RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 KRTDAPP60985 99 aa11.34□□□□□ -0.59
CHD3-211ENST00000481999 PAX8Q06710 450 aa11.34□□□□□ -0.59
CHD3-211ENST00000481999 ECSCRQ19T08 205 aa11.34□□□□□ -0.59
CHD3-211ENST00000481999 HIST2H2BCQ6DN03 193 aa11.34□□□□□ -0.59
CHD3-211ENST00000481999 MRPL52Q86TS9 123 aaKnown RBP11.34□□□□□ -0.59
CHD3-211ENST00000481999 GPR82Q96P67 336 aa11.34□□□□□ -0.59
CHD3-211ENST00000481999 PSMG3-AS1Q96PY0 264 aa11.34□□□□□ -0.59
CHD3-211ENST00000481999 SPOCK3Q9BQ16 436 aa11.34□□□□□ -0.59
CHD3-211ENST00000481999 C7orf69Q9H7B7 122 aa11.34□□□□□ -0.59
CHD3-211ENST00000481999 SONP18583 2426 aaKnown RBP11.33□□□□□ -0.6
CHD3-211ENST00000481999 ITPR2Q14571 2701 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 G3V318 75 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 RAB4AP20338 218 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 NUTF2P61970 127 aaKnown RBP11.33□□□□□ -0.6
CHD3-211ENST00000481999 SLAQ13239 276 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 TDRG1Q3Y452 100 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 C5orf17Q8NAS9 161 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 MIEN1Q9BRT3 115 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 ATG101Q9BSB4 218 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 MRPL27Q9P0M9 148 aaKnown RBP11.33□□□□□ -0.6
CHD3-211ENST00000481999 OR2J3O76001 311 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 FAM106CPP0CH98 169 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 GP9P14770 177 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 PMCHP20382 165 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 EBI3Q14213 229 aa11.33□□□□□ -0.6
CHD3-211ENST00000481999 ATP6V0E1O15342 81 aa11.32□□□□□ -0.6
CHD3-211ENST00000481999 ZNF705AQ6ZN79 300 aaPredicted RBP11.32□□□□□ -0.6
CHD3-211ENST00000481999 ATP5L2Q7Z4Y8 100 aa11.32□□□□□ -0.6
CHD3-211ENST00000481999 FMC1Q96HJ9 113 aa11.32□□□□□ -0.6
CHD3-211ENST00000481999 NEU1Q99519 415 aa11.32□□□□□ -0.6
CHD3-211ENST00000481999 RASL11BQ9BPW5 248 aa11.32□□□□□ -0.6
CHD3-211ENST00000481999 PAM16Q9Y3D7 125 aa11.32□□□□□ -0.6
CHD3-211ENST00000481999 HIGD1CA8MV81 97 aa11.32□□□□□ -0.6
CHD3-211ENST00000481999 DIRC3C9JPN6 131 aa11.32□□□□□ -0.6
CHD3-211ENST00000481999 F8W735 103 aaPredicted RBP11.32□□□□□ -0.6
CHD3-211ENST00000481999 OR4B1Q8NGF8 309 aa11.32□□□□□ -0.6
CHD3-211ENST00000481999 TMUB1Q9BVT8 246 aa11.32□□□□□ -0.6
CHD3-211ENST00000481999 M0QZK8 103 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 NDUFB8O95169 186 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 TOMM40O96008 361 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 LY6EQ16553 131 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 C18orf32Q8TCD1 76 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 MLST8Q9BVC4 326 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 HIGD1AQ9Y241 93 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 RNF114Q9Y508 228 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 IGLV11-55A0A075B6I3 123 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 COX6B1P14854 86 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 HIF1ANQ9NWT6 349 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
CHD3-211ENST00000481999 HECTD1Q9ULT8 2610 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 OR2T8A6NH00 312 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 OOSP1A8MZH6 123 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 CT83Q5H943 113 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 GDF5OSQ5U4N7 250 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 Q8N976 141 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 PIFOQ8TCI5 191 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 Q9H3A6 140 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 ITPR3Q14573 2671 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 PRRC2AP48634 2157 aaKnown RBP11.3□□□□□ -0.6
CHD3-211ENST00000481999 IGHV1-69DA0A0B4J2H0 117 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 TCAPO15273 167 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 LTAP01374 205 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 IGHV1-69P01742 117 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 TCRAP04437 139 aa11.3□□□□□ -0.6
CHD3-211ENST00000481999 KLF5Q13887 457 aaPredicted RBP11.3□□□□□ -0.6
CHD3-211ENST00000481999 Q71RC1 249 aaPredicted RBP11.3□□□□□ -0.6
CHD3-211ENST00000481999 SRSF8Q9BRL6 282 aaKnown RBP11.3□□□□□ -0.6
CHD3-211ENST00000481999 RPP21Q9H633 154 aaKnown RBP11.3□□□□□ -0.6
CHD3-211ENST00000481999 IL4P05112 153 aa11.29□□□□□ -0.6
CHD3-211ENST00000481999 MSMBP08118 114 aa11.29□□□□□ -0.6
CHD3-211ENST00000481999 NIT1Q86X76 327 aa11.29□□□□□ -0.6
CHD3-211ENST00000481999 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
CHD3-211ENST00000481999 TMEM14CQ9P0S9 112 aa11.29□□□□□ -0.6
CHD3-211ENST00000481999 ZNF492Q9P255 531 aa11.29□□□□□ -0.6
CHD3-211ENST00000481999 A0A1B0GXF2 115 aa11.29□□□□□ -0.6
CHD3-211ENST00000481999 A8MWL6 223 aa11.29□□□□□ -0.6
CHD3-211ENST00000481999 BORCS7Q96B45 105 aa11.29□□□□□ -0.6
CHD3-211ENST00000481999 PRSS22Q9GZN4 317 aa11.29□□□□□ -0.6
CHD3-211ENST00000481999 BAHCC1Q9P281 2608 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 NF1P21359 2839 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 P01737 135 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 CAMPP49913 170 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 Q56UQ5 140 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 UNQ5815/PRO19632Q6UWF5 114 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 TMEM190Q8WZ59 177 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 ASCL2Q99929 193 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 SLC25A39Q9BZJ4 359 aaPredicted RBP11.28□□□□□ -0.6
CHD3-211ENST00000481999 OTORQ9NRC9 128 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 NDUFS8O00217 210 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 GNG7O60262 68 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 FAM19A2Q8N3H0 131 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 TTC9CQ8N5M4 171 aa11.28□□□□□ -0.6
CHD3-211ENST00000481999 ALKBH7Q9BT30 221 aaPredicted RBP11.28□□□□□ -0.6
CHD3-211ENST00000481999 C19orf71A6NCJ1 209 aa11.27□□□□□ -0.61
CHD3-211ENST00000481999 NPIPB5A8MRT5 1133 aa11.27□□□□□ -0.61
CHD3-211ENST00000481999 HSBP1O75506 76 aa11.27□□□□□ -0.61
CHD3-211ENST00000481999 HLA-DRB1P01911 266 aa11.27□□□□□ -0.61
CHD3-211ENST00000481999 C3orf79P0CE67 100 aa11.27□□□□□ -0.61
CHD3-211ENST00000481999 NTF3P20783 257 aa11.27□□□□□ -0.61
CHD3-211ENST00000481999 HBBP68871 147 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms