RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 A0A0B4J2C4 111 aa4.48□□□□□ -1.69
USF3-202ENST00000478658 LYZL2Q7Z4W2 148 aa4.48□□□□□ -1.69
USF3-202ENST00000478658 FAM216BQ8N7L0 139 aa4.48□□□□□ -1.69
USF3-202ENST00000478658 RNF138Q8WVD3 245 aa4.48□□□□□ -1.69
USF3-202ENST00000478658 FAM60AQ9NP50 221 aa4.48□□□□□ -1.69
USF3-202ENST00000478658 CSDC2Q9Y534 153 aaKnown RBP4.48□□□□□ -1.69
USF3-202ENST00000478658 DENND4CQ5VZ89 1909 aa4.48□□□□□ -1.69
USF3-202ENST00000478658 MST1P26927 711 aa4.48□□□□□ -1.69
USF3-202ENST00000478658 EFNA4P52798 201 aa4.48□□□□□ -1.69
USF3-202ENST00000478658 RPL18AQ02543 176 aaKnown RBP4.48□□□□□ -1.69
USF3-202ENST00000478658 FXYD7P58549 80 aa4.48□□□□□ -1.69
USF3-202ENST00000478658 ZNF329Q86UD4 541 aa4.48□□□□□ -1.69
USF3-202ENST00000478658 IGHV3-21A0A0B4J1V1 117 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 IGHV5-10-1A0A0J9YXX1 117 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 H0Y9J4 135 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 MPZP25189 248 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 PIGYQ3MUY2 71 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 LAIR2Q6ISS4 152 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 KLF14Q8TD94 323 aaPredicted RBP4.47□□□□□ -1.69
USF3-202ENST00000478658 CSTL1Q9H114 145 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 AURKAIP1Q9NWT8 199 aaPredicted RBP4.47□□□□□ -1.69
USF3-202ENST00000478658 PLXNB3Q9ULL4 1909 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 IL9P15248 144 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 TMEM75Q8N9X5 138 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 LSM4Q9Y4Z0 139 aaKnown RBP4.47□□□□□ -1.69
USF3-202ENST00000478658 TSSC4Q9Y5U2 329 aaPredicted RBP4.47□□□□□ -1.69
USF3-202ENST00000478658 IGKV6D-21A0A0A0MT36 114 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 GAGE12HA6NDE8 117 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 J3QRE1 110 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 TMEM14BQ9NUH8 114 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 TRAV23DV6A0A075B6W5 121 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 C2CD4DB7Z1M9 353 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 NDUFA1O15239 70 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 SIVA1O15304 175 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 FOXF2Q12947 444 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 PSG3Q16557 428 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 C16orf54Q6UWD8 224 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 SPTAN1Q13813 2472 aaKnown RBP4.47□□□□□ -1.69
USF3-202ENST00000478658 MSGN1A6NI15 193 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 EFNB3Q15768 340 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 PRO1854Q9UHT4 67 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 PSG8Q9UQ74 426 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 TCRBV5S1A1TA0A578 114 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 SRRM4A7MD48 611 aaKnown RBP4.47□□□□□ -1.69
USF3-202ENST00000478658 PYY3Q5JQD4 70 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 SP5Q6BEB4 398 aaPredicted RBP4.47□□□□□ -1.69
USF3-202ENST00000478658 LYL1P12980 280 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 CCL4P13236 92 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 TGIF1Q15583 401 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 LCTP09848 1927 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 PTPRDP23468 1912 aa4.47□□□□□ -1.69
USF3-202ENST00000478658 GREB1LQ9C091 1923 aaPredicted RBP4.46□□□□□ -1.69
USF3-202ENST00000478658 TRBV10-2A0A0K0K1G8 114 aa4.46□□□□□ -1.69
USF3-202ENST00000478658 DLEU1O43261 78 aa4.46□□□□□ -1.69
USF3-202ENST00000478658 ZNRF2Q8NHG8 242 aa4.46□□□□□ -1.69
USF3-202ENST00000478658 ST6GALNAC6Q969X2 333 aa4.46□□□□□ -1.69
USF3-202ENST00000478658 C16orf74Q96GX8 76 aa4.46□□□□□ -1.69
USF3-202ENST00000478658 HCFC1P51610 2035 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 IGKV2D-24A0A075B6R9 120 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 CENPVL3A0A0U1RRI6 287 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 SIGLEC8Q9NYZ4 499 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 C2orf16Q68DN1 1984 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 IGHV1-45A0A0A0MS14 117 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 KLHDC3Q9BQ90 382 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 DEPPQ9NTK1 212 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 KCNE3Q9Y6H6 103 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 TNCP24821 2201 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 OBSL1O75147 1896 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 A0A1B0GTL3 188 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.46□□□□□ -1.7
USF3-202ENST00000478658 C15orf62A8K5M9 175 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 ANGP03950 147 aaKnown RBP4.46□□□□□ -1.7
USF3-202ENST00000478658 DMKNQ6E0U4 476 aaPredicted RBP4.46□□□□□ -1.7
USF3-202ENST00000478658 FAAP20Q6NZ36 180 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 PIP4P2Q8N4L2 257 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 ZNF492Q9P255 531 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 SIGLEC9Q9Y336 463 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 FNDC1Q4ZHG4 1894 aaPredicted RBP4.46□□□□□ -1.7
USF3-202ENST00000478658 C17orf100A8MU93 164 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 TDRG1Q3Y452 100 aa4.46□□□□□ -1.7
USF3-202ENST00000478658 SPART-AS1P0CW21 52 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 GATA4P43694 442 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 DEFB103AP81534 67 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 SLC25A45Q8N413 288 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 HIST1H2BLQ99880 126 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 U3KQE9 123 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 PLXNA4Q9HCM2 1894 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 TRAV13-1A0A0B4J241 112 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 IGHV1OR15-9A0A0B4J2B8 117 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 RPL35AP18077 110 aaKnown RBP4.45□□□□□ -1.7
USF3-202ENST00000478658 OTX1P32242 354 aaPredicted RBP4.45□□□□□ -1.7
USF3-202ENST00000478658 C20orf78Q9BR46 151 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 UPK3AO75631 287 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 BSPH1Q075Z2 132 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 ATP6V0E2Q8NHE4 81 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 AJUBAQ96IF1 538 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 LINC01548A6NM66 108 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 MRPS36P82909 103 aaKnown RBP4.45□□□□□ -1.7
USF3-202ENST00000478658 MST1LQ2TV78 715 aa4.45□□□□□ -1.7
USF3-202ENST00000478658 C3orf36Q3SXR2 165 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms