO-218ENST00000512070 IFITM1P13164 125 aa11.83□□□□□ -0.51
TRIO-218ENST00000512070 DSCAML1Q8TD84 2053 aa11.83□□□□□ -0.52
TRIO-218ENST00000512070 SIGLEC9Q9Y336 463 aa11.83□□□□□ -0.52
TRIO-218ENST00000512070 ATP1A1-AS1Q5TC04 95 aa11.83□□□□□ -0.52
TRIO-218ENST00000512070 RMI2Q96E14 147 aa11.83□□□□□ -0.52
TRIO-218ENST00000512070 I3L3M4 83 aa11.83□□□□□ -0.52
TRIO-218ENST00000512070 C3orf36Q3SXR2 165 aa11.83□□□□□ -0.52
TRIO-218ENST00000512070 ZNF837Q96EG3 531 aaPredicted RBP11.83□□□□□ -0.52
TRIO-218ENST00000512070 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
TRIO-218ENST00000512070 TAL2Q16559 108 aa11.83□□□□□ -0.52
TRIO-218ENST00000512070 PRSS46E5RG02 174 aa11.83□□□□□ -0.52
TRIO-218ENST00000512070 CRIM1Q9NZV1 1036 aa11.83□□□□□ -0.52
TRIO-218ENST00000512070 GAGE1Q13065 139 aa11.82□□□□□ -0.52
TRIO-218ENST00000512070 PPIFP30405 207 aaKnown RBP11.82□□□□□ -0.52
TRIO-218ENST00000512070 Q86TA4 180 aa11.82□□□□□ -0.52
TRIO-218ENST00000512070 A8MWP6 167 aa11.82□□□□□ -0.52
TRIO-218ENST00000512070 NCR2O95944 276 aa11.82□□□□□ -0.52
TRIO-218ENST00000512070 CYTL1Q9NRR1 136 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms