RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 GPX7Q96SL4 187 aaPredicted RBP0.36□□□□□ -2.35
SMC4-223ENST00000493695 OR2J1Q9GZK6 312 aa0.36□□□□□ -2.35
SMC4-223ENST00000493695 LYRM2Q9NU23 88 aaPredicted RBP0.36□□□□□ -2.35
SMC4-223ENST00000493695 CD109Q6YHK3 1445 aa0.36□□□□□ -2.35
SMC4-223ENST00000493695 PTPRFP10586 1907 aa0.36□□□□□ -2.35
SMC4-223ENST00000493695 TET1Q8NFU7 2136 aa0.35□□□□□ -2.35
SMC4-223ENST00000493695 MGAMO43451 1857 aa0.35□□□□□ -2.35
SMC4-223ENST00000493695 A0A0D9SG42 100 aa0.35□□□□□ -2.35
SMC4-223ENST00000493695 H7C1C5 153 aa0.35□□□□□ -2.35
SMC4-223ENST00000493695 BANF1O75531 89 aa0.35□□□□□ -2.35
SMC4-223ENST00000493695 PRH1P02810 166 aa0.35□□□□□ -2.35
SMC4-223ENST00000493695 LCN6P62502 163 aa0.35□□□□□ -2.35
SMC4-223ENST00000493695 MRPS15P82914 257 aaKnown RBP0.35□□□□□ -2.35
SMC4-223ENST00000493695 PHF5AQ7RTV0 110 aaKnown RBP0.35□□□□□ -2.35
SMC4-223ENST00000493695 CHCHD1Q96BP2 118 aaKnown RBP0.35□□□□□ -2.35
SMC4-223ENST00000493695 CACYBPQ9HB71 228 aaKnown RBP0.35□□□□□ -2.35
SMC4-223ENST00000493695 TMEM138Q9NPI0 162 aa0.35□□□□□ -2.35
SMC4-223ENST00000493695 ERBINQ96RT1 1412 aa0.35□□□□□ -2.35
SMC4-223ENST00000493695 MYO5AQ9Y4I1 1855 aaKnown RBP0.35□□□□□ -2.35
SMC4-223ENST00000493695 MED12Q93074 2177 aa0.35□□□□□ -2.35
SMC4-223ENST00000493695 PIK3C2AO00443 1686 aa0.34□□□□□ -2.35
SMC4-223ENST00000493695 ADGBQ8N7X0 1667 aa0.34□□□□□ -2.35
SMC4-223ENST00000493695 FREM3P0C091 2139 aa0.34□□□□□ -2.35
SMC4-223ENST00000493695 G3V2T6 193 aa0.34□□□□□ -2.36
SMC4-223ENST00000493695 ATP5HO75947 161 aa0.34□□□□□ -2.36
SMC4-223ENST00000493695 ATG12O94817 140 aa0.34□□□□□ -2.36
SMC4-223ENST00000493695 CXCL1P09341 107 aa0.34□□□□□ -2.36
SMC4-223ENST00000493695 ARPP19P56211 112 aa0.34□□□□□ -2.36
SMC4-223ENST00000493695 AKR1C8PQ5T2L2 129 aa0.34□□□□□ -2.36
SMC4-223ENST00000493695 HACD4Q5VWC8 232 aa0.34□□□□□ -2.36
SMC4-223ENST00000493695 NUP35Q8NFH5 326 aa0.34□□□□□ -2.36
SMC4-223ENST00000493695 ZHX1-C8orf76Q96EF9 292 aa0.34□□□□□ -2.36
SMC4-223ENST00000493695 PAIP2Q9BPZ3 127 aaKnown RBP0.34□□□□□ -2.36
SMC4-223ENST00000493695 CAMSAP2Q08AD1 1489 aa0.34□□□□□ -2.36
SMC4-223ENST00000493695 N4BP2Q86UW6 1770 aaPredicted RBP0.33□□□□□ -2.36
SMC4-223ENST00000493695 RIIAD1A6NNX1 92 aa0.33□□□□□ -2.36
SMC4-223ENST00000493695 JMJD7-PLA2G4BH0Y9G9 81 aa0.33□□□□□ -2.36
SMC4-223ENST00000493695 PHBP35232 272 aa0.33□□□□□ -2.36
SMC4-223ENST00000493695 KLRD1Q13241 179 aa0.33□□□□□ -2.36
SMC4-223ENST00000493695 GINS3Q9BRX5 216 aa0.33□□□□□ -2.36
SMC4-223ENST00000493695 HSPB8Q9UJY1 196 aa0.33□□□□□ -2.36
SMC4-223ENST00000493695 BCL9O00512 1426 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 USP24Q9UPU5 2620 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 hDV103S1A0JD37 113 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 PPYP01298 95 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 IFNA1P01562 189 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 IFNA14P01570 189 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 OGNP20774 298 aaKnown RBP0.32□□□□□ -2.36
SMC4-223ENST00000493695 TMBIM6P55061 237 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 VBP1P61758 197 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 CIRBPQ14011 172 aaKnown RBP0.32□□□□□ -2.36
SMC4-223ENST00000493695 SPATA45Q537H7 98 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 SPINK9Q5DT21 86 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 ATOH7Q8N100 152 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 OR10AC1Q8NH08 325 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 CEP19Q96LK0 163 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 SMR3AQ99954 134 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 RTL8AQ9BWD3 113 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 SSR3Q9UNL2 185 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 KCPQ6ZWJ8 1503 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 MEGF8Q7Z7M0 2845 aa0.32□□□□□ -2.36
SMC4-223ENST00000493695 CHD3Q12873 2000 aaKnown RBP0.31□□□□□ -2.36
SMC4-223ENST00000493695 K7ERJ3 54 aa0.31□□□□□ -2.36
SMC4-223ENST00000493695 MFSD11O43934 449 aa0.31□□□□□ -2.36
SMC4-223ENST00000493695 IGHV3-33P01772 117 aa0.31□□□□□ -2.36
SMC4-223ENST00000493695 CSN2P05814 226 aa0.31□□□□□ -2.36
SMC4-223ENST00000493695 C1orf140Q5VVS0 124 aa0.31□□□□□ -2.36
SMC4-223ENST00000493695 OR4K15Q8NH41 348 aa0.31□□□□□ -2.36
SMC4-223ENST00000493695 MALSU1Q96EH3 234 aa0.31□□□□□ -2.36
SMC4-223ENST00000493695 C9orf170A2RU37 121 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 RER1O15258 196 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 HIST1H2BKO60814 126 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 APOA2P02652 100 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 IFNA4P05014 189 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 HIST1H2BJP06899 126 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 KRTAP2-3P0C7H8 128 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 IDO1P14902 403 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 MSMO1Q15800 293 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 LYG2Q86SG7 212 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 LRRC18Q8N456 261 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 ZNF714Q96N38 554 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 KRTAP2-4Q9BYR9 128 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 KRTAP2-1Q9BYU5 128 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 WFDC10AQ9H1F0 79 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 SS18L2Q9UHA2 77 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 MUC4Q99102 2169 aa0.3□□□□□ -2.36
SMC4-223ENST00000493695 ODAMA1E959 279 aa0.29□□□□□ -2.36
SMC4-223ENST00000493695 C5orf67F2Z3F1 127 aa0.29□□□□□ -2.36
SMC4-223ENST00000493695 GNG3P63215 75 aa0.29□□□□□ -2.36
SMC4-223ENST00000493695 RPL19P84098 196 aaKnown RBP0.29□□□□□ -2.36
SMC4-223ENST00000493695 EIF3IQ13347 325 aaKnown RBP0.29□□□□□ -2.36
SMC4-223ENST00000493695 POU6F1Q14863 301 aa0.29□□□□□ -2.36
SMC4-223ENST00000493695 FOXI2Q6ZQN5 318 aa0.29□□□□□ -2.36
SMC4-223ENST00000493695 PLEKHB2Q96CS7 222 aa0.29□□□□□ -2.36
SMC4-223ENST00000493695 MAP1LC3BQ9GZQ8 125 aa0.29□□□□□ -2.36
SMC4-223ENST00000493695 RNF11Q9Y3C5 154 aa0.29□□□□□ -2.36
SMC4-223ENST00000493695 FANCMQ8IYD8 2048 aa0.29□□□□□ -2.36
SMC4-223ENST00000493695 RTL9Q8NET4 1388 aa0.29□□□□□ -2.36
SMC4-223ENST00000493695 A0A0J9YY99 117 aa0.28□□□□□ -2.36
SMC4-223ENST00000493695 CD14P08571 375 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms