RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 TM2D3Q9BRN9 247 aa12.52□□□□□ -0.41
USP39-211ENST00000465282 ZMAT4Q9H898 229 aa12.52□□□□□ -0.41
USP39-211ENST00000465282 CYTL1Q9NRR1 136 aa12.52□□□□□ -0.41
USP39-211ENST00000465282 AGRNO00468 2067 aa12.52□□□□□ -0.41
USP39-211ENST00000465282 A0A1W2PPV4 95 aa12.51□□□□□ -0.41
USP39-211ENST00000465282 EIF5AP63241 154 aaKnown RBP12.51□□□□□ -0.41
USP39-211ENST00000465282 PDE6HQ13956 83 aa12.51□□□□□ -0.41
USP39-211ENST00000465282 ZNF124Q15973 351 aa12.51□□□□□ -0.41
USP39-211ENST00000465282 FOXI2Q6ZQN5 318 aa12.51□□□□□ -0.41
USP39-211ENST00000465282 MIR17HGQ75NE6 70 aa12.51□□□□□ -0.41
USP39-211ENST00000465282 FAM167A-AS1Q96KT0 104 aa12.51□□□□□ -0.41
USP39-211ENST00000465282 CLUHP3Q96NS8 147 aa12.51□□□□□ -0.41
USP39-211ENST00000465282 ASCL2Q99929 193 aa12.51□□□□□ -0.41
USP39-211ENST00000465282 ZNF331Q9NQX6 463 aaPredicted RBP12.51□□□□□ -0.41
USP39-211ENST00000465282 KHDC3LQ587J8 217 aa12.5□□□□□ -0.41
USP39-211ENST00000465282 ACTL10Q5JWF8 245 aa12.5□□□□□ -0.41
USP39-211ENST00000465282 OR10G4Q8NGN3 311 aa12.5□□□□□ -0.41
USP39-211ENST00000465282 OR10G9Q8NGN4 311 aa12.5□□□□□ -0.41
USP39-211ENST00000465282 OR10G7Q8NGN6 311 aa12.5□□□□□ -0.41
USP39-211ENST00000465282 SAT2Q96F10 170 aaPredicted RBP12.5□□□□□ -0.41
USP39-211ENST00000465282 SPATA25Q9BR10 227 aa12.5□□□□□ -0.41
USP39-211ENST00000465282 SLC25A2Q9BXI2 301 aa12.5□□□□□ -0.41
USP39-211ENST00000465282 CSTL1Q9H114 145 aa12.5□□□□□ -0.41
USP39-211ENST00000465282 OR51M1Q9H341 326 aa12.5□□□□□ -0.41
USP39-211ENST00000465282 SAV1Q9H4B6 383 aaPredicted RBP12.5□□□□□ -0.41
USP39-211ENST00000465282 NBEAL2Q6ZNJ1 2754 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 TRAV8-2A0A0B4J237 113 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 H3BQ15 152 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 BCL2L11O43521 198 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 SPP1P10451 314 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 HLA-DRB4P13762 266 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 PSG9Q00887 426 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 TMEM41BQ5BJD5 291 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 EBLN2Q6P2I7 272 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 MORN3Q6PF18 240 aaPredicted RBP12.49□□□□□ -0.41
USP39-211ENST00000465282 Q6ZWC4 215 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 TRPT1Q86TN4 253 aaKnown RBP12.49□□□□□ -0.41
USP39-211ENST00000465282 PAXXQ9BUH6 204 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 SH3BGRL3Q9H299 93 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 ZNF586Q9NXT0 402 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 RFNGQ9Y644 331 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 HLA-DRB4X5D2U9 266 aa12.49□□□□□ -0.41
USP39-211ENST00000465282 TRBV19A0A075B6N1 114 aa12.48□□□□□ -0.41
USP39-211ENST00000465282 A0A1B0GVG6 124 aa12.48□□□□□ -0.41
USP39-211ENST00000465282 H3BMM0 161 aa12.48□□□□□ -0.41
USP39-211ENST00000465282 PFDN1O60925 122 aa12.48□□□□□ -0.41
USP39-211ENST00000465282 RPL35AP18077 110 aaKnown RBP12.48□□□□□ -0.41
USP39-211ENST00000465282 RAB2AP61019 212 aa12.48□□□□□ -0.41
USP39-211ENST00000465282 NUTF2P61970 127 aaKnown RBP12.48□□□□□ -0.41
USP39-211ENST00000465282 PSG3Q16557 428 aa12.48□□□□□ -0.41
USP39-211ENST00000465282 PQLC2Q6ZP29 291 aa12.48□□□□□ -0.41
USP39-211ENST00000465282 TMUB2Q71RG4 321 aa12.48□□□□□ -0.41
USP39-211ENST00000465282 KNCNA6PVL3 124 aa12.47□□□□□ -0.41
USP39-211ENST00000465282 OR7C2O60412 319 aa12.47□□□□□ -0.41
USP39-211ENST00000465282 NBEAP1P0C6P0 100 aa12.47□□□□□ -0.41
USP39-211ENST00000465282 PYYP10082 97 aa12.47□□□□□ -0.41
USP39-211ENST00000465282 CDC34P49427 236 aaPredicted RBP12.47□□□□□ -0.41
USP39-211ENST00000465282 RPP25LQ8N5L8 163 aaKnown RBP12.47□□□□□ -0.41
USP39-211ENST00000465282 RNF141Q8WVD5 230 aa12.47□□□□□ -0.41
USP39-211ENST00000465282 C20orf173Q96LM9 149 aa12.47□□□□□ -0.41
USP39-211ENST00000465282 PRELID1Q9Y255 219 aa12.47□□□□□ -0.41
USP39-211ENST00000465282 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
USP39-211ENST00000465282 A0A0J9YX75 114 aa12.46□□□□□ -0.41
USP39-211ENST00000465282 DUSP14O95147 198 aaKnown RBP12.46□□□□□ -0.41
USP39-211ENST00000465282 SEC11BP0C7V7 166 aa12.46□□□□□ -0.41
USP39-211ENST00000465282 C4BPBP20851 252 aa12.46□□□□□ -0.41
USP39-211ENST00000465282 LGALSLQ3ZCW2 172 aaPredicted RBP12.46□□□□□ -0.41
USP39-211ENST00000465282 AKR1C8PQ5T2L2 129 aa12.46□□□□□ -0.41
USP39-211ENST00000465282 FAM122CQ6P4D5 195 aa12.46□□□□□ -0.41
USP39-211ENST00000465282 ZNF738Q8NE65 137 aa12.46□□□□□ -0.41
USP39-211ENST00000465282 FXYD5Q96DB9 178 aa12.46□□□□□ -0.41
USP39-211ENST00000465282 MRPL53Q96EL3 112 aaKnown RBP12.46□□□□□ -0.41
USP39-211ENST00000465282 ZNF471Q9BX82 626 aaPredicted RBP12.46□□□□□ -0.41
USP39-211ENST00000465282 ACTR3CQ9C0K3 210 aaPredicted RBP12.46□□□□□ -0.41
USP39-211ENST00000465282 SLC17A3O00476 420 aa12.45□□□□□ -0.42
USP39-211ENST00000465282 ZFP69Q49AA0 526 aa12.45□□□□□ -0.42
USP39-211ENST00000465282 LYPD1Q8N2G4 141 aa12.45□□□□□ -0.42
USP39-211ENST00000465282 RNF182Q8N6D2 247 aa12.45□□□□□ -0.42
USP39-211ENST00000465282 C1QTNF4Q9BXJ3 329 aa12.45□□□□□ -0.42
USP39-211ENST00000465282 AAMDCQ9H7C9 122 aa12.45□□□□□ -0.42
USP39-211ENST00000465282 U3KQK5 164 aa12.45□□□□□ -0.42
USP39-211ENST00000465282 A8MTW9 85 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 UMAD1C9J7I0 102 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 NDUFB4O95168 129 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 SNRPCP09234 159 aaKnown RBP12.44□□□□□ -0.42
USP39-211ENST00000465282 STAG3L2P0CL84 134 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 STAG3L3P0CL85 134 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 TPT1P13693 172 aaKnown RBP12.44□□□□□ -0.42
USP39-211ENST00000465282 UBE2L3P68036 154 aaKnown RBP12.44□□□□□ -0.42
USP39-211ENST00000465282 GDF5OSQ5U4N7 250 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 IGFL4Q6B9Z1 124 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 BAP18Q8IXM2 172 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 STOML3Q8TAV4 291 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 BLNKQ8WV28 456 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 RAB24Q969Q5 203 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 RPUSD4Q96CM3 377 aaKnown RBP12.44□□□□□ -0.42
USP39-211ENST00000465282 ZNF503Q96F45 646 aa12.44□□□□□ -0.42
USP39-211ENST00000465282 H3BTX0 84 aa12.43□□□□□ -0.42
USP39-211ENST00000465282 OR10J4P0C629 311 aa12.43□□□□□ -0.42
USP39-211ENST00000465282 EIF5AL1Q6IS14 154 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms