RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 PAXXQ9BUH6 204 aa10.05□□□□□ -0.8
PTPN7-218ENST00000496197 ACTR3CQ9C0K3 210 aaPredicted RBP10.05□□□□□ -0.8
PTPN7-218ENST00000496197 OR51M1Q9H341 326 aa10.05□□□□□ -0.8
PTPN7-218ENST00000496197 AURKAIP1Q9NWT8 199 aaPredicted RBP10.05□□□□□ -0.8
PTPN7-218ENST00000496197 CTXND1A0A1B0GTU2 59 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 DNASE2O00115 360 aaPredicted RBP10.04□□□□□ -0.8
PTPN7-218ENST00000496197 NDUFB4O95168 129 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 ZNF688P0C7X2 276 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 SULT1A2P50226 295 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 DEFB1P60022 68 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 CD81P60033 236 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 KHDC3LQ587J8 217 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 RNF182Q8N6D2 247 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 HRH4Q9H3N8 390 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 TMPRSS5Q9H3S3 457 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 MAP6D1Q9H9H5 199 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 NOTCH1P46531 2555 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 NBEAL1Q6ZS30 2694 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 TRBV19A0A075B6N1 114 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 TRAV2A0A0B4J234 112 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 OR4C46A6NHA9 309 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 UMAD1C9J7I0 102 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 PAFAH1B2P68402 229 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 LCN15Q6UWW0 184 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 BLNKQ8WV28 456 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 RNF141Q8WVD5 230 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 PHYHIPLQ96FC7 376 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 CITED4Q96RK1 184 aa10.04□□□□□ -0.8
PTPN7-218ENST00000496197 AGRNO00468 2067 aa10.03□□□□□ -0.8
PTPN7-218ENST00000496197 HIST1H1EP10412 219 aaKnown RBP10.03□□□□□ -0.8
PTPN7-218ENST00000496197 TAS2R45P59539 299 aa10.03□□□□□ -0.8
PTPN7-218ENST00000496197 UBE2L3P68036 154 aaKnown RBP10.03□□□□□ -0.8
PTPN7-218ENST00000496197 APRG1Q8IVJ8 170 aa10.03□□□□□ -0.8
PTPN7-218ENST00000496197 ZNF331Q9NQX6 463 aaPredicted RBP10.03□□□□□ -0.8
PTPN7-218ENST00000496197 RNF24Q9Y225 148 aa10.03□□□□□ -0.8
PTPN7-218ENST00000496197 A0A1B0GV50 99 aa10.02□□□□□ -0.81
PTPN7-218ENST00000496197 MAP1LC3B2A6NCE7 125 aa10.02□□□□□ -0.81
PTPN7-218ENST00000496197 NBEAP1P0C6P0 100 aa10.02□□□□□ -0.81
PTPN7-218ENST00000496197 GCHFRP30047 84 aa10.02□□□□□ -0.81
PTPN7-218ENST00000496197 DEFB131AP59861 70 aa10.02□□□□□ -0.81
PTPN7-218ENST00000496197 PSMG4Q5JS54 123 aa10.02□□□□□ -0.81
PTPN7-218ENST00000496197 EIF5AL1Q6IS14 154 aaKnown RBP10.02□□□□□ -0.81
PTPN7-218ENST00000496197 PQLC2Q6ZP29 291 aa10.02□□□□□ -0.81
PTPN7-218ENST00000496197 DEFB125Q8N687 156 aa10.02□□□□□ -0.81
PTPN7-218ENST00000496197 C16orf92Q96LL3 132 aa10.02□□□□□ -0.81
PTPN7-218ENST00000496197 MAP1LC3BQ9GZQ8 125 aa10.02□□□□□ -0.81
PTPN7-218ENST00000496197 K7EIL1 84 aa10.01□□□□□ -0.81
PTPN7-218ENST00000496197 MEOX2P50222 304 aa10.01□□□□□ -0.81
PTPN7-218ENST00000496197 TEX261Q6UWH6 196 aa10.01□□□□□ -0.81
PTPN7-218ENST00000496197 DPPA3Q6W0C5 159 aa10.01□□□□□ -0.81
PTPN7-218ENST00000496197 EXOC3-AS1Q8N2X6 119 aa10.01□□□□□ -0.81
PTPN7-218ENST00000496197 SUN5Q8TC36 379 aa10.01□□□□□ -0.81
PTPN7-218ENST00000496197 MBD3L1Q8WWY6 194 aa10.01□□□□□ -0.81
PTPN7-218ENST00000496197 F6UB75 175 aa10□□□□□ -0.81
PTPN7-218ENST00000496197 ISLRO14498 428 aa10□□□□□ -0.81
PTPN7-218ENST00000496197 CXorf1O96002 111 aa10□□□□□ -0.81
PTPN7-218ENST00000496197 PSMB3P49720 205 aa10□□□□□ -0.81
PTPN7-218ENST00000496197 CCL20P78556 96 aa10□□□□□ -0.81
PTPN7-218ENST00000496197 GDF5OSQ5U4N7 250 aa10□□□□□ -0.81
PTPN7-218ENST00000496197 GTSCR1Q86UQ5 136 aa10□□□□□ -0.81
PTPN7-218ENST00000496197 SFT2D1Q8WV19 159 aa10□□□□□ -0.81
PTPN7-218ENST00000496197 LINC00052Q96N35 136 aa10□□□□□ -0.81
PTPN7-218ENST00000496197 ZNF705FA8MVS1 300 aaPredicted RBP9.99□□□□□ -0.81
PTPN7-218ENST00000496197 OR11H12B2RN74 326 aa9.99□□□□□ -0.81
PTPN7-218ENST00000496197 M0R3E3 92 aa9.99□□□□□ -0.81
PTPN7-218ENST00000496197 H2AFB1P0C5Y9 115 aa9.99□□□□□ -0.81
PTPN7-218ENST00000496197 RAB5CP51148 216 aa9.99□□□□□ -0.81
PTPN7-218ENST00000496197 IFITM2Q01629 132 aa9.99□□□□□ -0.81
PTPN7-218ENST00000496197 GUK1Q16774 197 aa9.99□□□□□ -0.81
PTPN7-218ENST00000496197 IQCF2Q8IXL9 164 aa9.99□□□□□ -0.81
PTPN7-218ENST00000496197 ZNF680Q8NEM1 530 aa9.99□□□□□ -0.81
PTPN7-218ENST00000496197 PCNPQ8WW12 178 aaKnown RBP9.99□□□□□ -0.81
PTPN7-218ENST00000496197 SLC50A1Q9BRV3 221 aa9.99□□□□□ -0.81
PTPN7-218ENST00000496197 KNCNA6PVL3 124 aa9.98□□□□□ -0.81
PTPN7-218ENST00000496197 ZNF705EA8MWA4 302 aaPredicted RBP9.98□□□□□ -0.81
PTPN7-218ENST00000496197 PRAC2D3DTV9 90 aa9.98□□□□□ -0.81
PTPN7-218ENST00000496197 ZNF253O75346 499 aa9.98□□□□□ -0.81
PTPN7-218ENST00000496197 RANP62826 216 aaKnown RBP9.98□□□□□ -0.81
PTPN7-218ENST00000496197 PDE6HQ13956 83 aa9.98□□□□□ -0.81
PTPN7-218ENST00000496197 LRRC20Q8TCA0 184 aa9.98□□□□□ -0.81
PTPN7-218ENST00000496197 FAM110AQ9BQ89 295 aa9.98□□□□□ -0.81
PTPN7-218ENST00000496197 Q9H3A6 140 aa9.98□□□□□ -0.81
PTPN7-218ENST00000496197 ZNF705DP0CH99 300 aaPredicted RBP9.98□□□□□ -0.81
PTPN7-218ENST00000496197 ZNF705BP0CI00 300 aaPredicted RBP9.98□□□□□ -0.81
PTPN7-218ENST00000496197 IGHV4-30-4P0DP06 118 aa9.98□□□□□ -0.81
PTPN7-218ENST00000496197 SNRPD3P62318 126 aaKnown RBP9.98□□□□□ -0.81
PTPN7-218ENST00000496197 ICAM4Q14773 271 aa9.98□□□□□ -0.81
PTPN7-218ENST00000496197 PSG3Q16557 428 aa9.98□□□□□ -0.81
PTPN7-218ENST00000496197 ZMAT5Q9UDW3 170 aaKnown RBP9.98□□□□□ -0.81
PTPN7-218ENST00000496197 YTHDF2Q9Y5A9 579 aaKnown RBP9.98□□□□□ -0.81
PTPN7-218ENST00000496197 GGTLC3B5MD39 225 aa9.97□□□□□ -0.81
PTPN7-218ENST00000496197 ID1P41134 155 aa9.97□□□□□ -0.81
PTPN7-218ENST00000496197 UBE2G2P60604 165 aa9.97□□□□□ -0.81
PTPN7-218ENST00000496197 DEFA6Q01524 100 aa9.97□□□□□ -0.81
PTPN7-218ENST00000496197 SRD5A3Q9H8P0 318 aa9.97□□□□□ -0.81
PTPN7-218ENST00000496197 TRAV1-1A0A0B4J248 108 aa9.96□□□□□ -0.82
PTPN7-218ENST00000496197 RBMY1BA6NDE4 496 aaKnown RBP9.96□□□□□ -0.82
PTPN7-218ENST00000496197 RBMY1EA6NEQ0 496 aaKnown RBP9.96□□□□□ -0.82
PTPN7-218ENST00000496197 RBMY1DP0C7P1 496 aaKnown RBP9.96□□□□□ -0.82
PTPN7-218ENST00000496197 PSG9Q00887 426 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms