RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 BCAP31P51572 246 aa9.08□□□□□ -0.96
PTPN7-207ENST00000468385 TAS2R60P59551 318 aa9.08□□□□□ -0.96
PTPN7-207ENST00000468385 SRPXP78539 464 aa9.08□□□□□ -0.96
PTPN7-207ENST00000468385 FGL1Q08830 312 aa9.08□□□□□ -0.96
PTPN7-207ENST00000468385 ZNF738Q8NE65 137 aa9.08□□□□□ -0.96
PTPN7-207ENST00000468385 BPIFCQ8NFQ6 507 aa9.08□□□□□ -0.96
PTPN7-207ENST00000468385 C16orf74Q96GX8 76 aa9.08□□□□□ -0.96
PTPN7-207ENST00000468385 TMEM147Q9BVK8 224 aa9.08□□□□□ -0.96
PTPN7-207ENST00000468385 SCP2D1Q9UJQ7 156 aa9.08□□□□□ -0.96
PTPN7-207ENST00000468385 DUXBA0A1W2PPF3 345 aa9.07□□□□□ -0.96
PTPN7-207ENST00000468385 H3BRN7 92 aa9.07□□□□□ -0.96
PTPN7-207ENST00000468385 BTF3P20290 206 aaKnown RBP9.07□□□□□ -0.96
PTPN7-207ENST00000468385 HIST1H1AQ02539 215 aaPredicted RBP9.07□□□□□ -0.96
PTPN7-207ENST00000468385 MZT2BQ6NZ67 158 aa9.07□□□□□ -0.96
PTPN7-207ENST00000468385 TMEM256Q8N2U0 113 aa9.07□□□□□ -0.96
PTPN7-207ENST00000468385 OR8A1Q8NGG7 326 aa9.07□□□□□ -0.96
PTPN7-207ENST00000468385 RNASE8Q8TDE3 154 aaKnown RBP9.07□□□□□ -0.96
PTPN7-207ENST00000468385 UHRF2Q96PU4 802 aa9.07□□□□□ -0.96
PTPN7-207ENST00000468385 Q9H3A6 140 aa9.07□□□□□ -0.96
PTPN7-207ENST00000468385 TIMM8BQ9Y5J9 83 aaPredicted RBP9.07□□□□□ -0.96
PTPN7-207ENST00000468385 VPS13BQ7Z7G8 4022 aa9.06□□□□□ -0.96
PTPN7-207ENST00000468385 PRB4P10163 310 aaPredicted RBP9.06□□□□□ -0.96
PTPN7-207ENST00000468385 HTN1P15515 57 aa9.06□□□□□ -0.96
PTPN7-207ENST00000468385 CXCL3P19876 107 aa9.06□□□□□ -0.96
PTPN7-207ENST00000468385 RHOBP62745 196 aa9.06□□□□□ -0.96
PTPN7-207ENST00000468385 ASAH1Q13510 395 aa9.06□□□□□ -0.96
PTPN7-207ENST00000468385 TTC32Q5I0X7 151 aa9.06□□□□□ -0.96
PTPN7-207ENST00000468385 TMEM144Q7Z5S9 345 aa9.06□□□□□ -0.96
PTPN7-207ENST00000468385 UPK3BQ9BT76 320 aa9.06□□□□□ -0.96
PTPN7-207ENST00000468385 NOP10Q9NPE3 64 aaKnown RBP9.06□□□□□ -0.96
PTPN7-207ENST00000468385 MCUBQ9NWR8 336 aa9.06□□□□□ -0.96
PTPN7-207ENST00000468385 TRAV26-1A0A087WT03 109 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 A0A1W2PPQ1 181 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 SLC25A6P12236 298 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 S100A7P31151 101 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 RPP30P78346 268 aaKnown RBP9.05□□□□□ -0.96
PTPN7-207ENST00000468385 AKR1C1Q04828 323 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 OR5I1Q13606 314 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 ZNF493Q6ZR52 646 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 LINC00612Q8N6U2 182 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 LRTM2Q8N967 370 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 RXFP4Q8TDU9 374 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 TMEM263Q8WUH6 116 aaKnown RBP9.05□□□□□ -0.96
PTPN7-207ENST00000468385 GNPNAT1Q96EK6 184 aaPredicted RBP9.05□□□□□ -0.96
PTPN7-207ENST00000468385 ZNF503Q96F45 646 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 CIB3Q96Q77 187 aaPredicted RBP9.05□□□□□ -0.96
PTPN7-207ENST00000468385 SHANK2-AS3Q9BTD1 123 aa9.05□□□□□ -0.96
PTPN7-207ENST00000468385 A0A087X0K7 114 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 PIGBOS1A0A0B4J2F0 54 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 WRBO00258 174 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 SYNGR2O43760 224 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 MED6O75586 246 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 RPL7P18124 248 aaKnown RBP9.04□□□□□ -0.96
PTPN7-207ENST00000468385 M6PRP20645 277 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 HOXA5P20719 270 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 CDKN1BP46527 198 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 PSG3Q16557 428 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 ESRGQ1W209 222 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 CYP2G1PQ6ZSU1 146 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 ACOT7LQ6ZUV0 252 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 NRARPQ7Z6K4 114 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 OR10J6PQ8NGY7 276 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 ENKURQ8TC29 256 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 PPP1R14DQ9NXH3 145 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 HIGD1AQ9Y241 93 aa9.04□□□□□ -0.96
PTPN7-207ENST00000468385 A0A0J9YY99 117 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 CENPXA8MT69 81 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 H3BP45 60 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 H7BYZ3 331 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 PLA2G10O15496 165 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 PLP1P60201 277 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 RAP2BP61225 183 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 DLK1P80370 383 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 KIR3DS1Q14943 382 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 TMEM128Q5BJH2 165 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 SPANXN5Q5MJ07 72 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 TMED4Q7Z7H5 227 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 MRPS16Q9Y3D3 137 aaKnown RBP9.03□□□□□ -0.96
PTPN7-207ENST00000468385 MYCBP2O75592 4640 aa9.03□□□□□ -0.96
PTPN7-207ENST00000468385 FAM240BA0A1B0GVZ2 78 aa9.02□□□□□ -0.97
PTPN7-207ENST00000468385 EPM2AB3EWF7 344 aa9.02□□□□□ -0.97
PTPN7-207ENST00000468385 MRPS12O15235 138 aaKnown RBP9.02□□□□□ -0.97
PTPN7-207ENST00000468385 LYRM1O43325 122 aa9.02□□□□□ -0.97
PTPN7-207ENST00000468385 HYPMO75409 117 aa9.02□□□□□ -0.97
PTPN7-207ENST00000468385 IL5P05113 134 aa9.02□□□□□ -0.97
PTPN7-207ENST00000468385 TOMM5Q8N4H5 51 aa9.02□□□□□ -0.97
PTPN7-207ENST00000468385 RPUSD4Q96CM3 377 aaKnown RBP9.02□□□□□ -0.97
PTPN7-207ENST00000468385 ZNF586Q9NXT0 402 aa9.02□□□□□ -0.97
PTPN7-207ENST00000468385 PMS2P5A8MQ11 134 aa9.01□□□□□ -0.97
PTPN7-207ENST00000468385 LINC00869P0C866 280 aa9.01□□□□□ -0.97
PTPN7-207ENST00000468385 Q6ZRN7 208 aaPredicted RBP9.01□□□□□ -0.97
PTPN7-207ENST00000468385 LRRC20Q8TCA0 184 aa9.01□□□□□ -0.97
PTPN7-207ENST00000468385 C20orf144Q9BQM9 153 aa9.01□□□□□ -0.97
PTPN7-207ENST00000468385 PARD6GQ9BYG4 376 aaPredicted RBP9.01□□□□□ -0.97
PTPN7-207ENST00000468385 STRAPQ9Y3F4 350 aaKnown RBP9.01□□□□□ -0.97
PTPN7-207ENST00000468385 GAGE12BA1L429 117 aa9□□□□□ -0.97
PTPN7-207ENST00000468385 SMCO3A2RU48 225 aa9□□□□□ -0.97
PTPN7-207ENST00000468385 H3BNG1 76 aa9□□□□□ -0.97
PTPN7-207ENST00000468385 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
PTPN7-207ENST00000468385 ADAP1O75689 374 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms