RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 FAM30AQ9NZY2 134 aa11.62□□□□□ -0.55
UBE2D4-209ENST00000454428 SHPKQ9UHJ6 478 aa11.62□□□□□ -0.55
UBE2D4-209ENST00000454428 SNURFLB1AK76 121 aa11.61□□□□□ -0.55
UBE2D4-209ENST00000454428 FAM25AB3EWG3 89 aa11.61□□□□□ -0.55
UBE2D4-209ENST00000454428 FAM25CB3EWG5 89 aa11.61□□□□□ -0.55
UBE2D4-209ENST00000454428 FAM25GB3EWG6 89 aa11.61□□□□□ -0.55
UBE2D4-209ENST00000454428 PITX3O75364 302 aa11.61□□□□□ -0.55
UBE2D4-209ENST00000454428 DAZ2Q13117 558 aaKnown RBP11.61□□□□□ -0.55
UBE2D4-209ENST00000454428 SERTAD4-AS1Q5TG53 156 aa11.61□□□□□ -0.55
UBE2D4-209ENST00000454428 CCDC28AQ8IWP9 274 aa11.61□□□□□ -0.55
UBE2D4-209ENST00000454428 OR1S1Q8NH92 325 aa11.61□□□□□ -0.55
UBE2D4-209ENST00000454428 EXTL2Q9UBQ6 330 aa11.61□□□□□ -0.55
UBE2D4-209ENST00000454428 MRPS12O15235 138 aaKnown RBP11.6□□□□□ -0.55
UBE2D4-209ENST00000454428 RAB11AP62491 216 aa11.6□□□□□ -0.55
UBE2D4-209ENST00000454428 PRAC2D3DTV9 90 aa11.59□□□□□ -0.55
UBE2D4-209ENST00000454428 RPL7P18124 248 aaKnown RBP11.59□□□□□ -0.55
UBE2D4-209ENST00000454428 VBP1P61758 197 aa11.59□□□□□ -0.55
UBE2D4-209ENST00000454428 LYPD5Q6UWN5 251 aa11.58□□□□□ -0.56
UBE2D4-209ENST00000454428 Q9H521 79 aa11.58□□□□□ -0.56
UBE2D4-209ENST00000454428 MSRB1Q9NZV6 116 aa11.58□□□□□ -0.56
UBE2D4-209ENST00000454428 PAIP2BQ9ULR5 123 aaKnown RBP11.58□□□□□ -0.56
UBE2D4-209ENST00000454428 LINC00854A0A1B0GVQ3 168 aa11.57□□□□□ -0.56
UBE2D4-209ENST00000454428 DISC1C4P0D8 188 aa11.57□□□□□ -0.56
UBE2D4-209ENST00000454428 AKR1C4P17516 323 aa11.57□□□□□ -0.56
UBE2D4-209ENST00000454428 ZBTB8BQ8NAP8 495 aaPredicted RBP11.57□□□□□ -0.56
UBE2D4-209ENST00000454428 C11orf72Q8NBR9 251 aa11.57□□□□□ -0.56
UBE2D4-209ENST00000454428 LINC00467Q9BRT7 94 aa11.57□□□□□ -0.56
UBE2D4-209ENST00000454428 HIGD1AQ9Y241 93 aa11.57□□□□□ -0.56
UBE2D4-209ENST00000454428 KCNIP3Q9Y2W7 256 aa11.57□□□□□ -0.56
UBE2D4-209ENST00000454428 ICOSQ9Y6W8 199 aa11.57□□□□□ -0.56
UBE2D4-209ENST00000454428 TRGV2A0A075B6R0 118 aa11.56□□□□□ -0.56
UBE2D4-209ENST00000454428 IGLV5-52A0A0A0MRZ9 124 aa11.56□□□□□ -0.56
UBE2D4-209ENST00000454428 TRAV12-3A0A0B4J271 114 aa11.56□□□□□ -0.56
UBE2D4-209ENST00000454428 LRCOL1A6NCL2 159 aa11.56□□□□□ -0.56
UBE2D4-209ENST00000454428 ZNF324O75467 553 aaPredicted RBP11.56□□□□□ -0.56
UBE2D4-209ENST00000454428 S100A7P31151 101 aa11.56□□□□□ -0.56
UBE2D4-209ENST00000454428 CYP2G1PQ6ZSU1 146 aa11.56□□□□□ -0.56
UBE2D4-209ENST00000454428 ACOT7LQ6ZUV0 252 aa11.56□□□□□ -0.56
UBE2D4-209ENST00000454428 OR51S1Q8NGJ8 323 aa11.56□□□□□ -0.56
UBE2D4-209ENST00000454428 ZNF331Q9NQX6 463 aaPredicted RBP11.56□□□□□ -0.56
UBE2D4-209ENST00000454428 GSN-AS1Q9NRJ2 163 aa11.56□□□□□ -0.56
UBE2D4-209ENST00000454428 PMS2P5A8MQ11 134 aa11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 J3KRW8 73 aa11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 PAX4O43316 350 aa11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 SNRPCP09234 159 aaKnown RBP11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 PLP1P60201 277 aa11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 SSBP1Q04837 148 aaKnown RBP11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 PATE2Q6UY27 113 aa11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 CCDC190Q86UF4 302 aa11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 WFDC10BQ8IUB3 73 aa11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 LRRC20Q8TCA0 184 aa11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 ZNF431Q8TF32 576 aaPredicted RBP11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 FUNDC2Q9BWH2 189 aa11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 FUT9Q9Y231 359 aa11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 LY96Q9Y6Y9 160 aa11.55□□□□□ -0.56
UBE2D4-209ENST00000454428 HYPMO75409 117 aa11.54□□□□□ -0.56
UBE2D4-209ENST00000454428 CT45A10P0DMU9 189 aa11.54□□□□□ -0.56
UBE2D4-209ENST00000454428 RAP2BP61225 183 aa11.54□□□□□ -0.56
UBE2D4-209ENST00000454428 AKR1C1Q04828 323 aa11.54□□□□□ -0.56
UBE2D4-209ENST00000454428 MZT2AQ6P582 158 aa11.54□□□□□ -0.56
UBE2D4-209ENST00000454428 SYT8Q8NBV8 401 aa11.54□□□□□ -0.56
UBE2D4-209ENST00000454428 PYGO2Q9BRQ0 406 aa11.54□□□□□ -0.56
UBE2D4-209ENST00000454428 MIXL1Q9H2W2 232 aa11.54□□□□□ -0.56
UBE2D4-209ENST00000454428 RNF213Q63HN8 5207 aa11.54□□□□□ -0.56
UBE2D4-209ENST00000454428 TRAV9-2A0A087WT02 112 aa11.53□□□□□ -0.56
UBE2D4-209ENST00000454428 TRGV1A0A0A0MS02 117 aa11.53□□□□□ -0.56
UBE2D4-209ENST00000454428 NPIPB6E9PJ23 425 aa11.53□□□□□ -0.56
UBE2D4-209ENST00000454428 SLC17A3O00476 420 aa11.53□□□□□ -0.56
UBE2D4-209ENST00000454428 IL5P05113 134 aa11.53□□□□□ -0.56
UBE2D4-209ENST00000454428 LINC00869P0C866 280 aa11.53□□□□□ -0.56
UBE2D4-209ENST00000454428 AKAIN1P0CW23 69 aa11.53□□□□□ -0.56
UBE2D4-209ENST00000454428 TEPPQ6URK8 271 aa11.53□□□□□ -0.56
UBE2D4-209ENST00000454428 DEFB104AQ8WTQ1 72 aa11.53□□□□□ -0.56
UBE2D4-209ENST00000454428 NTN5Q8WTR8 489 aaPredicted RBP11.53□□□□□ -0.56
UBE2D4-209ENST00000454428 PRRT1Q99946 306 aa11.53□□□□□ -0.56
UBE2D4-209ENST00000454428 SPINK4O60575 86 aa11.52□□□□□ -0.57
UBE2D4-209ENST00000454428 PLA2G1BP04054 148 aaKnown RBP11.52□□□□□ -0.57
UBE2D4-209ENST00000454428 OR5G3P0C626 314 aa11.52□□□□□ -0.57
UBE2D4-209ENST00000454428 CXCL2P19875 107 aa11.52□□□□□ -0.57
UBE2D4-209ENST00000454428 C15orf40Q8WUR7 153 aa11.52□□□□□ -0.57
UBE2D4-209ENST00000454428 SMIM4Q8WVI0 70 aa11.52□□□□□ -0.57
UBE2D4-209ENST00000454428 ST6GAL2Q96JF0 529 aa11.52□□□□□ -0.57
UBE2D4-209ENST00000454428 KLF12Q9Y4X4 402 aa11.52□□□□□ -0.57
UBE2D4-209ENST00000454428 H3BP45 60 aa11.51□□□□□ -0.57
UBE2D4-209ENST00000454428 WRBO00258 174 aa11.51□□□□□ -0.57
UBE2D4-209ENST00000454428 IGHV3-53P01767 116 aa11.51□□□□□ -0.57
UBE2D4-209ENST00000454428 CRYBA4P53673 196 aa11.51□□□□□ -0.57
UBE2D4-209ENST00000454428 SRPXP78539 464 aa11.51□□□□□ -0.57
UBE2D4-209ENST00000454428 LCN15Q6UWW0 184 aa11.51□□□□□ -0.57
UBE2D4-209ENST00000454428 CLVS1Q8IUQ0 354 aaPredicted RBP11.51□□□□□ -0.57
UBE2D4-209ENST00000454428 LINC00528Q8N1L1 170 aa11.51□□□□□ -0.57
UBE2D4-209ENST00000454428 PLA2G2DQ9UNK4 145 aa11.51□□□□□ -0.57
UBE2D4-209ENST00000454428 LRP2P98164 4655 aa11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 H3BTX0 84 aa11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 K7EP13 123 aa11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 SYNGR2O43760 224 aa11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 PRAF2O60831 178 aa11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 SLC25A6P12236 298 aa11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 KRTAP10-4P60372 401 aaPredicted RBP11.5□□□□□ -0.57
UBE2D4-209ENST00000454428 SPANXN5Q5MJ07 72 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms