RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 ATF4P18848 351 aaPredicted RBP7.18□□□□□ -1.26
MCF2L-227ENST00000486806 FGF8P55075 233 aaPredicted RBP7.18□□□□□ -1.26
MCF2L-227ENST00000486806 PDE6HQ13956 83 aa7.18□□□□□ -1.26
MCF2L-227ENST00000486806 GUK1Q16774 197 aa7.18□□□□□ -1.26
MCF2L-227ENST00000486806 LCN12Q6JVE5 192 aa7.18□□□□□ -1.26
MCF2L-227ENST00000486806 RBPMS2Q6ZRY4 209 aaKnown RBP7.18□□□□□ -1.26
MCF2L-227ENST00000486806 SFT2D1Q8WV19 159 aa7.18□□□□□ -1.26
MCF2L-227ENST00000486806 SPAG8Q99932 426 aaPredicted RBP7.18□□□□□ -1.26
MCF2L-227ENST00000486806 ZNF256Q9Y2P7 627 aaPredicted RBP7.18□□□□□ -1.26
MCF2L-227ENST00000486806 TRAV8-2A0A0B4J237 113 aa7.17□□□□□ -1.26
MCF2L-227ENST00000486806 ZNF785A8K8V0 405 aa7.17□□□□□ -1.26
MCF2L-227ENST00000486806 K7EQG2 157 aa7.17□□□□□ -1.26
MCF2L-227ENST00000486806 HBE1P02100 147 aa7.17□□□□□ -1.26
MCF2L-227ENST00000486806 SNRPCP09234 159 aaKnown RBP7.17□□□□□ -1.26
MCF2L-227ENST00000486806 RPL11P62913 178 aaKnown RBP7.17□□□□□ -1.26
MCF2L-227ENST00000486806 BLOC1S1P78537 153 aa7.17□□□□□ -1.26
MCF2L-227ENST00000486806 EGFEM1PQ0D2K5 195 aa7.17□□□□□ -1.26
MCF2L-227ENST00000486806 OXLD1Q5BKU9 147 aa7.17□□□□□ -1.26
MCF2L-227ENST00000486806 SAMD5Q5TGI4 173 aa7.17□□□□□ -1.26
MCF2L-227ENST00000486806 SAMD13Q5VXD3 122 aa7.17□□□□□ -1.26
MCF2L-227ENST00000486806 TMPRSS5Q9H3S3 457 aa7.17□□□□□ -1.26
MCF2L-227ENST00000486806 ZNF331Q9NQX6 463 aaPredicted RBP7.17□□□□□ -1.26
MCF2L-227ENST00000486806 TMEM167BQ9NRX6 74 aa7.17□□□□□ -1.26
MCF2L-227ENST00000486806 IGKV3-7A0A075B6H7 116 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 A0A1B0GV50 99 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 H3BTX0 84 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 NBEAP1P0C6P0 100 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 PSMB3P49720 205 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 PAFAH1B2P68402 229 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 CCL20P78556 96 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 BEAN1Q3B7T3 259 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 GBGT1Q8N5D6 347 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 FAM24BQ8N5W8 94 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 PCNPQ8WW12 178 aaKnown RBP7.16□□□□□ -1.26
MCF2L-227ENST00000486806 SLC50A1Q9BRV3 221 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 ARL2-SNX15V9GYD0 113 aa7.16□□□□□ -1.26
MCF2L-227ENST00000486806 OR4C46A6NHA9 309 aa7.15□□□□□ -1.26
MCF2L-227ENST00000486806 GGTLC3B5MD39 225 aa7.15□□□□□ -1.26
MCF2L-227ENST00000486806 G3V4G9 280 aa7.15□□□□□ -1.26
MCF2L-227ENST00000486806 TEX46H3BTG2 121 aa7.15□□□□□ -1.26
MCF2L-227ENST00000486806 ISLRO14498 428 aa7.15□□□□□ -1.26
MCF2L-227ENST00000486806 TFPI2P48307 235 aa7.15□□□□□ -1.26
MCF2L-227ENST00000486806 PMS2P11Q13670 270 aa7.15□□□□□ -1.26
MCF2L-227ENST00000486806 CLLU1Q5K131 121 aa7.15□□□□□ -1.26
MCF2L-227ENST00000486806 IQCF2Q8IXL9 164 aa7.15□□□□□ -1.26
MCF2L-227ENST00000486806 LYPD1Q8N2G4 141 aa7.15□□□□□ -1.26
MCF2L-227ENST00000486806 BLNKQ8WV28 456 aa7.15□□□□□ -1.26
MCF2L-227ENST00000486806 YTHDF2Q9Y5A9 579 aaKnown RBP7.15□□□□□ -1.26
MCF2L-227ENST00000486806 A0A1W2PRE2 83 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 FAM74A7A6NL05 159 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 DNASE2O00115 360 aaPredicted RBP7.14□□□□□ -1.27
MCF2L-227ENST00000486806 PPT1P50897 306 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 KRTAP10-11P60412 298 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 PSG9Q00887 426 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 GUCA2BQ16661 112 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 ODF3L2Q3SX64 289 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 KPRPQ5T749 579 aaPredicted RBP7.14□□□□□ -1.27
MCF2L-227ENST00000486806 WFDC3Q8IUB2 231 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 MRPL53Q96EL3 112 aaKnown RBP7.14□□□□□ -1.27
MCF2L-227ENST00000486806 C16orf92Q96LL3 132 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 C20orf173Q96LM9 149 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 FAM110AQ9BQ89 295 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 Q9H3A6 140 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 OTORQ9NRC9 128 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 C19orf73Q9NVV2 129 aa7.14□□□□□ -1.27
MCF2L-227ENST00000486806 ZNF688P0C7X2 276 aa7.13□□□□□ -1.27
MCF2L-227ENST00000486806 HLA-DMBP28068 263 aa7.13□□□□□ -1.27
MCF2L-227ENST00000486806 UBE2G2P60604 165 aa7.13□□□□□ -1.27
MCF2L-227ENST00000486806 SNRPD3P62318 126 aaKnown RBP7.13□□□□□ -1.27
MCF2L-227ENST00000486806 RANP62826 216 aaKnown RBP7.13□□□□□ -1.27
MCF2L-227ENST00000486806 IGFL4Q6B9Z1 124 aa7.13□□□□□ -1.27
MCF2L-227ENST00000486806 CCDC28AQ8IWP9 274 aa7.13□□□□□ -1.27
MCF2L-227ENST00000486806 EXOC3-AS1Q8N2X6 119 aa7.13□□□□□ -1.27
MCF2L-227ENST00000486806 RNF182Q8N6D2 247 aa7.13□□□□□ -1.27
MCF2L-227ENST00000486806 MAP6D1Q9H9H5 199 aa7.13□□□□□ -1.27
MCF2L-227ENST00000486806 MANBALQ9NQG1 85 aa7.13□□□□□ -1.27
MCF2L-227ENST00000486806 CLEC5AQ9NY25 188 aa7.13□□□□□ -1.27
MCF2L-227ENST00000486806 GNG13Q9P2W3 67 aa7.13□□□□□ -1.27
MCF2L-227ENST00000486806 PKD1L1Q8TDX9 2849 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 M0R3E3 92 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 PAGE4O60829 102 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 CD7P09564 240 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 BCL2P10415 239 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 ID1P41134 155 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 ATP5G3P48201 142 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 RAB14P61106 215 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 ICAM4Q14773 271 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 PSG3Q16557 428 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 PSMG4Q5JS54 123 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 AAMDCQ9H7C9 122 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 PRELID1Q9Y255 219 aa7.12□□□□□ -1.27
MCF2L-227ENST00000486806 LOC102723971A0A1B0GUV8 181 aa7.11□□□□□ -1.27
MCF2L-227ENST00000486806 PGPA6NDG6 321 aa7.11□□□□□ -1.27
MCF2L-227ENST00000486806 IFNA1P01562 189 aa7.11□□□□□ -1.27
MCF2L-227ENST00000486806 TAGLN2P37802 199 aaKnown RBP7.11□□□□□ -1.27
MCF2L-227ENST00000486806 DEFB131AP59861 70 aa7.11□□□□□ -1.27
MCF2L-227ENST00000486806 CD81P60033 236 aa7.11□□□□□ -1.27
MCF2L-227ENST00000486806 ARL6IP6Q8N6S5 226 aa7.11□□□□□ -1.27
MCF2L-227ENST00000486806 C5orf17Q8NAS9 161 aa7.11□□□□□ -1.27
MCF2L-227ENST00000486806 FAM210AQ96ND0 272 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms