RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ZNF331Q9NQX6 463 aaPredicted RBP11.63□□□□□ -0.55
SCAMP4-205ENST00000452128 RNF24Q9Y225 148 aa11.63□□□□□ -0.55
SCAMP4-205ENST00000452128 VPS13DQ5THJ4 4388 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 IGHV4-28A0A0C4DH34 117 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 DEFB4AO15263 64 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 COX7A2P2O60397 106 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 MIFP14174 115 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 FGF7P21781 194 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 B2MP61769 119 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 PSG9Q00887 426 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 CEMP1Q6PRD7 247 aaPredicted RBP11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 Q6ZRG5 221 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 OR11H7Q8NGC8 314 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 NEU1Q99519 415 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 C1QTNF4Q9BXJ3 329 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 NPCDR1Q9BY65 106 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 SLC35B3Q9H1N7 401 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 HRH4Q9H3N8 390 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 PXMP4Q9Y6I8 212 aa11.62□□□□□ -0.55
SCAMP4-205ENST00000452128 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
SCAMP4-205ENST00000452128 CXCL2P19875 107 aa11.61□□□□□ -0.55
SCAMP4-205ENST00000452128 PSG3Q16557 428 aa11.61□□□□□ -0.55
SCAMP4-205ENST00000452128 GCSAMLQ5JQS6 135 aa11.61□□□□□ -0.55
SCAMP4-205ENST00000452128 EBLN2Q6P2I7 272 aa11.61□□□□□ -0.55
SCAMP4-205ENST00000452128 C1orf158Q8N1D5 194 aa11.61□□□□□ -0.55
SCAMP4-205ENST00000452128 OR1L4Q8NGR5 311 aa11.61□□□□□ -0.55
SCAMP4-205ENST00000452128 THAP6Q8TBB0 222 aa11.61□□□□□ -0.55
SCAMP4-205ENST00000452128 WDR61Q9GZS3 305 aaKnown RBP11.61□□□□□ -0.55
SCAMP4-205ENST00000452128 HSPB11Q9Y547 144 aa11.61□□□□□ -0.55
SCAMP4-205ENST00000452128 SLC17A3O00476 420 aa11.6□□□□□ -0.55
SCAMP4-205ENST00000452128 CRXO43186 299 aaPredicted RBP11.6□□□□□ -0.55
SCAMP4-205ENST00000452128 CNN1P51911 297 aaKnown RBP11.6□□□□□ -0.55
SCAMP4-205ENST00000452128 FXYD7P58549 80 aa11.6□□□□□ -0.55
SCAMP4-205ENST00000452128 FCN2Q15485 313 aa11.6□□□□□ -0.55
SCAMP4-205ENST00000452128 BPIFA4PQ86YQ2 179 aa11.6□□□□□ -0.55
SCAMP4-205ENST00000452128 OR4B1Q8NGF8 309 aa11.6□□□□□ -0.55
SCAMP4-205ENST00000452128 FAM167A-AS1Q96KT0 104 aa11.6□□□□□ -0.55
SCAMP4-205ENST00000452128 WFDC1Q9HC57 220 aa11.6□□□□□ -0.55
SCAMP4-205ENST00000452128 MBD2Q9UBB5 411 aa11.6□□□□□ -0.55
SCAMP4-205ENST00000452128 NANOS2P60321 138 aaKnown RBP11.59□□□□□ -0.55
SCAMP4-205ENST00000452128 FGL1Q08830 312 aa11.59□□□□□ -0.55
SCAMP4-205ENST00000452128 CLINT1Q14677 625 aa11.59□□□□□ -0.55
SCAMP4-205ENST00000452128 OR8A1Q8NGG7 326 aa11.59□□□□□ -0.55
SCAMP4-205ENST00000452128 PFDN5Q99471 154 aa11.59□□□□□ -0.55
SCAMP4-205ENST00000452128 ZNF586Q9NXT0 402 aa11.59□□□□□ -0.55
SCAMP4-205ENST00000452128 TMEM14CQ9P0S9 112 aa11.59□□□□□ -0.55
SCAMP4-205ENST00000452128 DUSP14O95147 198 aaKnown RBP11.58□□□□□ -0.56
SCAMP4-205ENST00000452128 NDUFB4O95168 129 aa11.58□□□□□ -0.56
SCAMP4-205ENST00000452128 SNRPCP09234 159 aaKnown RBP11.58□□□□□ -0.56
SCAMP4-205ENST00000452128 RPL12P30050 165 aaKnown RBP11.58□□□□□ -0.56
SCAMP4-205ENST00000452128 Q5BKY6 102 aa11.58□□□□□ -0.56
SCAMP4-205ENST00000452128 LCN15Q6UWW0 184 aa11.58□□□□□ -0.56
SCAMP4-205ENST00000452128 C11orf45Q8TAV5 145 aa11.58□□□□□ -0.56
SCAMP4-205ENST00000452128 PHLDA1Q8WV24 401 aaPredicted RBP11.58□□□□□ -0.56
SCAMP4-205ENST00000452128 ATP5SQ99766 215 aa11.58□□□□□ -0.56
SCAMP4-205ENST00000452128 CXorf65A6NEN9 183 aa11.57□□□□□ -0.56
SCAMP4-205ENST00000452128 PRAC2D3DTV9 90 aa11.57□□□□□ -0.56
SCAMP4-205ENST00000452128 ZNF253O75346 499 aa11.57□□□□□ -0.56
SCAMP4-205ENST00000452128 PMS2P11Q13670 270 aa11.57□□□□□ -0.56
SCAMP4-205ENST00000452128 OXA1LQ15070 435 aa11.57□□□□□ -0.56
SCAMP4-205ENST00000452128 ZNF738Q8NE65 137 aa11.57□□□□□ -0.56
SCAMP4-205ENST00000452128 SLC50A1Q9BRV3 221 aa11.57□□□□□ -0.56
SCAMP4-205ENST00000452128 PARD6GQ9BYG4 376 aaPredicted RBP11.57□□□□□ -0.56
SCAMP4-205ENST00000452128 KMT2AQ03164 3969 aa11.57□□□□□ -0.56
SCAMP4-205ENST00000452128 TRBV19A0A075B6N1 114 aa11.56□□□□□ -0.56
SCAMP4-205ENST00000452128 NUPR2A6NF83 97 aa11.56□□□□□ -0.56
SCAMP4-205ENST00000452128 SMIM9A6NGZ8 99 aa11.56□□□□□ -0.56
SCAMP4-205ENST00000452128 H3BTX0 84 aa11.56□□□□□ -0.56
SCAMP4-205ENST00000452128 PET100P0DJ07 73 aa11.56□□□□□ -0.56
SCAMP4-205ENST00000452128 GUK1Q16774 197 aa11.56□□□□□ -0.56
SCAMP4-205ENST00000452128 RPUSD4Q96CM3 377 aaKnown RBP11.56□□□□□ -0.56
SCAMP4-205ENST00000452128 IGF2BP2-AS1Q96M15 143 aa11.56□□□□□ -0.56
SCAMP4-205ENST00000452128 SLC25A2Q9BXI2 301 aa11.56□□□□□ -0.56
SCAMP4-205ENST00000452128 MFFQ9GZY8 342 aa11.56□□□□□ -0.56
SCAMP4-205ENST00000452128 CELA1Q9UNI1 258 aa11.56□□□□□ -0.56
SCAMP4-205ENST00000452128 PRB4P10163 310 aaPredicted RBP11.55□□□□□ -0.56
SCAMP4-205ENST00000452128 HIST1H1EP10412 219 aaKnown RBP11.55□□□□□ -0.56
SCAMP4-205ENST00000452128 MIR17HGQ75NE6 70 aa11.55□□□□□ -0.56
SCAMP4-205ENST00000452128 MED28Q9H204 178 aa11.55□□□□□ -0.56
SCAMP4-205ENST00000452128 RFNGQ9Y644 331 aa11.55□□□□□ -0.56
SCAMP4-205ENST00000452128 M0R2Z0 102 aa11.54□□□□□ -0.56
SCAMP4-205ENST00000452128 AMBPP02760 352 aa11.54□□□□□ -0.56
SCAMP4-205ENST00000452128 C12orf74Q32Q52 190 aa11.54□□□□□ -0.56
SCAMP4-205ENST00000452128 ZNF503Q96F45 646 aa11.54□□□□□ -0.56
SCAMP4-205ENST00000452128 G3V3Q6 166 aa11.53□□□□□ -0.56
SCAMP4-205ENST00000452128 GIPP09681 153 aaPredicted RBP11.53□□□□□ -0.56
SCAMP4-205ENST00000452128 PYYP10082 97 aa11.53□□□□□ -0.56
SCAMP4-205ENST00000452128 SPINK13Q1W4C9 94 aa11.53□□□□□ -0.56
SCAMP4-205ENST00000452128 LRRC20Q8TCA0 184 aa11.53□□□□□ -0.56
SCAMP4-205ENST00000452128 AQP10Q96PS8 301 aa11.53□□□□□ -0.56
SCAMP4-205ENST00000452128 BOLA2-SMG1P6H3BVE0 249 aa11.52□□□□□ -0.57
SCAMP4-205ENST00000452128 HIST1H1AQ02539 215 aaPredicted RBP11.52□□□□□ -0.57
SCAMP4-205ENST00000452128 PDE6HQ13956 83 aa11.52□□□□□ -0.57
SCAMP4-205ENST00000452128 RGS21Q2M5E4 152 aa11.52□□□□□ -0.57
SCAMP4-205ENST00000452128 ASB13Q8WXK3 278 aa11.52□□□□□ -0.57
SCAMP4-205ENST00000452128 FXYD5Q96DB9 178 aa11.52□□□□□ -0.57
SCAMP4-205ENST00000452128 MRPL53Q96EL3 112 aaKnown RBP11.52□□□□□ -0.57
SCAMP4-205ENST00000452128 SMIM3Q9BZL3 60 aa11.52□□□□□ -0.57
SCAMP4-205ENST00000452128 PRM2P04554 102 aa11.51□□□□□ -0.57
SCAMP4-205ENST00000452128 KIR3DS1Q14943 382 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms