RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 KISS1Q15726 138 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 PABPC1L2AQ5JQF8 200 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 MRPL54Q6P161 138 aaKnown RBP2.31□□□□□ -2.04
KDM3A-213ENST00000488971 ZNF322Q6U7Q0 402 aaPredicted RBP2.31□□□□□ -2.04
KDM3A-213ENST00000488971 SOSTDC1Q6X4U4 206 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 TMEM91Q6ZNR0 172 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 TEN1Q86WV5 123 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 SVBPQ8N300 66 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 LINC00311Q8N616 119 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 C5orf17Q8NAS9 161 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 DPH3Q96FX2 82 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 LINC00167Q96N53 147 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 UPK3BQ9BT76 320 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 NAA60Q9H7X0 242 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 RPRMQ9NS64 109 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 ICOSQ9Y6W8 199 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 KTN1Q86UP2 1357 aaKnown RBP2.31□□□□□ -2.04
KDM3A-213ENST00000488971 CEP162Q5TB80 1403 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 ARHGAP35Q9NRY4 1499 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 SIPA1L1O43166 1804 aa2.31□□□□□ -2.04
KDM3A-213ENST00000488971 A0A0J9YW62 118 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 LRCOL1A6NCL2 159 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 H3BMM0 161 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 C3orf84H3BNL1 204 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 RPL36A-HNRNPH2H7BZ11 118 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 SYNGR2O43760 224 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 KLF7O75840 302 aaPredicted RBP2.3□□□□□ -2.04
KDM3A-213ENST00000488971 LY6HO94772 140 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 MPC2O95563 127 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 HBDP02042 147 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 CD2P06729 351 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 SPINK8P0C7L1 97 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 MOBPQ13875 183 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 KHDC3LQ587J8 217 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 CLLU1Q5K131 121 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 NOXRED1Q6NXP6 359 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 TTC9CQ8N5M4 171 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 UBE2WQ96B02 151 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 NOP16Q9Y3C1 178 aaKnown RBP2.3□□□□□ -2.04
KDM3A-213ENST00000488971 RGS12O14924 1447 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 ADGRL2O95490 1459 aa2.3□□□□□ -2.04
KDM3A-213ENST00000488971 MAGI1Q96QZ7 1491 aaPredicted RBP2.3□□□□□ -2.04
KDM3A-213ENST00000488971 DSCAMO60469 2012 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 OBSL1O75147 1896 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 TRAV12-2A0A075B6T6 113 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.29□□□□□ -2.04
KDM3A-213ENST00000488971 A0A0B4J2C4 111 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 C17orf51A8MQB3 221 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 IFITM1P13164 125 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 LINC00315P59091 139 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 KLRD1Q13241 179 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 MIAQ16674 131 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 KPRPQ5T749 579 aaPredicted RBP2.29□□□□□ -2.04
KDM3A-213ENST00000488971 LINC01545Q5VT33 79 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 SDIM1Q6ZPB5 146 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 CLDND2Q8NHS1 167 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 SAR1AQ9NR31 198 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 OR5V1Q9UGF6 321 aa2.29□□□□□ -2.04
KDM3A-213ENST00000488971 MYH9P35579 1960 aaKnown RBP2.29□□□□□ -2.04
KDM3A-213ENST00000488971 WNK3Q9BYP7 1800 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 QRICH2Q9H0J4 1663 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 RIMBP3CA6NJZ7 1639 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 RIMBP3BA6NNM3 1639 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 TRPM1Q7Z4N2 1603 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 RIMBP3Q9UFD9 1639 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 COL1A1P02452 1464 aaPredicted RBP2.28□□□□□ -2.04
KDM3A-213ENST00000488971 RRBP1Q9P2E9 1410 aaKnown RBP2.28□□□□□ -2.04
KDM3A-213ENST00000488971 TRBV20-1A0A075B6N2 111 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 C19orf71A6NCJ1 209 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 SDCBPO00560 298 aaPredicted RBP2.28□□□□□ -2.04
KDM3A-213ENST00000488971 GEMIN2O14893 280 aaKnown RBP2.28□□□□□ -2.04
KDM3A-213ENST00000488971 CREBL2O60519 120 aaPredicted RBP2.28□□□□□ -2.04
KDM3A-213ENST00000488971 TCL1BO95988 128 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 PMP2P02689 132 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 RBP4P02753 201 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 MSMBP08118 114 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 CCL5P13501 91 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 TPT1P13693 172 aaKnown RBP2.28□□□□□ -2.04
KDM3A-213ENST00000488971 KRTAP10-1P60331 282 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 UBA52P62987 128 aaKnown RBP2.28□□□□□ -2.04
KDM3A-213ENST00000488971 ZNF90Q03938 601 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 Q56UQ5 140 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 C9orf153Q5TBE3 101 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 FOXI2Q6ZQN5 318 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 Q6ZUT4 128 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 RPRMLQ8N4K4 120 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 FAM216BQ8N7L0 139 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 PLPP5Q8NEB5 264 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 PFN4Q8NHR9 129 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 SMCR5Q8TEV8 140 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 DIRC1Q969H9 104 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 SCRT1Q9BWW7 348 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 SLC35B3Q9H1N7 401 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 C16orf95Q9H693 158 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 ZNF443Q9Y2A4 671 aaPredicted RBP2.28□□□□□ -2.04
KDM3A-213ENST00000488971 LSM2Q9Y333 95 aaKnown RBP2.28□□□□□ -2.04
KDM3A-213ENST00000488971 CHCHD2Q9Y6H1 151 aaPredicted RBP2.28□□□□□ -2.04
KDM3A-213ENST00000488971 U3KQK5 164 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 AKAP11Q9UKA4 1901 aa2.28□□□□□ -2.04
KDM3A-213ENST00000488971 NUP98P52948 1817 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms