RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 PLECQ15149 4684 aaKnown RBP-1.44□□□□□ -2.64
RBM39-234ENST00000487604 SPINK13Q1W4C9 94 aa-1.44□□□□□ -2.64
RBM39-234ENST00000487604 C1orf134Q5TEV5 83 aa-1.44□□□□□ -2.64
RBM39-234ENST00000487604 C12orf45Q8N5I9 185 aaPredicted RBP-1.44□□□□□ -2.64
RBM39-234ENST00000487604 Q96NJ1 140 aa-1.44□□□□□ -2.64
RBM39-234ENST00000487604 IMUPQ9GZP8 106 aa-1.44□□□□□ -2.64
RBM39-234ENST00000487604 CCDC90BQ9GZT6 254 aa-1.44□□□□□ -2.64
RBM39-234ENST00000487604 LPAR5Q9H1C0 372 aa-1.44□□□□□ -2.64
RBM39-234ENST00000487604 C9orf84Q5VXU9 1444 aa-1.44□□□□□ -2.64
RBM39-234ENST00000487604 FAT3Q8TDW7 4589 aa-1.44□□□□□ -2.64
RBM39-234ENST00000487604 OBSL1O75147 1896 aa-1.44□□□□□ -2.64
RBM39-234ENST00000487604 MED13LQ71F56 2210 aa-1.45□□□□□ -2.64
RBM39-234ENST00000487604 CDK6Q00534 326 aa-1.45□□□□□ -2.64
RBM39-234ENST00000487604 C8orf74Q6P047 294 aa-1.45□□□□□ -2.64
RBM39-234ENST00000487604 PDZD9Q8IXQ8 264 aa-1.45□□□□□ -2.64
RBM39-234ENST00000487604 RAB37Q96AX2 223 aa-1.45□□□□□ -2.64
RBM39-234ENST00000487604 MUCL1Q96DR8 90 aa-1.45□□□□□ -2.64
RBM39-234ENST00000487604 C2orf50Q96LR7 162 aa-1.45□□□□□ -2.64
RBM39-234ENST00000487604 UCK1Q9HA47 277 aa-1.45□□□□□ -2.64
RBM39-234ENST00000487604 SPTA1P02549 2419 aa-1.45□□□□□ -2.64
RBM39-234ENST00000487604 AP2S1P53680 142 aaPredicted RBP-1.46□□□□□ -2.64
RBM39-234ENST00000487604 HIST3H3Q16695 136 aa-1.46□□□□□ -2.64
RBM39-234ENST00000487604 ACOT6Q3I5F7 207 aaPredicted RBP-1.46□□□□□ -2.64
RBM39-234ENST00000487604 FAM172AQ8WUF8 416 aa-1.46□□□□□ -2.64
RBM39-234ENST00000487604 SLC25A21Q9BQT8 299 aaPredicted RBP-1.46□□□□□ -2.64
RBM39-234ENST00000487604 TMEM126AQ9H061 195 aa-1.46□□□□□ -2.64
RBM39-234ENST00000487604 RNF122Q9H9V4 155 aa-1.46□□□□□ -2.64
RBM39-234ENST00000487604 BOKQ9UMX3 212 aaPredicted RBP-1.46□□□□□ -2.64
RBM39-234ENST00000487604 RBBP6Q7Z6E9 1792 aaKnown RBP-1.47□□□□□ -2.64
RBM39-234ENST00000487604 DOCK4Q8N1I0 1966 aa-1.47□□□□□ -2.64
RBM39-234ENST00000487604 PRRC2CQ9Y520 2896 aaKnown RBP-1.47□□□□□ -2.64
RBM39-234ENST00000487604 CAV3P56539 151 aa-1.47□□□□□ -2.64
RBM39-234ENST00000487604 AP3S2P59780 193 aa-1.47□□□□□ -2.64
RBM39-234ENST00000487604 EIF5AP63241 154 aaKnown RBP-1.47□□□□□ -2.64
RBM39-234ENST00000487604 SPAG11BQ08648 103 aa-1.47□□□□□ -2.64
RBM39-234ENST00000487604 KLK9Q2XQG4 91 aa-1.47□□□□□ -2.64
RBM39-234ENST00000487604 PLEKHB2Q96CS7 222 aa-1.47□□□□□ -2.64
RBM39-234ENST00000487604 LIMD2Q9BT23 127 aa-1.47□□□□□ -2.64
RBM39-234ENST00000487604 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.47□□□□□ -2.65
RBM39-234ENST00000487604 DSPP15924 2871 aaKnown RBP-1.48□□□□□ -2.65
RBM39-234ENST00000487604 SPAG17Q6Q759 2223 aa-1.48□□□□□ -2.65
RBM39-234ENST00000487604 TGIF2-C20orf24A0A0A6YYL0 155 aa-1.48□□□□□ -2.65
RBM39-234ENST00000487604 NDUFB3O43676 98 aa-1.48□□□□□ -2.65
RBM39-234ENST00000487604 DCTN3O75935 186 aa-1.48□□□□□ -2.65
RBM39-234ENST00000487604 SRIP30626 198 aa-1.48□□□□□ -2.65
RBM39-234ENST00000487604 COX6A2Q02221 97 aa-1.48□□□□□ -2.65
RBM39-234ENST00000487604 OR2F1Q13607 317 aa-1.48□□□□□ -2.65
RBM39-234ENST00000487604 DEFB109BQ30KR1 87 aa-1.48□□□□□ -2.65
RBM39-234ENST00000487604 CASC2Q6XLA1 102 aa-1.48□□□□□ -2.65
RBM39-234ENST00000487604 FAM9CQ8IZT9 166 aa-1.48□□□□□ -2.65
RBM39-234ENST00000487604 NIPBLQ6KC79 2804 aaeCLIP-1.48□□□□□ -2.65
RBM39-234ENST00000487604 SPTBN1Q01082 2364 aaKnown RBP-1.48□□□□□ -2.65
RBM39-234ENST00000487604 C2CD3Q4AC94 2353 aa-1.48□□□□□ -2.65
RBM39-234ENST00000487604 TRGV10A0A0A0MS01 117 aa-1.49□□□□□ -2.65
RBM39-234ENST00000487604 FAM236DA0A1B0GTK5 79 aa-1.49□□□□□ -2.65
RBM39-234ENST00000487604 J3QRK9 145 aa-1.49□□□□□ -2.65
RBM39-234ENST00000487604 M0R233 179 aa-1.49□□□□□ -2.65
RBM39-234ENST00000487604 OR7C1O76099 320 aaPredicted RBP-1.49□□□□□ -2.65
RBM39-234ENST00000487604 SMIM17P0DL12 118 aa-1.49□□□□□ -2.65
RBM39-234ENST00000487604 FAM236CP0DP71 79 aa-1.49□□□□□ -2.65
RBM39-234ENST00000487604 PPIBP23284 216 aaKnown RBP-1.49□□□□□ -2.65
RBM39-234ENST00000487604 STAG3L4Q8TBR4 150 aa-1.49□□□□□ -2.65
RBM39-234ENST00000487604 USP9XQ93008 2570 aaPredicted RBP-1.49□□□□□ -2.65
RBM39-234ENST00000487604 COL24A1Q17RW2 1714 aa-1.49□□□□□ -2.65
RBM39-234ENST00000487604 CUBNO60494 3623 aa-1.5□□□□□ -2.65
RBM39-234ENST00000487604 C17orf112F2Z3M2 114 aa-1.5□□□□□ -2.65
RBM39-234ENST00000487604 IGLV1-51P01701 117 aa-1.5□□□□□ -2.65
RBM39-234ENST00000487604 TNNC2P02585 160 aa-1.5□□□□□ -2.65
RBM39-234ENST00000487604 SRP14P37108 136 aaKnown RBP-1.5□□□□□ -2.65
RBM39-234ENST00000487604 C22orf39Q6P5X5 142 aa-1.5□□□□□ -2.65
RBM39-234ENST00000487604 AKAP13Q12802 2813 aa-1.5□□□□□ -2.65
RBM39-234ENST00000487604 PTPRDP23468 1912 aa-1.5□□□□□ -2.65
RBM39-234ENST00000487604 SPTBN4Q9H254 2564 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 PCNX1Q96RV3 2341 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 A0A0A6YYH2 397 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 A6NJ64 397 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 DEXIO95424 95 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 ETV6P41212 452 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 GLYATL3Q5SZD4 288 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 PATE2Q6UY27 113 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 ARPINQ7Z6K5 226 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 NAT14Q8WUY8 206 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 NOSIPQ9Y314 301 aaKnown RBP-1.51□□□□□ -2.65
RBM39-234ENST00000487604 NCOA1Q15788 1441 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 WDR87Q6ZQQ6 2873 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 GVINP1Q7Z2Y8 2422 aa-1.51□□□□□ -2.65
RBM39-234ENST00000487604 MYLKQ15746 1914 aa-1.52□□□□□ -2.65
RBM39-234ENST00000487604 HTTP42858 3142 aa-1.52□□□□□ -2.65
RBM39-234ENST00000487604 F5P12259 2224 aa-1.52□□□□□ -2.65
RBM39-234ENST00000487604 CHP2O43745 196 aa-1.52□□□□□ -2.65
RBM39-234ENST00000487604 FAM151BQ6UXP7 276 aa-1.52□□□□□ -2.65
RBM39-234ENST00000487604 C10orf111Q8N326 155 aa-1.52□□□□□ -2.65
RBM39-234ENST00000487604 POP5Q969H6 163 aaKnown RBP-1.52□□□□□ -2.65
RBM39-234ENST00000487604 AKAP9Q99996 3911 aa-1.52□□□□□ -2.65
RBM39-234ENST00000487604 LAMC1P11047 1609 aa-1.52□□□□□ -2.65
RBM39-234ENST00000487604 PKD1P98161 4303 aa-1.52□□□□□ -2.65
RBM39-234ENST00000487604 ANK3Q12955 4377 aaKnown RBP-1.52□□□□□ -2.65
RBM39-234ENST00000487604 LAMA3Q16787 3333 aa-1.53□□□□□ -2.65
RBM39-234ENST00000487604 TGOLN2O43493 480 aa-1.53□□□□□ -2.65
RBM39-234ENST00000487604 TTRP02766 147 aa-1.53□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms