RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 AURKAIP1Q9NWT8 199 aaPredicted RBP9.3□□□□□ -0.92
HDAC1-210ENST00000490081 PLA2G2EQ9NZK7 142 aa9.3□□□□□ -0.92
HDAC1-210ENST00000490081 TRBV19A0A075B6N1 114 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 CTXND1A0A1B0GTU2 59 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 H3BQ15 152 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 CD7P09564 240 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 NBEAP1P0C6P0 100 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 NKX2-5P52952 324 aaPredicted RBP9.29□□□□□ -0.92
HDAC1-210ENST00000490081 ODF3L2Q3SX64 289 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 LYPD1Q8N2G4 141 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 GBGT1Q8N5D6 347 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 RNF141Q8WVD5 230 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 MBD3L1Q8WWY6 194 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 ZNF503Q96F45 646 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 PAXXQ9BUH6 204 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 ZNF331Q9NQX6 463 aaPredicted RBP9.29□□□□□ -0.92
HDAC1-210ENST00000490081 ZNF586Q9NXT0 402 aa9.29□□□□□ -0.92
HDAC1-210ENST00000490081 TGP01266 2768 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 CXorf1O96002 111 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 SULT1A2P50226 295 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 CD81P60033 236 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 ZNF726P1Q15940 193 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 FAM122CQ6P4D5 195 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 ARL6IP6Q8N6S5 226 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 TMED6Q8WW62 240 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 FXYD5Q96DB9 178 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 CLUHP3Q96NS8 147 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 PRR25Q96S07 402 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 SELENOKQ9Y6D0 94 aa9.28□□□□□ -0.92
HDAC1-210ENST00000490081 IGKV3-7A0A075B6H7 116 aa9.27□□□□□ -0.93
HDAC1-210ENST00000490081 TRAV8-2A0A0B4J237 113 aa9.27□□□□□ -0.93
HDAC1-210ENST00000490081 TRAV1-1A0A0B4J248 108 aa9.27□□□□□ -0.93
HDAC1-210ENST00000490081 OR11H12B2RN74 326 aa9.27□□□□□ -0.93
HDAC1-210ENST00000490081 PSG9Q00887 426 aa9.27□□□□□ -0.93
HDAC1-210ENST00000490081 WFDC3Q8IUB2 231 aa9.27□□□□□ -0.93
HDAC1-210ENST00000490081 MRPL53Q96EL3 112 aaKnown RBP9.27□□□□□ -0.93
HDAC1-210ENST00000490081 C16orf92Q96LL3 132 aa9.27□□□□□ -0.93
HDAC1-210ENST00000490081 MAP6D1Q9H9H5 199 aa9.27□□□□□ -0.93
HDAC1-210ENST00000490081 PRELID1Q9Y255 219 aa9.27□□□□□ -0.93
HDAC1-210ENST00000490081 K7EIL1 84 aa9.26□□□□□ -0.93
HDAC1-210ENST00000490081 OR7C2O60412 319 aa9.26□□□□□ -0.93
HDAC1-210ENST00000490081 NDUFB4O95168 129 aa9.26□□□□□ -0.93
HDAC1-210ENST00000490081 PYYP10082 97 aa9.26□□□□□ -0.93
HDAC1-210ENST00000490081 TFPI2P48307 235 aa9.26□□□□□ -0.93
HDAC1-210ENST00000490081 LINC00322Q6ZN03 302 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-210ENST00000490081 FAM24BQ8N5W8 94 aa9.26□□□□□ -0.93
HDAC1-210ENST00000490081 TMEM167BQ9NRX6 74 aa9.26□□□□□ -0.93
HDAC1-210ENST00000490081 BOLA2-SMG1P6H3BVE0 249 aa9.25□□□□□ -0.93
HDAC1-210ENST00000490081 ARL14EPLP0DKL9 152 aa9.25□□□□□ -0.93
HDAC1-210ENST00000490081 GCHFRP30047 84 aa9.25□□□□□ -0.93
HDAC1-210ENST00000490081 DEFB131AP59861 70 aa9.25□□□□□ -0.93
HDAC1-210ENST00000490081 PMS2P11Q13670 270 aa9.25□□□□□ -0.93
HDAC1-210ENST00000490081 PSG3Q16557 428 aa9.25□□□□□ -0.93
HDAC1-210ENST00000490081 LRRC20Q8TCA0 184 aa9.25□□□□□ -0.93
HDAC1-210ENST00000490081 A8MTW9 85 aa9.24□□□□□ -0.93
HDAC1-210ENST00000490081 ZNF688P0C7X2 276 aa9.24□□□□□ -0.93
HDAC1-210ENST00000490081 FHITP49789 147 aa9.24□□□□□ -0.93
HDAC1-210ENST00000490081 UBE2L3P68036 154 aaKnown RBP9.24□□□□□ -0.93
HDAC1-210ENST00000490081 FOXI2Q6ZQN5 318 aa9.24□□□□□ -0.93
HDAC1-210ENST00000490081 SSX7Q7RTT5 188 aa9.24□□□□□ -0.93
HDAC1-210ENST00000490081 NKX6-2Q9C056 277 aaPredicted RBP9.24□□□□□ -0.93
HDAC1-210ENST00000490081 ARL2-SNX15V9GYD0 113 aa9.24□□□□□ -0.93
HDAC1-210ENST00000490081 A0A1W2PRE2 83 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 MAP1LC3B2A6NCE7 125 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 SLC17A3O00476 420 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 H2AFB1P0C5Y9 115 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 OR10J4P0C629 311 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 IGHV4-30-4P0DP06 118 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 PSMG4Q5JS54 123 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 DEFB125Q8N687 156 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 C20orf173Q96LM9 149 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 CITED4Q96RK1 184 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 MAP1LC3BQ9GZQ8 125 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 SAV1Q9H4B6 383 aaPredicted RBP9.23□□□□□ -0.93
HDAC1-210ENST00000490081 AAMDCQ9H7C9 122 aa9.23□□□□□ -0.93
HDAC1-210ENST00000490081 KIR2DL5BA0A0G2JN68 375 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 KIR2DL5BA0A0G2JPC4 375 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 TEX46H3BTG2 121 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 HLA-DRB4P13762 266 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 PPT1P50897 306 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 BLOC1S1P78537 153 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 TEX261Q6UWH6 196 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 KIR2DL5AQ8N109 375 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 KIR2DL5BQ8NHK3 375 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 LYPD6BQ8NI32 183 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 FAM213BQ8TBF2 198 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 RXFP4Q8TDU9 374 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 SFT2D1Q8WV19 159 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 LINC00052Q96N35 136 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 OTORQ9NRC9 128 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 UBQLN2Q9UHD9 624 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 HLA-DRB4X5D2U9 266 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 AGRNO00468 2067 aa9.22□□□□□ -0.93
HDAC1-210ENST00000490081 A0A0J9YX75 114 aa9.21□□□□□ -0.94
HDAC1-210ENST00000490081 H3BMM0 161 aa9.21□□□□□ -0.94
HDAC1-210ENST00000490081 HMGB3O15347 200 aaKnown RBP9.21□□□□□ -0.94
HDAC1-210ENST00000490081 DUSP14O95147 198 aaKnown RBP9.21□□□□□ -0.94
HDAC1-210ENST00000490081 HBE1P02100 147 aa9.21□□□□□ -0.94
HDAC1-210ENST00000490081 RANP62826 216 aaKnown RBP9.21□□□□□ -0.94
HDAC1-210ENST00000490081 FAM74A1Q5RGS3 127 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms