RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 LYPD1Q8N2G4 141 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 ZBTB8BQ8NAP8 495 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-211ENST00000508546 OR52E5Q8NH55 327 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 RNASE11Q8TAA1 199 aaKnown RBP6.54□□□□□ -1.36
NEDD9-211ENST00000508546 NPIPB3Q92617 1050 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 RRNAD1Q96FB5 475 aaKnown RBP6.54□□□□□ -1.36
NEDD9-211ENST00000508546 TMEM208Q9BTX3 173 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 KRTAP1-5Q9BYS1 174 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 Q9H3A6 140 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 GSKIPQ9P0R6 139 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 MBD2Q9UBB5 411 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 BOLA1Q9Y3E2 137 aa6.54□□□□□ -1.36
NEDD9-211ENST00000508546 A0A0G2JRQ6 117 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 A0A1W2PPQ1 181 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 F6UB75 175 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 L7N2F9 121 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 SCGB1D2O95969 90 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 ATP5G1P05496 136 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 DEFB130BP0DP73 79 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 DEFB130AP0DP74 79 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 ATP5G3P48201 142 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 B2MP61769 119 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 IL15RAQ13261 267 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 RAB32Q13637 225 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 CLINT1Q14677 625 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 SMCO1Q147U7 214 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 C1orf194Q5T5A4 169 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 SAMD13Q5VXD3 122 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 AMTNQ6UX39 209 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 ZNF546Q86UE3 836 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 SLC24A4Q8NFF2 622 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 OR51G1Q8NGK1 321 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 RNF141Q8WVD5 230 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 RNF125Q96EQ8 232 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 HEYLQ9NQ87 328 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-211ENST00000508546 RPRMQ9NS64 109 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
NEDD9-211ENST00000508546 PLAC8L1A1L4L8 177 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 CBY3A6NI87 242 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 ZNF705GA8MUZ8 300 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-211ENST00000508546 SLC25A6P12236 298 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 CXCL2P19875 107 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 XGP55808 180 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 ZNF345Q14585 488 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 LGALSLQ3ZCW2 172 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-211ENST00000508546 FAM219AQ8IW50 185 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 OR4D5Q8NGN0 318 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 TMEM170AQ8WVE7 144 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 GPR146Q96CH1 333 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 ACY3Q96HD9 319 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 UPK3BQ9BT76 320 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.52□□□□□ -1.37
NEDD9-211ENST00000508546 OR5AC2Q9NZP5 309 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 DOK5Q9P104 306 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 TNFSF18Q9UNG2 199 aa6.52□□□□□ -1.37
NEDD9-211ENST00000508546 LSM5Q9Y4Y9 91 aaKnown RBP6.52□□□□□ -1.37
NEDD9-211ENST00000508546 RNF222A6NCQ9 220 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 H0YIZ8 118 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 K7EPK0 472 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 CRXO43186 299 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-211ENST00000508546 TSC22D2O75157 780 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 MBPP02686 304 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-211ENST00000508546 RLN2P04090 185 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 PRM2P04554 102 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 S100A11P31949 105 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 MEOX2P50222 304 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 OR2F1Q13607 317 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 TMUB2Q71RG4 321 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 INO80EQ8NBZ0 244 aaPredicted RBP6.51□□□□□ -1.37
NEDD9-211ENST00000508546 OR1S1Q8NH92 325 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 FRZBQ92765 325 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 ZNF503Q96F45 646 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 PBDC1Q9BVG4 233 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 ARL6Q9H0F7 186 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 PGPEP1Q9NXJ5 209 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 CACNG5Q9UF02 275 aa6.51□□□□□ -1.37
NEDD9-211ENST00000508546 A0A0D9SG52 128 aa6.5□□□□□ -1.37
NEDD9-211ENST00000508546 RGS13O14921 159 aa6.5□□□□□ -1.37
NEDD9-211ENST00000508546 INSP01308 110 aa6.5□□□□□ -1.37
NEDD9-211ENST00000508546 IFITM2Q01629 132 aa6.5□□□□□ -1.37
NEDD9-211ENST00000508546 OPCMLQ14982 345 aa6.5□□□□□ -1.37
NEDD9-211ENST00000508546 CDPF1Q6NVV7 123 aa6.5□□□□□ -1.37
NEDD9-211ENST00000508546 Q6ZRN7 208 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-211ENST00000508546 ACOT7LQ6ZUV0 252 aa6.5□□□□□ -1.37
NEDD9-211ENST00000508546 KCNRGQ8N5I3 272 aa6.5□□□□□ -1.37
NEDD9-211ENST00000508546 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
NEDD9-211ENST00000508546 AQP10Q96PS8 301 aa6.5□□□□□ -1.37
NEDD9-211ENST00000508546 CACFD1Q9UGQ2 172 aa6.5□□□□□ -1.37
NEDD9-211ENST00000508546 RCL1Q9Y2P8 373 aaKnown RBP6.5□□□□□ -1.37
NEDD9-211ENST00000508546 KANTRA0A1W2PQU2 76 aa6.49□□□□□ -1.37
NEDD9-211ENST00000508546 CEBPZOSA8MTT3 80 aa6.49□□□□□ -1.37
NEDD9-211ENST00000508546 E5RGE8 158 aa6.49□□□□□ -1.37
NEDD9-211ENST00000508546 M0R2Z0 102 aa6.49□□□□□ -1.37
NEDD9-211ENST00000508546 WRBO00258 174 aa6.49□□□□□ -1.37
NEDD9-211ENST00000508546 BCL2L11O43521 198 aa6.49□□□□□ -1.37
NEDD9-211ENST00000508546 SSSCA1O60232 199 aa6.49□□□□□ -1.37
NEDD9-211ENST00000508546 PITX3O75364 302 aa6.49□□□□□ -1.37
NEDD9-211ENST00000508546 DUSP14O95147 198 aaKnown RBP6.49□□□□□ -1.37
NEDD9-211ENST00000508546 AZU1P20160 251 aa6.49□□□□□ -1.37
NEDD9-211ENST00000508546 PVALBP20472 110 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms