RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 PRB4P10163 310 aaPredicted RBP14.58□□□□□ -0.08
USP39-218ENST00000493829 GUCA2BQ16661 112 aa14.58□□□□□ -0.08
USP39-218ENST00000493829 WFDC9Q8NEX5 89 aa14.58□□□□□ -0.08
USP39-218ENST00000493829 NRN1Q9NPD7 142 aa14.58□□□□□ -0.08
USP39-218ENST00000493829 GNG13Q9P2W3 67 aa14.58□□□□□ -0.08
USP39-218ENST00000493829 DNASE2O00115 360 aaPredicted RBP14.57□□□□□ -0.08
USP39-218ENST00000493829 MCRIP2Q9BUT9 160 aaKnown RBP14.57□□□□□ -0.08
USP39-218ENST00000493829 TMEM167BQ9NRX6 74 aa14.57□□□□□ -0.08
USP39-218ENST00000493829 TRBV19A0A075B6N1 114 aa14.56□□□□□ -0.08
USP39-218ENST00000493829 A0A087X0K7 114 aa14.56□□□□□ -0.08
USP39-218ENST00000493829 TRAV1-1A0A0B4J248 108 aa14.56□□□□□ -0.08
USP39-218ENST00000493829 PRR31Q5SQ13 230 aa14.56□□□□□ -0.08
USP39-218ENST00000493829 RANP62826 216 aaKnown RBP14.55□□□□□ -0.08
USP39-218ENST00000493829 RNF182Q8N6D2 247 aa14.55□□□□□ -0.08
USP39-218ENST00000493829 YTHDF2Q9Y5A9 579 aaKnown RBP14.55□□□□□ -0.08
USP39-218ENST00000493829 NDUFB4O95168 129 aa14.55□□□□□ -0.08
USP39-218ENST00000493829 HLA-DMBP28068 263 aa14.55□□□□□ -0.08
USP39-218ENST00000493829 HAGHQ16775 308 aa14.55□□□□□ -0.08
USP39-218ENST00000493829 OXLD1Q5BKU9 147 aa14.55□□□□□ -0.08
USP39-218ENST00000493829 CLLU1Q5K131 121 aa14.55□□□□□ -0.08
USP39-218ENST00000493829 EXOC3-AS1Q8N2X6 119 aa14.55□□□□□ -0.08
USP39-218ENST00000493829 FAM24BQ8N5W8 94 aa14.55□□□□□ -0.08
USP39-218ENST00000493829 C16orf92Q96LL3 132 aa14.55□□□□□ -0.08
USP39-218ENST00000493829 TSPAN4O14817 238 aa14.54□□□□□ -0.08
USP39-218ENST00000493829 CD5P06127 495 aa14.54□□□□□ -0.08
USP39-218ENST00000493829 PSMB3P49720 205 aa14.54□□□□□ -0.08
USP39-218ENST00000493829 GUK1Q16774 197 aa14.54□□□□□ -0.08
USP39-218ENST00000493829 LCN12Q6JVE5 192 aa14.54□□□□□ -0.08
USP39-218ENST00000493829 DCANP1Q8TF63 244 aa14.54□□□□□ -0.08
USP39-218ENST00000493829 PAGE4O60829 102 aa14.53□□□□□ -0.08
USP39-218ENST00000493829 INSL3P51460 131 aa14.53□□□□□ -0.08
USP39-218ENST00000493829 PAFAH1B2P68402 229 aa14.53□□□□□ -0.08
USP39-218ENST00000493829 LYPD6BQ8NI32 183 aa14.53□□□□□ -0.08
USP39-218ENST00000493829 Q9H3A6 140 aa14.53□□□□□ -0.08
USP39-218ENST00000493829 TRAV8-2A0A0B4J237 113 aa14.52□□□□□ -0.08
USP39-218ENST00000493829 SOCS3O14543 225 aa14.52□□□□□ -0.08
USP39-218ENST00000493829 ZNF688P0C7X2 276 aa14.52□□□□□ -0.08
USP39-218ENST00000493829 MEOX2P50222 304 aa14.52□□□□□ -0.08
USP39-218ENST00000493829 CST9LP1Q5W188 147 aa14.52□□□□□ -0.08
USP39-218ENST00000493829 SUN5Q8TC36 379 aa14.52□□□□□ -0.08
USP39-218ENST00000493829 LINC00052Q96N35 136 aa14.52□□□□□ -0.08
USP39-218ENST00000493829 ZNF331Q9NQX6 463 aaPredicted RBP14.52□□□□□ -0.08
USP39-218ENST00000493829 PKD1L1Q8TDX9 2849 aa14.52□□□□□ -0.09
USP39-218ENST00000493829 TRAV25A0A0B4J276 109 aa14.52□□□□□ -0.09
USP39-218ENST00000493829 K7EQG2 157 aa14.52□□□□□ -0.09
USP39-218ENST00000493829 ICAM4Q14773 271 aa14.52□□□□□ -0.09
USP39-218ENST00000493829 SPAG8Q99932 426 aaPredicted RBP14.52□□□□□ -0.09
USP39-218ENST00000493829 RPH3ALQ9UNE2 315 aa14.52□□□□□ -0.09
USP39-218ENST00000493829 FAM74A7A6NL05 159 aa14.51□□□□□ -0.09
USP39-218ENST00000493829 GGTLC3B5MD39 225 aa14.51□□□□□ -0.09
USP39-218ENST00000493829 IFNA1P01562 189 aa14.51□□□□□ -0.09
USP39-218ENST00000493829 ATP5G3P48201 142 aa14.51□□□□□ -0.09
USP39-218ENST00000493829 PDE6HQ13956 83 aa14.51□□□□□ -0.09
USP39-218ENST00000493829 OR2K2Q8NGT1 345 aa14.51□□□□□ -0.09
USP39-218ENST00000493829 C20orf173Q96LM9 149 aa14.51□□□□□ -0.09
USP39-218ENST00000493829 SLC50A1Q9BRV3 221 aa14.51□□□□□ -0.09
USP39-218ENST00000493829 MANBALQ9NQG1 85 aa14.51□□□□□ -0.09
USP39-218ENST00000493829 OR4C46A6NHA9 309 aa14.5□□□□□ -0.09
USP39-218ENST00000493829 PSG9Q00887 426 aa14.5□□□□□ -0.09
USP39-218ENST00000493829 PSMG4Q5JS54 123 aa14.5□□□□□ -0.09
USP39-218ENST00000493829 TOR2AQ5JU69 321 aa14.5□□□□□ -0.09
USP39-218ENST00000493829 AAMDCQ9H7C9 122 aa14.5□□□□□ -0.09
USP39-218ENST00000493829 M0R3E3 92 aa14.49□□□□□ -0.09
USP39-218ENST00000493829 BCL2P10415 239 aa14.49□□□□□ -0.09
USP39-218ENST00000493829 PPT1P50897 306 aa14.49□□□□□ -0.09
USP39-218ENST00000493829 DEFB1P60022 68 aa14.49□□□□□ -0.09
USP39-218ENST00000493829 RARRES2Q99969 163 aa14.49□□□□□ -0.09
USP39-218ENST00000493829 PGPA6NDG6 321 aa14.49□□□□□ -0.09
USP39-218ENST00000493829 ZNF705FA8MVS1 300 aaPredicted RBP14.49□□□□□ -0.09
USP39-218ENST00000493829 G3V4G9 280 aa14.49□□□□□ -0.09
USP39-218ENST00000493829 ISLRO14498 428 aa14.49□□□□□ -0.09
USP39-218ENST00000493829 ZNF253O75346 499 aa14.49□□□□□ -0.09
USP39-218ENST00000493829 ID1P41134 155 aa14.49□□□□□ -0.09
USP39-218ENST00000493829 SUMO1P63165 101 aaKnown RBP14.49□□□□□ -0.09
USP39-218ENST00000493829 GNG5P63218 68 aa14.49□□□□□ -0.09
USP39-218ENST00000493829 ZNF256Q9Y2P7 627 aaPredicted RBP14.49□□□□□ -0.09
USP39-218ENST00000493829 LOC102723971A0A1B0GUV8 181 aa14.48□□□□□ -0.09
USP39-218ENST00000493829 SLC25A5P05141 298 aaKnown RBP14.48□□□□□ -0.09
USP39-218ENST00000493829 SNRPD3P62318 126 aaKnown RBP14.48□□□□□ -0.09
USP39-218ENST00000493829 ZNF738Q8NE65 137 aa14.48□□□□□ -0.09
USP39-218ENST00000493829 RXFP4Q8TDU9 374 aa14.48□□□□□ -0.09
USP39-218ENST00000493829 GPR61Q9BZJ8 451 aa14.48□□□□□ -0.09
USP39-218ENST00000493829 EIF5A2Q9GZV4 153 aaKnown RBP14.48□□□□□ -0.09
USP39-218ENST00000493829 OTORQ9NRC9 128 aa14.48□□□□□ -0.09
USP39-218ENST00000493829 NOTCH3Q9UM47 2321 aa14.47□□□□□ -0.09
USP39-218ENST00000493829 A0A1W2PRE2 83 aa14.47□□□□□ -0.09
USP39-218ENST00000493829 RBFOX3A6NFN3 312 aa14.47□□□□□ -0.09
USP39-218ENST00000493829 C11orf94C9JXX5 98 aa14.47□□□□□ -0.09
USP39-218ENST00000493829 TRAV2A0A0B4J234 112 aa14.46□□□□□ -0.09
USP39-218ENST00000493829 CD7P09564 240 aa14.46□□□□□ -0.09
USP39-218ENST00000493829 CMTM2Q8TAZ6 248 aa14.46□□□□□ -0.09
USP39-218ENST00000493829 FAM210AQ96ND0 272 aa14.46□□□□□ -0.09
USP39-218ENST00000493829 MAP6D1Q9H9H5 199 aa14.46□□□□□ -0.09
USP39-218ENST00000493829 CMYA5Q8N3K9 4069 aa14.46□□□□□ -0.1
USP39-218ENST00000493829 DEFB131AP59861 70 aa14.46□□□□□ -0.1
USP39-218ENST00000493829 CD81P60033 236 aa14.46□□□□□ -0.1
USP39-218ENST00000493829 ZNF124Q15973 351 aa14.46□□□□□ -0.1
USP39-218ENST00000493829 SAMD13Q5VXD3 122 aa14.46□□□□□ -0.1
USP39-218ENST00000493829 LYPD1Q8N2G4 141 aa14.46□□□□□ -0.1
USP39-218ENST00000493829 VAX2Q9UIW0 290 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms