RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 PEX7O00628 323 aa11.01□□□□□ -0.65
COL4A6-206ENST00000477085 IGFL4Q6B9Z1 124 aa11.01□□□□□ -0.65
COL4A6-206ENST00000477085 GLMPQ8WWB7 406 aa11.01□□□□□ -0.65
COL4A6-206ENST00000477085 OTORQ9NRC9 128 aa11.01□□□□□ -0.65
COL4A6-206ENST00000477085 TRAV34A0A0B4J273 112 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 HELTA6NFD8 242 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 SLC25A5P05141 298 aaKnown RBP11□□□□□ -0.65
COL4A6-206ENST00000477085 CD28P10747 220 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 LINC01551Q86U37 167 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 C11orf44Q8N8P7 122 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 RNF24Q9Y225 148 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 SELENOKQ9Y6D0 94 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 A0A087X0K7 114 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 NDUFA7O95182 113 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 ATF4P18848 351 aaPredicted RBP11□□□□□ -0.65
COL4A6-206ENST00000477085 HLA-DMBP28068 263 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 HOXD3P31249 432 aaPredicted RBP11□□□□□ -0.65
COL4A6-206ENST00000477085 PDE6HQ13956 83 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 RHEBQ15382 184 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 RPEL1Q2QD12 228 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 FAM106AQ4KMX7 169 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 OCC1Q8TAD7 63 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 DUX3Q96PT4 197 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 JMJD8Q96S16 334 aa11□□□□□ -0.65
COL4A6-206ENST00000477085 IGHV7-4-1A0A0J9YVY3 117 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 TMEM213A2RRL7 107 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 K7EMT4 169 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 K7EN84 100 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 M0R3E3 92 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 ISLRO14498 428 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 IGLV2-8P01709 118 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 TCRAP04437 139 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 S100A7P31151 101 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 PNRC1Q12796 327 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-206ENST00000477085 ADIRFQ15847 76 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 LYPD1Q8N2G4 141 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 C5orf17Q8NAS9 161 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 C4orf3Q8WVX3 66 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 HIST1H2BAQ96A08 127 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 SGK494Q96LW2 274 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 IGF2BP2-AS1Q96M15 143 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 DAZ1Q9NQZ3 744 aaKnown RBP10.99□□□□□ -0.65
COL4A6-206ENST00000477085 SMPXQ9UHP9 88 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 RPH3ALQ9UNE2 315 aa10.99□□□□□ -0.65
COL4A6-206ENST00000477085 ZNF785A8K8V0 405 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 C9JCJ5 164 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 HAX1O00165 279 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 CHEK1O14757 476 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 TCF21O43680 179 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 SYNJ2BPP57105 145 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 CENPWQ5EE01 88 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 GPR82Q96P67 336 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 TCEAL7Q9BRU2 100 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 RHPN1-AS1Q9BWJ2 59 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 ZNF331Q9NQX6 463 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-206ENST00000477085 KLF12Q9Y4X4 402 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 TRAV8-2A0A0B4J237 113 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 IGLV2-11P01706 119 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 SLURP1P55000 103 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 PROK1P58294 105 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 KLF5Q13887 457 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-206ENST00000477085 ATG101Q9BSB4 218 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 SMCO4Q9NRQ5 59 aa10.98□□□□□ -0.65
COL4A6-206ENST00000477085 GALR1P47211 349 aa10.97□□□□□ -0.65
COL4A6-206ENST00000477085 TMEM183BQ1AE95 376 aa10.97□□□□□ -0.65
COL4A6-206ENST00000477085 RNF212Q495C1 297 aa10.97□□□□□ -0.65
COL4A6-206ENST00000477085 KHDC1LQ5JSQ8 128 aa10.97□□□□□ -0.65
COL4A6-206ENST00000477085 C8orf86Q6ZUL3 223 aa10.97□□□□□ -0.65
COL4A6-206ENST00000477085 REC114Q7Z4M0 266 aa10.97□□□□□ -0.65
COL4A6-206ENST00000477085 KLHL30-AS1Q8NEE0 82 aa10.97□□□□□ -0.65
COL4A6-206ENST00000477085 OR11H1Q8NG94 326 aa10.97□□□□□ -0.65
COL4A6-206ENST00000477085 ISOC2Q96AB3 205 aa10.97□□□□□ -0.65
COL4A6-206ENST00000477085 CITED2Q99967 270 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-206ENST00000477085 RNF114Q9Y508 228 aa10.97□□□□□ -0.65
COL4A6-206ENST00000477085 TRAV8-1A0A0A6YYK1 113 aa10.96□□□□□ -0.65
COL4A6-206ENST00000477085 ZNF705FA8MVS1 300 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-206ENST00000477085 B4DEV8 164 aa10.96□□□□□ -0.65
COL4A6-206ENST00000477085 LGALS9O00182 355 aa10.96□□□□□ -0.65
COL4A6-206ENST00000477085 ZNF253O75346 499 aa10.96□□□□□ -0.65
COL4A6-206ENST00000477085 KRTAP10-3P60369 221 aa10.96□□□□□ -0.65
COL4A6-206ENST00000477085 PSG9Q00887 426 aa10.96□□□□□ -0.65
COL4A6-206ENST00000477085 ADAMTSL5Q6ZMM2 481 aa10.96□□□□□ -0.65
COL4A6-206ENST00000477085 OR1N2Q8NGR9 330 aa10.96□□□□□ -0.65
COL4A6-206ENST00000477085 UFC1Q9Y3C8 167 aa10.96□□□□□ -0.65
COL4A6-206ENST00000477085 F8P00451 2351 aa10.96□□□□□ -0.66
COL4A6-206ENST00000477085 NIPBLQ6KC79 2804 aaeCLIP10.95□□□□□ -0.66
COL4A6-206ENST00000477085 A0A087WWC5 75 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 A8MWP6 167 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 DIRC3C9JPN6 131 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 LINC01619G3V211 115 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 GNG4P50150 75 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 CNN1P51911 297 aaKnown RBP10.95□□□□□ -0.66
COL4A6-206ENST00000477085 TAS2R60P59551 318 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 OR5I1Q13606 314 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 GOLT1AQ6ZVE7 132 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 NHLRC2Q8NBF2 726 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 A0A1W2PRX2 142 aa10.95□□□□□ -0.66
COL4A6-206ENST00000477085 C1QL4Q86Z23 238 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms