RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 STAG3L2P0CL84 134 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 STAG3L3P0CL85 134 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 GATA2P23769 480 aaPredicted RBP3.75□□□□□ -1.81
HDAC6-223ENST00000480525 RAB5CP51148 216 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 PMS2P11Q13670 270 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 CLINT1Q14677 625 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 HAGHQ16775 308 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 LGALSLQ3ZCW2 172 aaPredicted RBP3.75□□□□□ -1.81
HDAC6-223ENST00000480525 MIC13Q5XKP0 118 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 EIF5AL1Q6IS14 154 aaKnown RBP3.75□□□□□ -1.81
HDAC6-223ENST00000480525 TMEM256Q8N2U0 113 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 IL17DQ8TAD2 202 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 PPP1R14BQ96C90 147 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 RNF183Q96D59 192 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 FAM167A-AS1Q96KT0 104 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 CITED4Q96RK1 184 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 ARPC5LQ9BPX5 153 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 SCRT1Q9BWW7 348 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 MFFQ9GZY8 342 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 CSTL1Q9H114 145 aa3.75□□□□□ -1.81
HDAC6-223ENST00000480525 C11orf68Q9H3H3 251 aaKnown RBP3.75□□□□□ -1.81
HDAC6-223ENST00000480525 IGHV3OR16-8A0A075B7F1 116 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 FXYD6-FXYD2A0A087WZ82 144 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 TEX48A0A1B0GUV7 120 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 RBMY1BA6NDE4 496 aaKnown RBP3.74□□□□□ -1.81
HDAC6-223ENST00000480525 RBMY1EA6NEQ0 496 aaKnown RBP3.74□□□□□ -1.81
HDAC6-223ENST00000480525 ARPC5O15511 151 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 BCL2L11O43521 198 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 NDUFS6O75380 124 aaKnown RBP3.74□□□□□ -1.81
HDAC6-223ENST00000480525 RBMY1DP0C7P1 496 aaKnown RBP3.74□□□□□ -1.81
HDAC6-223ENST00000480525 ATP6V0CP27449 155 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 TSPOP30536 169 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 DEFB131AP59861 70 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 RPL11P62913 178 aaKnown RBP3.74□□□□□ -1.81
HDAC6-223ENST00000480525 PSG3Q16557 428 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 Q5BKY6 102 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 DEFB121Q5J5C9 76 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 FAM78BQ5VT40 261 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 ZNF705AQ6ZN79 300 aaPredicted RBP3.74□□□□□ -1.81
HDAC6-223ENST00000480525 SBSPONQ8IVN8 264 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 STHQ8IWL8 128 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 DEFB125Q8N687 156 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 CSNK1G2-AS1Q8NCQ2 148 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 RXFP4Q8TDU9 374 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 PHYHIPLQ96FC7 376 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 UHRF2Q96PU4 802 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 TXNDC17Q9BRA2 123 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 AAMDCQ9H7C9 122 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 WFDC1Q9HC57 220 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 TMEM167BQ9NRX6 74 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 DOK5Q9P104 306 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 RFNGQ9Y644 331 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 U3KQK5 164 aa3.74□□□□□ -1.81
HDAC6-223ENST00000480525 HUWE1Q7Z6Z7 4374 aaKnown RBP3.74□□□□□ -1.81
HDAC6-223ENST00000480525 DNAH7Q8WXX0 4024 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 IGHV3OR16-13A0A075B7E8 117 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 IGHV3-49A0A0A0MS15 119 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 IGHV3-74A0A0B4J1X5 117 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 TRAV8-2A0A0B4J237 113 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 TRAV1-1A0A0B4J248 108 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 CTXND1A0A1B0GTU2 59 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 A0A1W2PPV4 95 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 KANTRA0A1W2PQU2 76 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 A0A1W2PRE2 83 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 TMEM189A5PLL7 270 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 ZNF705FA8MVS1 300 aaPredicted RBP3.73□□□□□ -1.81
HDAC6-223ENST00000480525 NPIPB6E9PJ23 425 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 CXorf1O96002 111 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 NBEAP1P0C6P0 100 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 ZNF688P0C7X2 276 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 ZNF705DP0CH99 300 aaPredicted RBP3.73□□□□□ -1.81
HDAC6-223ENST00000480525 ZNF705BP0CI00 300 aaPredicted RBP3.73□□□□□ -1.81
HDAC6-223ENST00000480525 TPT1P13693 172 aaKnown RBP3.73□□□□□ -1.81
HDAC6-223ENST00000480525 MIFP14174 115 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 CRISP2P16562 243 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 CDC34P49427 236 aaPredicted RBP3.73□□□□□ -1.81
HDAC6-223ENST00000480525 FHITP49789 147 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 PPT1P50897 306 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 PSMG4Q5JS54 123 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 FFAR4Q5NUL3 377 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 FAM74A1Q5RGS3 127 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 EBLN2Q6P2I7 272 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 AMTNQ6UX39 209 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 C9orf47Q6ZRZ4 202 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 AKAP14Q86UN6 197 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 SLC51BQ86UW2 128 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 APRG1Q8IVJ8 170 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 BAP18Q8IXM2 172 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 RPP25LQ8N5L8 163 aaKnown RBP3.73□□□□□ -1.81
HDAC6-223ENST00000480525 OR10G4Q8NGN3 311 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 OR10G9Q8NGN4 311 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 OR10G7Q8NGN6 311 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 FXYD5Q96DB9 178 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 C16orf92Q96LL3 132 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 WWC2-AS2Q96NR7 200 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 RCHY1Q96PM5 261 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 LINC00467Q9BRT7 94 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 RSG1Q9BU20 258 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 SLC25A2Q9BXI2 301 aa3.73□□□□□ -1.81
HDAC6-223ENST00000480525 OR51M1Q9H341 326 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms