RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 RPL7P18124 248 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 HLA-DMBP28068 263 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 SYNJ2BPP57105 145 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 RANP62826 216 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 SUMO1P63165 101 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 FHL3Q13643 280 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 C1orf194Q5T5A4 169 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 C8orf86Q6ZUL3 223 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 OR8I2Q8N0Y5 310 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 KLHL30-AS1Q8NEE0 82 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 RPUSD4Q96CM3 377 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 RAX2Q96IS3 184 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 TXNDC17Q9BRA2 123 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 Q9H3A6 140 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 DAZ1Q9NQZ3 744 aaKnown RBP5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 RNF114Q9Y508 228 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 SELENOKQ9Y6D0 94 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 TRAV8-2A0A0B4J237 113 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 ZNF320A2RRD8 509 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 PGPA6NDG6 321 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 PGPEP1LA6NFU8 196 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 K7EMT4 169 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 M0R3E3 92 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 LGALS9O00182 355 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 PEX7O00628 323 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 SOCS3O14543 225 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 CHEK1O14757 476 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 KLF5Q13887 457 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 PDE6HQ13956 83 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 ZNF674Q2M3X9 581 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 RPEL1Q2QD12 228 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 AWAT1Q58HT5 328 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 KHDC1LQ5JSQ8 128 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 IGFL4Q6B9Z1 124 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 C1QL4Q86Z23 238 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 CLRN3Q8NCR9 226 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 OR4F17Q8NGA8 305 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 IGF2BP2-AS1Q96M15 143 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 LINC00479Q96M42 142 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 SDF2L1Q9HCN8 221 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 ZNF331Q9NQX6 463 aaPredicted RBP5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 OTORQ9NRC9 128 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 SMPXQ9UHP9 88 aa5.23□□□□□ -1.57
TOPBP1-203ENST00000503464 A0A1W2PRX2 142 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 C2orf70A6NJV1 201 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 ZNF727A8MUV8 499 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 LINC01619G3V211 115 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 J3QL48 77 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 ZNF253O75346 499 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 IGLV2-11P01706 119 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 IGLV2-8P01709 118 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 TCRAP04437 139 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 AKR1C3P42330 323 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 RPL35P42766 123 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 RPL23P62829 140 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 FAM106AQ4KMX7 169 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 FAM74A3Q4VXF1 159 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 S100A7AQ86SG5 101 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 SVBPQ8N300 66 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 C5orf17Q8NAS9 161 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 OR11H1Q8NG94 326 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 OR1N2Q8NGR9 330 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 WFDC12Q8WWY7 111 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 DLX4Q92988 240 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 GPR82Q96P67 336 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 SMIM7Q9BQ49 75 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 RHPN1-AS1Q9BWJ2 59 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 EPDR1Q9UM22 224 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 UFC1Q9Y3C8 167 aa5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 TSSC4Q9Y5U2 329 aaPredicted RBP5.22□□□□□ -1.57
TOPBP1-203ENST00000503464 TRAV8-1A0A0A6YYK1 113 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 TRAV34A0A0B4J273 112 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 C7orf77A4D0Y5 90 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 C9JCJ5 164 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 PRAC2D3DTV9 90 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 K7EN84 100 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 DNASE2O00115 360 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 ISLRO14498 428 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 SLC25A5P05141 298 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 ATF4P18848 351 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 CBLN1P23435 193 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 GALR1P47211 349 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 CENPWQ5EE01 88 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 LINC01551Q86U37 167 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 LYPD1Q8N2G4 141 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 RNF182Q8N6D2 247 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 TVP23CQ96ET8 276 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 C20orf173Q96LM9 149 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 TCEAL7Q9BRU2 100 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 NIPSNAP3BQ9BS92 247 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 ATG101Q9BSB4 218 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 NKX6-2Q9C056 277 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 AURKAIP1Q9NWT8 199 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 MLXQ9UH92 298 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 NAT8Q9UHE5 227 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 RPH3ALQ9UNE2 315 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 KLF12Q9Y4X4 402 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 TENM1Q9UKZ4 2725 aa5.21□□□□□ -1.58
TOPBP1-203ENST00000503464 WNK1Q9H4A3 2382 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms