RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ZNF355PQ9NSJ1 428 aa7.16□□□□□ -1.26
TMEM39A-208ENST00000486159 MRPL36Q9P0J6 103 aaKnown RBP7.16□□□□□ -1.26
TMEM39A-208ENST00000486159 ZNF580Q9UK33 172 aa7.16□□□□□ -1.26
TMEM39A-208ENST00000486159 DNAH7Q8WXX0 4024 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 H3BUA1 57 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 PPP1R2P9O14990 202 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 GNG7O60262 68 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 SAP30O75446 220 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 FRMD6-AS1P0C7T7 363 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 RD3LP0DJH9 198 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 FOLR2P14207 255 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 GATA2P23769 480 aaPredicted RBP7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 TMEM88Q6PEY1 159 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 UNQ5815/PRO19632Q6UWF5 114 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 PATE2Q6UY27 113 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 LINC00305Q7Z4B0 112 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 CBLN2Q8IUK8 224 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 ANAPC16Q96DE5 110 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 RCHY1Q96PM5 261 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 PAXXQ9BUH6 204 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 SLC25A2Q9BXI2 301 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 C21orf62Q9NYP8 219 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 TMEM14CQ9P0S9 112 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 HIGD1AQ9Y241 93 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 SMAD5-AS1Q9Y6J3 95 aa7.15□□□□□ -1.26
TMEM39A-208ENST00000486159 STARD9Q9P2P6 4700 aa7.15□□□□□ -1.27
TMEM39A-208ENST00000486159 HERC2O95714 4834 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 TRBV9A0A0B4J1U6 114 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 COLCA2A8K830 154 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 C9JCJ5 164 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 LINC01619G3V211 115 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 NUPL2O15504 423 aaKnown RBP7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 TGOLN2O43493 480 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 OR2C1O95371 312 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 IGKV1-17P01599 117 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 APELAP0DMC3 54 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 PSG1P11464 419 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 GP9P14770 177 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 ATP5G3P48201 142 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 UBE2G2P60604 165 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 UBE2L3P68036 154 aaKnown RBP7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 CASC10Q5T4H9 136 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 NECAP1Q8NC96 275 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 OR5T1Q8NG75 326 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 OR1B1Q8NGR6 318 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 Q8WTZ3 238 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 BTF3L4Q96K17 158 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 C20orf24Q9BUV8 137 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 MRPL27Q9P0M9 148 aaKnown RBP7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 TMA7Q9Y2S6 64 aaKnown RBP7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 YTHDF2Q9Y5A9 579 aaKnown RBP7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 TENM3Q9P273 2699 aa7.14□□□□□ -1.27
TMEM39A-208ENST00000486159 TRBV7-1A0A0A6YYK4 115 aa7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 FAM223BA6NKX1 122 aa7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 EIF3GO75821 320 aaKnown RBP eCLIP7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 NDUFB4O95168 129 aa7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 IGHV3-48P01763 117 aa7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 S100A9P06702 114 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 LGALS1P09382 135 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 ORM2P19652 201 aa7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 RPL23P62829 140 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 ZNF674Q2M3X9 581 aa7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 TIGITQ495A1 244 aa7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 FAM223AQ8IWN6 122 aa7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 Q8N1Y9 231 aa7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 ZNF503Q96F45 646 aa7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 ZMAT5Q9UDW3 170 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 FBXL7Q9UJT9 491 aa7.13□□□□□ -1.27
TMEM39A-208ENST00000486159 EIF4EBP3O60516 100 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 NDUFB8O95169 186 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 TRBV12-3P01733 135 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 HIST1H1EP10412 219 aaKnown RBP7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 NPPCP23582 126 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 TPPP2P59282 170 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 TAS2R60P59551 318 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 ADIRFQ15847 76 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 Q56UQ5 140 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 FAM209BQ5JX69 171 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 ZFAND6Q6FIF0 208 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 C19orf35Q6ZS72 473 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 MUC7Q8TAX7 377 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 HIST1H2BAQ96A08 127 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 EEF1AKMT3Q96AZ1 226 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 FXYD5Q96DB9 178 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 RNF125Q96EQ8 232 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 IMMP2LQ96T52 175 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 SHANK2-AS3Q9BTD1 123 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 SORL1Q92673 2214 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 TENM2Q9NT68 2774 aa7.12□□□□□ -1.27
TMEM39A-208ENST00000486159 IGHV3-21A0A0B4J1V1 117 aa7.11□□□□□ -1.27
TMEM39A-208ENST00000486159 SCO2A0A1W2PP80 73 aa7.11□□□□□ -1.27
TMEM39A-208ENST00000486159 HELTA6NFD8 242 aa7.11□□□□□ -1.27
TMEM39A-208ENST00000486159 C3orf84H3BNL1 204 aa7.11□□□□□ -1.27
TMEM39A-208ENST00000486159 FAM229AH3BQW9 127 aa7.11□□□□□ -1.27
TMEM39A-208ENST00000486159 H3BRN7 92 aa7.11□□□□□ -1.27
TMEM39A-208ENST00000486159 OR2J3O76001 311 aa7.11□□□□□ -1.27
TMEM39A-208ENST00000486159 TRGV3P03979 118 aa7.11□□□□□ -1.27
TMEM39A-208ENST00000486159 NBEAP1P0C6P0 100 aa7.11□□□□□ -1.27
TMEM39A-208ENST00000486159 ATF4P18848 351 aaPredicted RBP7.11□□□□□ -1.27
TMEM39A-208ENST00000486159 RAB5AP20339 215 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms