RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 Q6ZRG5 221 aa9.66□□□□□ -0.86
CCHCR1-227ENST00000508852 LINC00854A0A1B0GVQ3 168 aa9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 M0R2Z0 102 aa9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 CRXO43186 299 aaPredicted RBP9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 COX7A2P2O60397 106 aa9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 PVALBP20472 110 aaPredicted RBP9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 CDKN1BP46527 198 aa9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 HIST1H1AQ02539 215 aaPredicted RBP9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 GUK1Q16774 197 aa9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 LINC00305Q7Z4B0 112 aa9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 RNF182Q8N6D2 247 aa9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 C16orf74Q96GX8 76 aa9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 LINC01587Q99440 93 aa9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 PXMP4Q9Y6I8 212 aa9.65□□□□□ -0.86
CCHCR1-227ENST00000508852 C7orf66A4D0T2 115 aa9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 PRSS29PA6NIE9 313 aa9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 AGPAT2O15120 278 aa9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 BTCP35070 178 aa9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 SLC38A11Q08AI6 406 aa9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 TMEM88Q6PEY1 159 aa9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 C12orf45Q8N5I9 185 aaPredicted RBP9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 OR1L4Q8NGR5 311 aa9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 OR10J6PQ8NGY7 276 aa9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 RPUSD4Q96CM3 377 aaKnown RBP9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 UHRF2Q96PU4 802 aa9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 PFDN5Q99471 154 aa9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 C20orf85Q9H1P6 137 aa9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 RCL1Q9Y2P8 373 aaKnown RBP9.64□□□□□ -0.87
CCHCR1-227ENST00000508852 CBY3A6NI87 242 aa9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 ZNF705GA8MUZ8 300 aaPredicted RBP9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 H7BYZ3 331 aa9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 LYRM1O43325 122 aa9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 MBPP02686 304 aaPredicted RBP9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 ATP5G1P05496 136 aa9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 ATP5G3P48201 142 aa9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 C10orf113Q5VZT2 155 aa9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 IGFL4Q6B9Z1 124 aa9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 PATE2Q6UY27 113 aa9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 SDHCQ99643 169 aaPredicted RBP9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 ATG101Q9BSB4 218 aa9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 DNAJC4Q9NNZ3 241 aa9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 ZNF331Q9NQX6 463 aaPredicted RBP9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 TIMM8BQ9Y5J9 83 aaPredicted RBP9.63□□□□□ -0.87
CCHCR1-227ENST00000508852 CCNKO75909 580 aa9.62□□□□□ -0.87
CCHCR1-227ENST00000508852 S100A11P31949 105 aa9.62□□□□□ -0.87
CCHCR1-227ENST00000508852 CAMLGP49069 296 aa9.62□□□□□ -0.87
CCHCR1-227ENST00000508852 BCAP31P51572 246 aa9.62□□□□□ -0.87
CCHCR1-227ENST00000508852 HBG1P69891 147 aa9.62□□□□□ -0.87
CCHCR1-227ENST00000508852 HBG2P69892 147 aa9.62□□□□□ -0.87
CCHCR1-227ENST00000508852 CCDC28AQ8IWP9 274 aa9.62□□□□□ -0.87
CCHCR1-227ENST00000508852 BAP18Q8IXM2 172 aa9.62□□□□□ -0.87
CCHCR1-227ENST00000508852 ZNF431Q8TF32 576 aaPredicted RBP9.62□□□□□ -0.87
CCHCR1-227ENST00000508852 CCDC32Q9BV29 185 aa9.62□□□□□ -0.87
CCHCR1-227ENST00000508852 C5orf51A6NDU8 294 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 FAM25EA8MYX2 175 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 M0R2N4 97 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 MRPS12O15235 138 aaKnown RBP9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 TCRBP04435 133 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 DEFB130BP0DP73 79 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 DEFB130AP0DP74 79 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 CAV2P51636 162 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 Q6ZR54 194 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 LINC00299Q6ZSB3 139 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 STX12Q86Y82 276 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 TMEM263Q8WUH6 116 aaKnown RBP9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 C2orf50Q96LR7 162 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 UQCC1Q9NVA1 299 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 PLA2G2EQ9NZK7 142 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 DNAH2Q9P225 4427 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 DNAH17Q9UFH2 4485 aa9.61□□□□□ -0.87
CCHCR1-227ENST00000508852 FAT2Q9NYQ8 4349 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 TRAV12-2A0A075B6T6 113 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 A0A1B0GVY2 172 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 F5H768 121 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 RTL8CO15255 209 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 ZNF253O75346 499 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 MED14OSP0DP75 135 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 CCL18P55774 89 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 ATP6V1FQ16864 119 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 C1orf134Q5TEV5 83 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 ODF3Q96PU9 254 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 MGST2Q99735 147 aa9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 LSM5Q9Y4Y9 91 aaKnown RBP9.6□□□□□ -0.87
CCHCR1-227ENST00000508852 PLA2G10O15496 165 aa9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 MPDU1O75352 247 aa9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 LEPP41159 167 aa9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 RPL29P47914 159 aaKnown RBP9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 SULT1A1P50225 295 aa9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 ARL16Q0P5N6 197 aa9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 MZT2BQ6NZ67 158 aa9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 NRARPQ7Z6K4 114 aa9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 CHAC2Q8WUX2 184 aa9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 TMEM37Q8WXS4 190 aa9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 MRPL53Q96EL3 112 aaKnown RBP9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 LYRM2Q9NU23 88 aaPredicted RBP9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 WDR83OSQ9Y284 106 aa9.59□□□□□ -0.87
CCHCR1-227ENST00000508852 IGLV2-18A0A075B6J9 118 aa9.58□□□□□ -0.88
CCHCR1-227ENST00000508852 PLAC8L1A1L4L8 177 aa9.58□□□□□ -0.88
CCHCR1-227ENST00000508852 H2AFB2P0C5Z0 115 aa9.58□□□□□ -0.88
CCHCR1-227ENST00000508852 IGLC2P0DOY2 106 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms