RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 GAGE12FP0CL80 117 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 GAGE12GP0CL81 117 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 GAGE12IP0CL82 117 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 DNAH10OSP0CZ25 163 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 PRB4P10163 310 aaPredicted RBP13.12□□□□□ -0.31
CHRD-216ENST00000486066 RPL7P18124 248 aaKnown RBP13.12□□□□□ -0.31
CHRD-216ENST00000486066 FGL1Q08830 312 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 ICAM4Q14773 271 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 CTF1Q16619 201 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 GFI1BQ5VTD9 330 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 ACOT7LQ6ZUV0 252 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 TNFRSF18Q9Y5U5 241 aa13.12□□□□□ -0.31
CHRD-216ENST00000486066 SMR3BP02814 79 aaPredicted RBP13.11□□□□□ -0.31
CHRD-216ENST00000486066 SLC25A6P12236 298 aa13.11□□□□□ -0.31
CHRD-216ENST00000486066 DAZ2Q13117 558 aaKnown RBP13.11□□□□□ -0.31
CHRD-216ENST00000486066 RPUSD4Q96CM3 377 aaKnown RBP13.11□□□□□ -0.31
CHRD-216ENST00000486066 VCX3AQ9NNX9 186 aa13.11□□□□□ -0.31
CHRD-216ENST00000486066 DUXBA0A1W2PPF3 345 aa13.1□□□□□ -0.31
CHRD-216ENST00000486066 CTDSPLO15194 276 aa13.1□□□□□ -0.31
CHRD-216ENST00000486066 RLN2P04090 185 aa13.1□□□□□ -0.31
CHRD-216ENST00000486066 S100A7P31151 101 aa13.1□□□□□ -0.31
CHRD-216ENST00000486066 SRPXP78539 464 aa13.1□□□□□ -0.31
CHRD-216ENST00000486066 PARD6GQ9BYG4 376 aaPredicted RBP13.1□□□□□ -0.31
CHRD-216ENST00000486066 NAA50Q9GZZ1 169 aaKnown RBP13.1□□□□□ -0.31
CHRD-216ENST00000486066 ANKRD20A5PA0PJZ0 165 aa13.09□□□□□ -0.31
CHRD-216ENST00000486066 EREGO14944 169 aa13.09□□□□□ -0.31
CHRD-216ENST00000486066 Q6ZTI0 123 aa13.09□□□□□ -0.31
CHRD-216ENST00000486066 CLVS1Q8IUQ0 354 aaPredicted RBP13.09□□□□□ -0.31
CHRD-216ENST00000486066 LRTM2Q8N967 370 aa13.09□□□□□ -0.31
CHRD-216ENST00000486066 ZBTB8BQ8NAP8 495 aaPredicted RBP13.09□□□□□ -0.31
CHRD-216ENST00000486066 HIGD1AQ9Y241 93 aa13.09□□□□□ -0.31
CHRD-216ENST00000486066 C4orf46Q504U0 113 aa13.08□□□□□ -0.32
CHRD-216ENST00000486066 PATE2Q6UY27 113 aa13.08□□□□□ -0.32
CHRD-216ENST00000486066 CYP2G1PQ6ZSU1 146 aa13.08□□□□□ -0.32
CHRD-216ENST00000486066 CIB3Q96Q77 187 aaPredicted RBP13.08□□□□□ -0.32
CHRD-216ENST00000486066 ZNF331Q9NQX6 463 aaPredicted RBP13.08□□□□□ -0.32
CHRD-216ENST00000486066 PPP1R14DQ9NXH3 145 aa13.08□□□□□ -0.32
CHRD-216ENST00000486066 PRAC2D3DTV9 90 aa13.07□□□□□ -0.32
CHRD-216ENST00000486066 NXPH4O95158 308 aa13.07□□□□□ -0.32
CHRD-216ENST00000486066 CXCL2P19875 107 aa13.07□□□□□ -0.32
CHRD-216ENST00000486066 PMS2P5A8MQ11 134 aa13.06□□□□□ -0.32
CHRD-216ENST00000486066 SNURFLB1AK76 121 aa13.06□□□□□ -0.32
CHRD-216ENST00000486066 CTDSP2O14595 271 aa13.06□□□□□ -0.32
CHRD-216ENST00000486066 SYNGR2O43760 224 aa13.06□□□□□ -0.32
CHRD-216ENST00000486066 HYPMO75409 117 aa13.06□□□□□ -0.32
CHRD-216ENST00000486066 RAP2BP61225 183 aa13.06□□□□□ -0.32
CHRD-216ENST00000486066 TMED4Q7Z7H5 227 aa13.06□□□□□ -0.32
CHRD-216ENST00000486066 CCDC28AQ8IWP9 274 aa13.06□□□□□ -0.32
CHRD-216ENST00000486066 C11orf72Q8NBR9 251 aa13.06□□□□□ -0.32
CHRD-216ENST00000486066 SCGB3A2Q96PL1 93 aa13.06□□□□□ -0.32
CHRD-216ENST00000486066 PAIP2BQ9ULR5 123 aaKnown RBP13.06□□□□□ -0.32
CHRD-216ENST00000486066 PKHD1L1Q86WI1 4243 aa13.06□□□□□ -0.32
CHRD-216ENST00000486066 K7EPK0 472 aa13.05□□□□□ -0.32
CHRD-216ENST00000486066 MED6O75586 246 aa13.05□□□□□ -0.32
CHRD-216ENST00000486066 IFNA5P01569 189 aa13.05□□□□□ -0.32
CHRD-216ENST00000486066 LINC00869P0C866 280 aa13.05□□□□□ -0.32
CHRD-216ENST00000486066 ANXA3P12429 323 aa13.05□□□□□ -0.32
CHRD-216ENST00000486066 AKR1C1Q04828 323 aa13.05□□□□□ -0.32
CHRD-216ENST00000486066 Q6ZSN1 163 aa13.05□□□□□ -0.32
CHRD-216ENST00000486066 NFE4Q86UQ8 179 aa13.05□□□□□ -0.32
CHRD-216ENST00000486066 SCP2D1Q9UJQ7 156 aa13.05□□□□□ -0.32
CHRD-216ENST00000486066 PIGBOS1A0A0B4J2F0 54 aa13.04□□□□□ -0.32
CHRD-216ENST00000486066 LINC00854A0A1B0GVQ3 168 aa13.04□□□□□ -0.32
CHRD-216ENST00000486066 FAM229AH3BQW9 127 aa13.04□□□□□ -0.32
CHRD-216ENST00000486066 WRBO00258 174 aa13.04□□□□□ -0.32
CHRD-216ENST00000486066 IL5P05113 134 aa13.04□□□□□ -0.32
CHRD-216ENST00000486066 GCSHP23434 173 aa13.04□□□□□ -0.32
CHRD-216ENST00000486066 RPP30P78346 268 aaKnown RBP13.04□□□□□ -0.32
CHRD-216ENST00000486066 LCN15Q6UWW0 184 aa13.04□□□□□ -0.32
CHRD-216ENST00000486066 ODF3Q96PU9 254 aa13.04□□□□□ -0.32
CHRD-216ENST00000486066 SELENOTP62341 195 aa13.03□□□□□ -0.32
CHRD-216ENST00000486066 HAMPP81172 84 aa13.03□□□□□ -0.32
CHRD-216ENST00000486066 ZNF431Q8TF32 576 aaPredicted RBP13.03□□□□□ -0.32
CHRD-216ENST00000486066 PYGO2Q9BRQ0 406 aa13.03□□□□□ -0.32
CHRD-216ENST00000486066 SLC50A1Q9BRV3 221 aa13.03□□□□□ -0.32
CHRD-216ENST00000486066 H3BP45 60 aa13.02□□□□□ -0.33
CHRD-216ENST00000486066 SLC17A3O00476 420 aa13.02□□□□□ -0.33
CHRD-216ENST00000486066 ZNF324O75467 553 aaPredicted RBP13.02□□□□□ -0.33
CHRD-216ENST00000486066 CT45A10P0DMU9 189 aa13.02□□□□□ -0.33
CHRD-216ENST00000486066 SPANXN5Q5MJ07 72 aa13.02□□□□□ -0.33
CHRD-216ENST00000486066 TEPPQ6URK8 271 aa13.02□□□□□ -0.33
CHRD-216ENST00000486066 TMEM70Q9BUB7 260 aa13.02□□□□□ -0.33
CHRD-216ENST00000486066 KRTAP29-1A8MX34 341 aaPredicted RBP13.01□□□□□ -0.33
CHRD-216ENST00000486066 OR5G3P0C626 314 aa13.01□□□□□ -0.33
CHRD-216ENST00000486066 TMEM128Q5BJH2 165 aa13.01□□□□□ -0.33
CHRD-216ENST00000486066 LYPD5Q6UWN5 251 aa13.01□□□□□ -0.33
CHRD-216ENST00000486066 LRRC20Q8TCA0 184 aa13.01□□□□□ -0.33
CHRD-216ENST00000486066 SAT2Q96F10 170 aaPredicted RBP13.01□□□□□ -0.33
CHRD-216ENST00000486066 LINC00467Q9BRT7 94 aa13.01□□□□□ -0.33
CHRD-216ENST00000486066 ARV1Q9H2C2 271 aa13.01□□□□□ -0.33
CHRD-216ENST00000486066 RABL2BQ9UNT1 228 aa13.01□□□□□ -0.33
CHRD-216ENST00000486066 STRAPQ9Y3F4 350 aaKnown RBP13.01□□□□□ -0.33
CHRD-216ENST00000486066 TRAV12-3A0A0B4J271 114 aa13□□□□□ -0.33
CHRD-216ENST00000486066 NPIPB6E9PJ23 425 aa13□□□□□ -0.33
CHRD-216ENST00000486066 SPINK4O60575 86 aa13□□□□□ -0.33
CHRD-216ENST00000486066 SOSTQ9BQB4 213 aa13□□□□□ -0.33
CHRD-216ENST00000486066 GSN-AS1Q9NRJ2 163 aa13□□□□□ -0.33
CHRD-216ENST00000486066 RABL2AQ9UBK7 228 aaPredicted RBP13□□□□□ -0.33
CHRD-216ENST00000486066 ICOSQ9Y6W8 199 aa13□□□□□ -0.33
CHRD-216ENST00000486066 J3QL48 77 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms