RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 ZNF503Q96F45 646 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 C16orf92Q96LL3 132 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 MAP1LC3BQ9GZQ8 125 aa7.62□□□□□ -1.19
UPF2-204ENST00000460569 NOTCH1P46531 2555 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 H3BQ15 152 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 SLC17A3O00476 420 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 CXorf1O96002 111 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 CD7P09564 240 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 ZNF688P0C7X2 276 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 HIST1H1EP10412 219 aaKnown RBP7.61□□□□□ -1.19
UPF2-204ENST00000460569 ID1P41134 155 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 FGF8P55075 233 aaPredicted RBP7.61□□□□□ -1.19
UPF2-204ENST00000460569 GUK1Q16774 197 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 SAMD13Q5VXD3 122 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 FAM24BQ8N5W8 94 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 RNF141Q8WVD5 230 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 FXYD5Q96DB9 178 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 C17orf77Q96MU5 243 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 SLC50A1Q9BRV3 221 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 HRH4Q9H3N8 390 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 ZNF586Q9NXT0 402 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 UBQLN2Q9UHD9 624 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 DNHD1Q96M86 4753 aa7.61□□□□□ -1.19
UPF2-204ENST00000460569 TRBV19A0A075B6N1 114 aa7.6□□□□□ -1.19
UPF2-204ENST00000460569 A0A1B0GV50 99 aa7.6□□□□□ -1.19
UPF2-204ENST00000460569 ZNF705EA8MWA4 302 aaPredicted RBP7.6□□□□□ -1.19
UPF2-204ENST00000460569 ISLRO14498 428 aa7.6□□□□□ -1.19
UPF2-204ENST00000460569 SOCS3O14543 225 aa7.6□□□□□ -1.19
UPF2-204ENST00000460569 H2AFB1P0C5Y9 115 aa7.6□□□□□ -1.19
UPF2-204ENST00000460569 NBEAP1P0C6P0 100 aa7.6□□□□□ -1.19
UPF2-204ENST00000460569 GCHFRP30047 84 aa7.6□□□□□ -1.19
UPF2-204ENST00000460569 PSMB3P49720 205 aa7.6□□□□□ -1.19
UPF2-204ENST00000460569 SNRPD3P62318 126 aaKnown RBP7.6□□□□□ -1.19
UPF2-204ENST00000460569 KPRPQ5T749 579 aaPredicted RBP7.6□□□□□ -1.19
UPF2-204ENST00000460569 SFT2D1Q8WV19 159 aa7.6□□□□□ -1.19
UPF2-204ENST00000460569 MAP6D1Q9H9H5 199 aa7.6□□□□□ -1.19
UPF2-204ENST00000460569 NBEAL1Q6ZS30 2694 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 OR11H12B2RN74 326 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 ZNF253O75346 499 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 PRB2P02812 416 aaPredicted RBP7.59□□□□□ -1.19
UPF2-204ENST00000460569 DEFB131AP59861 70 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 PDE6HQ13956 83 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 ODF3L2Q3SX64 289 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 PSMG4Q5JS54 123 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 IGFL4Q6B9Z1 124 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 TEX261Q6UWH6 196 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 RNF182Q8N6D2 247 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 SAT2Q96F10 170 aaPredicted RBP7.59□□□□□ -1.19
UPF2-204ENST00000460569 LINC00052Q96N35 136 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 WFDC10AQ9H1F0 79 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 TMPRSS5Q9H3S3 457 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 ZNF331Q9NQX6 463 aaPredicted RBP7.59□□□□□ -1.19
UPF2-204ENST00000460569 TMEM167BQ9NRX6 74 aa7.59□□□□□ -1.19
UPF2-204ENST00000460569 TRAV8-2A0A0B4J237 113 aa7.58□□□□□ -1.2
UPF2-204ENST00000460569 TEX46H3BTG2 121 aa7.58□□□□□ -1.2
UPF2-204ENST00000460569 NDUFB4O95168 129 aa7.58□□□□□ -1.2
UPF2-204ENST00000460569 IFNA7P01567 189 aa7.58□□□□□ -1.2
UPF2-204ENST00000460569 HLA-DMBP28068 263 aa7.58□□□□□ -1.2
UPF2-204ENST00000460569 PSG9Q00887 426 aa7.58□□□□□ -1.2
UPF2-204ENST00000460569 ZNF680Q8NEM1 530 aa7.58□□□□□ -1.2
UPF2-204ENST00000460569 MBD3L1Q8WWY6 194 aa7.58□□□□□ -1.2
UPF2-204ENST00000460569 AAMDCQ9H7C9 122 aa7.58□□□□□ -1.2
UPF2-204ENST00000460569 AURKAIP1Q9NWT8 199 aaPredicted RBP7.58□□□□□ -1.2
UPF2-204ENST00000460569 HBE1P02100 147 aa7.57□□□□□ -1.2
UPF2-204ENST00000460569 CMC4P56277 68 aaPredicted RBP7.57□□□□□ -1.2
UPF2-204ENST00000460569 RANP62826 216 aaKnown RBP7.57□□□□□ -1.2
UPF2-204ENST00000460569 ICAM4Q14773 271 aa7.57□□□□□ -1.2
UPF2-204ENST00000460569 ZNF124Q15973 351 aa7.57□□□□□ -1.2
UPF2-204ENST00000460569 APRG1Q8IVJ8 170 aa7.57□□□□□ -1.2
UPF2-204ENST00000460569 EXOC3-AS1Q8N2X6 119 aa7.57□□□□□ -1.2
UPF2-204ENST00000460569 ZNF738Q8NE65 137 aa7.57□□□□□ -1.2
UPF2-204ENST00000460569 C20orf173Q96LM9 149 aa7.57□□□□□ -1.2
UPF2-204ENST00000460569 Q9H3A6 140 aa7.57□□□□□ -1.2
UPF2-204ENST00000460569 M0R3E3 92 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 PRB4P10163 310 aaPredicted RBP7.56□□□□□ -1.2
UPF2-204ENST00000460569 UBE2G2P60604 165 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 BLOC1S1P78537 153 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 PSG3Q16557 428 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 Q8N1Y9 231 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 LYPD1Q8N2G4 141 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 DEFB125Q8N687 156 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 SUN5Q8TC36 379 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 FAM110AQ9BQ89 295 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 C19orf73Q9NVV2 129 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 CLEC5AQ9NY25 188 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 CMYA5Q8N3K9 4069 aa7.56□□□□□ -1.2
UPF2-204ENST00000460569 TRAV1-1A0A0B4J248 108 aa7.55□□□□□ -1.2
UPF2-204ENST00000460569 KNCNA6PVL3 124 aa7.55□□□□□ -1.2
UPF2-204ENST00000460569 ZNF705FA8MVS1 300 aaPredicted RBP7.55□□□□□ -1.2
UPF2-204ENST00000460569 DEFB1P60022 68 aa7.55□□□□□ -1.2
UPF2-204ENST00000460569 ACTL10Q5JWF8 245 aa7.55□□□□□ -1.2
UPF2-204ENST00000460569 RPUSD4Q96CM3 377 aaKnown RBP7.55□□□□□ -1.2
UPF2-204ENST00000460569 SRD5A3Q9H8P0 318 aa7.55□□□□□ -1.2
UPF2-204ENST00000460569 OTORQ9NRC9 128 aa7.55□□□□□ -1.2
UPF2-204ENST00000460569 RPH3ALQ9UNE2 315 aa7.55□□□□□ -1.2
UPF2-204ENST00000460569 PRELID1Q9Y255 219 aa7.55□□□□□ -1.2
UPF2-204ENST00000460569 YTHDF2Q9Y5A9 579 aaKnown RBP7.55□□□□□ -1.2
UPF2-204ENST00000460569 PGPA6NDG6 321 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 GGTLC3B5MD39 225 aa7.54□□□□□ -1.2
UPF2-204ENST00000460569 F6UB75 175 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms