RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 OR5B12Q96R08 314 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 CTDSP1Q9GZU7 261 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 AAMDCQ9H7C9 122 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 TUBA4BQ9H853 241 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 DAZ1Q9NQZ3 744 aaKnown RBP7.19□□□□□ -1.26
VPS52-216ENST00000471309 TMEM242Q9NWH2 141 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 SMAD5-AS1Q9Y6J3 95 aa7.19□□□□□ -1.26
VPS52-216ENST00000471309 F8P00451 2351 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 CXorf65A6NEN9 183 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 A8MWP6 167 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 K7EMT4 169 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 ZNF207O43670 478 aaKnown RBP7.18□□□□□ -1.26
VPS52-216ENST00000471309 NDUFA7O95182 113 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 APOHP02749 345 aaPredicted RBP7.18□□□□□ -1.26
VPS52-216ENST00000471309 MT-ND4LP03901 98 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 S100A9P06702 114 aaKnown RBP7.18□□□□□ -1.26
VPS52-216ENST00000471309 CDX1P47902 265 aaPredicted RBP7.18□□□□□ -1.26
VPS52-216ENST00000471309 GNG5P63218 68 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 TMEM183BQ1AE95 376 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 RPEL1Q2QD12 228 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 FAM106AQ4KMX7 169 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 C16orf54Q6UWD8 224 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 REC114Q7Z4M0 266 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 EXOC3-AS1Q8N2X6 119 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 CMTM2Q8TAZ6 248 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 C4orf3Q8WVX3 66 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 WFDC12Q8WWY7 111 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 ISOC2Q96AB3 205 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 SMIM12Q96EX1 92 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 FMC1Q96HJ9 113 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 UFC1Q9Y3C8 167 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 KLF12Q9Y4X4 402 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 OTOGQ6ZRI0 2925 aa7.18□□□□□ -1.26
VPS52-216ENST00000471309 CELSR1Q9NYQ6 3014 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 IGHV7-4-1A0A0J9YVY3 117 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 TRBV6-1A0A0K0K1D8 114 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 SERTM2A0A1B0GWG4 89 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 A0A1W2PS18 150 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 PGPEP1LA6NFU8 196 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 INAFM1C9JVW0 142 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 LGALS9O00182 355 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 ISLRO14498 428 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 UBE2G1P62253 170 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 RNF212Q495C1 297 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 TCTEX1D4Q5JR98 221 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 C15orf54Q8N8G6 183 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.17□□□□□ -1.26
VPS52-216ENST00000471309 ANAPC16Q96DE5 110 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 SLC50A1Q9BRV3 221 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 ZNF331Q9NQX6 463 aaPredicted RBP7.17□□□□□ -1.26
VPS52-216ENST00000471309 RPH3ALQ9UNE2 315 aa7.17□□□□□ -1.26
VPS52-216ENST00000471309 ZFHX3Q15911 3703 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 IGHV4OR15-8A0A075B7B6 117 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 A0A087WW49 117 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 IGHV3-49A0A0A0MS15 119 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 IGHV3-66A0A0C4DH42 116 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 ZNF320A2RRD8 509 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 ZNF785A8K8V0 405 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 K7EN84 100 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 K7EQM0 130 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 PPP1R2P9O14990 202 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 IGLV2-8P01709 118 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 BMI1P35226 326 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 Q86TA4 180 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 C1QL4Q86Z23 238 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 TMEM75Q8N9X5 138 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 LINC01006Q8NI28 216 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 OCC1Q8TAD7 63 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 LINC00479Q96M42 142 aa7.16□□□□□ -1.26
VPS52-216ENST00000471309 MAP1AP78559 2803 aaPredicted RBP7.15□□□□□ -1.26
VPS52-216ENST00000471309 IGHV3OR16-13A0A075B7E8 117 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 IGHV3-74A0A0B4J1X5 117 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 TMEM213A2RRL7 107 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 FBLL1A6NHQ2 334 aaKnown RBP7.15□□□□□ -1.26
VPS52-216ENST00000471309 DIRC3C9JPN6 131 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 H7BYZ3 331 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 TCF21O43680 179 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 LTAP01374 205 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 IGLV2-11P01706 119 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 HOXD3P31249 432 aaPredicted RBP7.15□□□□□ -1.26
VPS52-216ENST00000471309 CSN1S1P47710 185 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 C8orf86Q6ZUL3 223 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 GOLT1AQ6ZVE7 132 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 Q71RC1 249 aaPredicted RBP7.15□□□□□ -1.26
VPS52-216ENST00000471309 MRPL53Q96EL3 112 aaKnown RBP7.15□□□□□ -1.26
VPS52-216ENST00000471309 SFRP2Q96HF1 295 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 YPEL4Q96NS1 127 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 RHPN1-AS1Q9BWJ2 59 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 AURKAIP1Q9NWT8 199 aaPredicted RBP7.15□□□□□ -1.26
VPS52-216ENST00000471309 CLEC5AQ9NY25 188 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 SMPXQ9UHP9 88 aa7.15□□□□□ -1.26
VPS52-216ENST00000471309 ANK3Q12955 4377 aaKnown RBP7.15□□□□□ -1.27
VPS52-216ENST00000471309 TRAV34A0A0B4J273 112 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 COLCA2A8K830 154 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 LINC01619G3V211 115 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 M0R3E3 92 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 CHEK1O14757 476 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 CRLF1O75462 422 aa7.14□□□□□ -1.27
VPS52-216ENST00000471309 GCGP01275 180 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms