RNA–Protein interactions for RNA: ENST00000482086.5

PCCB-215, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-215ENST00000482086 ZNF586Q9NXT0 402 aa11.09□□□□□ -0.63
PCCB-215ENST00000482086 CLEC5AQ9NY25 188 aa11.09□□□□□ -0.63
PCCB-215ENST00000482086 FBN1P35555 2871 aaKnown RBP11.09□□□□□ -0.63
PCCB-215ENST00000482086 FAM74A7A6NL05 159 aa11.09□□□□□ -0.63
PCCB-215ENST00000482086 H3BQ15 152 aa11.09□□□□□ -0.63
PCCB-215ENST00000482086 CSN3P07498 182 aa11.09□□□□□ -0.63
PCCB-215ENST00000482086 UBE2G2P60604 165 aa11.09□□□□□ -0.63
PCCB-215ENST00000482086 MEF2BQ02080 365 aaPredicted RBP11.09□□□□□ -0.63
PCCB-215ENST00000482086 CST9LP1Q5W188 147 aa11.09□□□□□ -0.63
PCCB-215ENST00000482086 TCEAL7Q9BRU2 100 aa11.09□□□□□ -0.63
PCCB-215ENST00000482086 SLC50A1Q9BRV3 221 aa11.09□□□□□ -0.63
PCCB-215ENST00000482086 C11orf94C9JXX5 98 aa11.08□□□□□ -0.64
PCCB-215ENST00000482086 PDE6DO43924 150 aa11.08□□□□□ -0.64
PCCB-215ENST00000482086 RPL11P62913 178 aaKnown RBP11.08□□□□□ -0.64
PCCB-215ENST00000482086 TCF24Q7RTU0 167 aa11.08□□□□□ -0.64
PCCB-215ENST00000482086 DYNLRB2Q8TF09 96 aa11.08□□□□□ -0.64
PCCB-215ENST00000482086 AAMDCQ9H7C9 122 aa11.08□□□□□ -0.64
PCCB-215ENST00000482086 SMAD5-AS1Q9Y6J3 95 aa11.08□□□□□ -0.64
PCCB-215ENST00000482086 STAB1Q9NY15 2570 aa11.07□□□□□ -0.64
PCCB-215ENST00000482086 RANP62826 216 aaKnown RBP11.07□□□□□ -0.64
PCCB-215ENST00000482086 ICAM4Q14773 271 aa11.07□□□□□ -0.64
PCCB-215ENST00000482086 RXFP4Q8TDU9 374 aa11.07□□□□□ -0.64
PCCB-215ENST00000482086 RARRES2Q99969 163 aa11.07□□□□□ -0.64
PCCB-215ENST00000482086 TREM1Q9NP99 234 aa11.07□□□□□ -0.64
PCCB-215ENST00000482086 NRN1Q9NPD7 142 aa11.07□□□□□ -0.64
PCCB-215ENST00000482086 OTORQ9NRC9 128 aa11.07□□□□□ -0.64
PCCB-215ENST00000482086 YTHDF2Q9Y5A9 579 aaKnown RBP11.07□□□□□ -0.64
PCCB-215ENST00000482086 F6UZH7 168 aa11.06□□□□□ -0.64
PCCB-215ENST00000482086 SUMO1P63165 101 aaKnown RBP11.06□□□□□ -0.64
PCCB-215ENST00000482086 PAFAH1B2P68402 229 aa11.06□□□□□ -0.64
PCCB-215ENST00000482086 FAM90A2PQ658T7 463 aa11.06□□□□□ -0.64
PCCB-215ENST00000482086 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.06□□□□□ -0.64
PCCB-215ENST00000482086 SLC7A5P1Q8MH63 180 aa11.06□□□□□ -0.64
PCCB-215ENST00000482086 ARL6IP6Q8N6S5 226 aa11.06□□□□□ -0.64
PCCB-215ENST00000482086 LINC00482Q8N8I6 264 aa11.06□□□□□ -0.64
PCCB-215ENST00000482086 Q9H3A6 140 aa11.06□□□□□ -0.64
PCCB-215ENST00000482086 PRELID1Q9Y255 219 aa11.06□□□□□ -0.64
PCCB-215ENST00000482086 TRAV25A0A0B4J276 109 aa11.05□□□□□ -0.64
PCCB-215ENST00000482086 TMEM250H0YL14 139 aa11.05□□□□□ -0.64
PCCB-215ENST00000482086 NDUFB4O95168 129 aa11.05□□□□□ -0.64
PCCB-215ENST00000482086 RBPMS2Q6ZRY4 209 aaKnown RBP11.05□□□□□ -0.64
PCCB-215ENST00000482086 LURAP1LQ8IV03 231 aa11.05□□□□□ -0.64
PCCB-215ENST00000482086 CMTM2Q8TAZ6 248 aa11.05□□□□□ -0.64
PCCB-215ENST00000482086 SLC35B3Q9H1N7 401 aa11.05□□□□□ -0.64
PCCB-215ENST00000482086 MLXQ9UH92 298 aa11.05□□□□□ -0.64
PCCB-215ENST00000482086 TRAV2A0A0B4J234 112 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 PGPA6NDG6 321 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 SNRPCP09234 159 aaKnown RBP11.04□□□□□ -0.64
PCCB-215ENST00000482086 EDN2P20800 178 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 ID1P41134 155 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 CD81P60033 236 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 DEFB114Q30KQ6 69 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 ADAMTSL5Q6ZMM2 481 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 CCDC28AQ8IWP9 274 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 C5orf17Q8NAS9 161 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 OR2K2Q8NGT1 345 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 HIST1H2BAQ96A08 127 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 RPUSD4Q96CM3 377 aaKnown RBP11.04□□□□□ -0.64
PCCB-215ENST00000482086 C16orf92Q96LL3 132 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 C17orf77Q96MU5 243 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 CITED4Q96RK1 184 aa11.04□□□□□ -0.64
PCCB-215ENST00000482086 ZNF331Q9NQX6 463 aaPredicted RBP11.04□□□□□ -0.64
PCCB-215ENST00000482086 GGTLC3B5MD39 225 aa11.03□□□□□ -0.64
PCCB-215ENST00000482086 H3BTX0 84 aa11.03□□□□□ -0.64
PCCB-215ENST00000482086 DNASE2O00115 360 aaPredicted RBP11.03□□□□□ -0.64
PCCB-215ENST00000482086 ISLRO14498 428 aa11.03□□□□□ -0.64
PCCB-215ENST00000482086 SLC25A5P05141 298 aaKnown RBP11.03□□□□□ -0.64
PCCB-215ENST00000482086 SRP19P09132 144 aaKnown RBP11.03□□□□□ -0.64
PCCB-215ENST00000482086 CSN1S1P47710 185 aa11.03□□□□□ -0.64
PCCB-215ENST00000482086 ATP5G3P48201 142 aa11.03□□□□□ -0.64
PCCB-215ENST00000482086 INSL3P51460 131 aa11.03□□□□□ -0.64
PCCB-215ENST00000482086 SRSF3P84103 164 aaKnown RBP11.03□□□□□ -0.64
PCCB-215ENST00000482086 MCRIP2Q9BUT9 160 aaKnown RBP11.03□□□□□ -0.64
PCCB-215ENST00000482086 SLC17A3O00476 420 aa11.02□□□□□ -0.64
PCCB-215ENST00000482086 TSPAN4O14817 238 aa11.02□□□□□ -0.64
PCCB-215ENST00000482086 SAP30O75446 220 aa11.02□□□□□ -0.64
PCCB-215ENST00000482086 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.64
PCCB-215ENST00000482086 MS4A6AQ9H2W1 248 aa11.02□□□□□ -0.64
PCCB-215ENST00000482086 SERTM2A0A1B0GWG4 89 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 K7EQM0 130 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 EXOC3-AS1Q8N2X6 119 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 C11orf52Q96A22 123 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 SPAG8Q99932 426 aaPredicted RBP11.01□□□□□ -0.65
PCCB-215ENST00000482086 EPDR1Q9UM22 224 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 TMEM218A2RU14 115 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 KRBOX1C9JBD0 128 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 SOCS3O14543 225 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 S100A9P06702 114 aaKnown RBP11.01□□□□□ -0.65
PCCB-215ENST00000482086 CD33P20138 364 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 RIPPLY3P57055 190 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 SNRPD3P62318 126 aaKnown RBP11.01□□□□□ -0.65
PCCB-215ENST00000482086 FAM74A3Q4VXF1 159 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 C9orf66Q5T8R8 295 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 DCANP1Q8TF63 244 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 ATG101Q9BSB4 218 aa11.01□□□□□ -0.65
PCCB-215ENST00000482086 VWFP04275 2813 aa11□□□□□ -0.65
PCCB-215ENST00000482086 SORL1Q92673 2214 aa11□□□□□ -0.65
PCCB-215ENST00000482086 IGKV3-7A0A075B6H7 116 aa11□□□□□ -0.65
PCCB-215ENST00000482086 K7EQG2 157 aa11□□□□□ -0.65
PCCB-215ENST00000482086 PEX7O00628 323 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms