RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 PFDN1O60925 122 aa9.29□□□□□ -0.92
HDAC4-207ENST00000461113 LY6G6CO95867 125 aa9.29□□□□□ -0.92
HDAC4-207ENST00000461113 C4BPBP20851 252 aa9.29□□□□□ -0.92
HDAC4-207ENST00000461113 SERF2P84101 59 aa9.29□□□□□ -0.92
HDAC4-207ENST00000461113 ZNF345Q14585 488 aa9.29□□□□□ -0.92
HDAC4-207ENST00000461113 GUK1Q16774 197 aa9.29□□□□□ -0.92
HDAC4-207ENST00000461113 ODF3L2Q3SX64 289 aa9.29□□□□□ -0.92
HDAC4-207ENST00000461113 APRG1Q8IVJ8 170 aa9.29□□□□□ -0.92
HDAC4-207ENST00000461113 IL17DQ8TAD2 202 aa9.29□□□□□ -0.92
HDAC4-207ENST00000461113 ARPC5LQ9BPX5 153 aa9.29□□□□□ -0.92
HDAC4-207ENST00000461113 CXCL2P19875 107 aa9.28□□□□□ -0.92
HDAC4-207ENST00000461113 M6PRP20645 277 aa9.28□□□□□ -0.92
HDAC4-207ENST00000461113 EBLN2Q6P2I7 272 aa9.28□□□□□ -0.92
HDAC4-207ENST00000461113 LCN15Q6UWW0 184 aa9.28□□□□□ -0.92
HDAC4-207ENST00000461113 KCNRGQ8N5I3 272 aa9.28□□□□□ -0.92
HDAC4-207ENST00000461113 SPATA25Q9BR10 227 aa9.28□□□□□ -0.92
HDAC4-207ENST00000461113 SLC50A1Q9BRV3 221 aa9.28□□□□□ -0.92
HDAC4-207ENST00000461113 PSMG3Q9BT73 122 aaPredicted RBP9.28□□□□□ -0.92
HDAC4-207ENST00000461113 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
HDAC4-207ENST00000461113 RPRMQ9NS64 109 aa9.28□□□□□ -0.92
HDAC4-207ENST00000461113 CLEC5AQ9NY25 188 aa9.28□□□□□ -0.92
HDAC4-207ENST00000461113 FUT9Q9Y231 359 aa9.28□□□□□ -0.92
HDAC4-207ENST00000461113 A0A087X0K7 114 aa9.27□□□□□ -0.93
HDAC4-207ENST00000461113 G3V3Q6 166 aa9.27□□□□□ -0.93
HDAC4-207ENST00000461113 UBE2CO00762 179 aa9.27□□□□□ -0.93
HDAC4-207ENST00000461113 RPL35AP18077 110 aaKnown RBP9.27□□□□□ -0.93
HDAC4-207ENST00000461113 ATP6V0CP27449 155 aa9.27□□□□□ -0.93
HDAC4-207ENST00000461113 ACTL10Q5JWF8 245 aa9.27□□□□□ -0.93
HDAC4-207ENST00000461113 SPATA31B1PQ5VZV4 182 aa9.27□□□□□ -0.93
HDAC4-207ENST00000461113 RPL7L1Q6DKI1 246 aaKnown RBP9.27□□□□□ -0.93
HDAC4-207ENST00000461113 ST6GAL2Q96JF0 529 aa9.27□□□□□ -0.93
HDAC4-207ENST00000461113 HYLS1Q96M11 299 aa9.27□□□□□ -0.93
HDAC4-207ENST00000461113 HRH4Q9H3N8 390 aa9.27□□□□□ -0.93
HDAC4-207ENST00000461113 TMEM14CQ9P0S9 112 aa9.27□□□□□ -0.93
HDAC4-207ENST00000461113 ABCA13Q86UQ4 5058 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 TRAV5A0A0B4J249 113 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 KIR2DL5BA0A0G2JN68 375 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 KIR2DL5BA0A0G2JPC4 375 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 OR7C2O60412 319 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 HIST1H1EP10412 219 aaKnown RBP9.26□□□□□ -0.93
HDAC4-207ENST00000461113 NUTF2P61970 127 aaKnown RBP9.26□□□□□ -0.93
HDAC4-207ENST00000461113 KHDC3LQ587J8 217 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 GCSAMLQ5JQS6 135 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 AKR1C8PQ5T2L2 129 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 KIR2DL5AQ8N109 375 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 FAM24BQ8N5W8 94 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 OR10G4Q8NGN3 311 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 OR10G9Q8NGN4 311 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 OR10G7Q8NGN6 311 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 OR2G3Q8NGZ4 309 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 KIR2DL5BQ8NHK3 375 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 PAXXQ9BUH6 204 aa9.26□□□□□ -0.93
HDAC4-207ENST00000461113 C1QBP02746 253 aa9.25□□□□□ -0.93
HDAC4-207ENST00000461113 SPP1P10451 314 aa9.25□□□□□ -0.93
HDAC4-207ENST00000461113 PSG9Q00887 426 aa9.25□□□□□ -0.93
HDAC4-207ENST00000461113 HAGHQ16775 308 aa9.25□□□□□ -0.93
HDAC4-207ENST00000461113 FAM122CQ6P4D5 195 aa9.25□□□□□ -0.93
HDAC4-207ENST00000461113 FOXI2Q6ZQN5 318 aa9.25□□□□□ -0.93
HDAC4-207ENST00000461113 MIR17HGQ75NE6 70 aa9.25□□□□□ -0.93
HDAC4-207ENST00000461113 ZNF738Q8NE65 137 aa9.25□□□□□ -0.93
HDAC4-207ENST00000461113 OR11H4Q8NGC9 324 aa9.25□□□□□ -0.93
HDAC4-207ENST00000461113 ZNF471Q9BX82 626 aaPredicted RBP9.25□□□□□ -0.93
HDAC4-207ENST00000461113 ACTR3CQ9C0K3 210 aaPredicted RBP9.25□□□□□ -0.93
HDAC4-207ENST00000461113 CSTL1Q9H114 145 aa9.25□□□□□ -0.93
HDAC4-207ENST00000461113 OR51M1Q9H341 326 aa9.25□□□□□ -0.93
HDAC4-207ENST00000461113 KNCNA6PVL3 124 aa9.24□□□□□ -0.93
HDAC4-207ENST00000461113 SOCS3O14543 225 aa9.24□□□□□ -0.93
HDAC4-207ENST00000461113 BCL2L11O43521 198 aa9.24□□□□□ -0.93
HDAC4-207ENST00000461113 DUSP14O95147 198 aaKnown RBP9.24□□□□□ -0.93
HDAC4-207ENST00000461113 PDE6HQ13956 83 aa9.24□□□□□ -0.93
HDAC4-207ENST00000461113 ZFP69Q49AA0 526 aa9.24□□□□□ -0.93
HDAC4-207ENST00000461113 TMEM41BQ5BJD5 291 aa9.24□□□□□ -0.93
HDAC4-207ENST00000461113 MORN5Q5VZ52 161 aa9.24□□□□□ -0.93
HDAC4-207ENST00000461113 EIF5AL1Q6IS14 154 aaKnown RBP9.24□□□□□ -0.93
HDAC4-207ENST00000461113 MORN3Q6PF18 240 aaPredicted RBP9.24□□□□□ -0.93
HDAC4-207ENST00000461113 PQLC2Q6ZP29 291 aa9.24□□□□□ -0.93
HDAC4-207ENST00000461113 TMUB2Q71RG4 321 aa9.24□□□□□ -0.93
HDAC4-207ENST00000461113 AAMDCQ9H7C9 122 aa9.24□□□□□ -0.93
HDAC4-207ENST00000461113 PPP1R14DQ9NXH3 145 aa9.24□□□□□ -0.93
HDAC4-207ENST00000461113 MRPS12O15235 138 aaKnown RBP9.23□□□□□ -0.93
HDAC4-207ENST00000461113 ZNF253O75346 499 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 NBEAP1P0C6P0 100 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 IGLC2P0DOY2 106 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 CDC34P49427 236 aaPredicted RBP9.23□□□□□ -0.93
HDAC4-207ENST00000461113 RAB2AP61019 212 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 UBE2L3P68036 154 aaKnown RBP9.23□□□□□ -0.93
HDAC4-207ENST00000461113 ZNF124Q15973 351 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 PSG3Q16557 428 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 LINC00322Q6ZN03 302 aaPredicted RBP9.23□□□□□ -0.93
HDAC4-207ENST00000461113 RPP25LQ8N5L8 163 aaKnown RBP9.23□□□□□ -0.93
HDAC4-207ENST00000461113 BLNKQ8WV28 456 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 RNF141Q8WVD5 230 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 SLC25A2Q9BXI2 301 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 ZNF331Q9NQX6 463 aaPredicted RBP9.23□□□□□ -0.93
HDAC4-207ENST00000461113 PRELID1Q9Y255 219 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 KMT2AQ03164 3969 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 DNAH10Q8IVF4 4471 aa9.23□□□□□ -0.93
HDAC4-207ENST00000461113 SNRPCP09234 159 aaKnown RBP9.22□□□□□ -0.93
HDAC4-207ENST00000461113 TPT1P13693 172 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms