RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 ANXA7P20073 488 aaKnown RBP12.43□□□□□ -0.42
CHCHD3-203ENST00000448878 Q5VSD8 79 aa12.43□□□□□ -0.42
CHCHD3-203ENST00000448878 CCDC190Q86UF4 302 aa12.43□□□□□ -0.42
CHCHD3-203ENST00000448878 RPUSD4Q96CM3 377 aaKnown RBP12.43□□□□□ -0.42
CHCHD3-203ENST00000448878 CIB3Q96Q77 187 aaPredicted RBP12.43□□□□□ -0.42
CHCHD3-203ENST00000448878 PIGBOS1A0A0B4J2F0 54 aa12.42□□□□□ -0.42
CHCHD3-203ENST00000448878 H3BP45 60 aa12.42□□□□□ -0.42
CHCHD3-203ENST00000448878 J3KRW8 73 aa12.42□□□□□ -0.42
CHCHD3-203ENST00000448878 PITX3O75364 302 aa12.42□□□□□ -0.42
CHCHD3-203ENST00000448878 HYPMO75409 117 aa12.42□□□□□ -0.42
CHCHD3-203ENST00000448878 CYP2G1PQ6ZSU1 146 aa12.42□□□□□ -0.42
CHCHD3-203ENST00000448878 TMED4Q7Z7H5 227 aa12.42□□□□□ -0.42
CHCHD3-203ENST00000448878 DIRAS2Q96HU8 199 aa12.42□□□□□ -0.42
CHCHD3-203ENST00000448878 SHANK2-AS3Q9BTD1 123 aa12.42□□□□□ -0.42
CHCHD3-203ENST00000448878 PARD6GQ9BYG4 376 aaPredicted RBP12.42□□□□□ -0.42
CHCHD3-203ENST00000448878 SYNGR2O43760 224 aa12.41□□□□□ -0.42
CHCHD3-203ENST00000448878 IFNA5P01569 189 aa12.41□□□□□ -0.42
CHCHD3-203ENST00000448878 SNRPCP09234 159 aaKnown RBP12.41□□□□□ -0.42
CHCHD3-203ENST00000448878 XGP55808 180 aa12.41□□□□□ -0.42
CHCHD3-203ENST00000448878 ERVFC1-1P60608 527 aa12.41□□□□□ -0.42
CHCHD3-203ENST00000448878 KIR3DS1Q14943 382 aa12.41□□□□□ -0.42
CHCHD3-203ENST00000448878 CTF1Q16619 201 aa12.41□□□□□ -0.42
CHCHD3-203ENST00000448878 ACOT7LQ6ZUV0 252 aa12.41□□□□□ -0.42
CHCHD3-203ENST00000448878 ANKRD20A5PA0PJZ0 165 aa12.4□□□□□ -0.42
CHCHD3-203ENST00000448878 PRSS46E5RG02 174 aa12.4□□□□□ -0.42
CHCHD3-203ENST00000448878 VAMP1P23763 118 aa12.4□□□□□ -0.42
CHCHD3-203ENST00000448878 TMPRSS5Q9H3S3 457 aa12.4□□□□□ -0.42
CHCHD3-203ENST00000448878 STRAPQ9Y3F4 350 aaKnown RBP12.4□□□□□ -0.42
CHCHD3-203ENST00000448878 DUXBA0A1W2PPF3 345 aa12.39□□□□□ -0.43
CHCHD3-203ENST00000448878 H3BNG1 76 aa12.39□□□□□ -0.43
CHCHD3-203ENST00000448878 SIVA1O15304 175 aa12.39□□□□□ -0.43
CHCHD3-203ENST00000448878 LINC00869P0C866 280 aa12.39□□□□□ -0.43
CHCHD3-203ENST00000448878 S100A7AQ86SG5 101 aa12.39□□□□□ -0.43
CHCHD3-203ENST00000448878 C20orf144Q9BQM9 153 aa12.39□□□□□ -0.43
CHCHD3-203ENST00000448878 A0A087X0K7 114 aa12.38□□□□□ -0.43
CHCHD3-203ENST00000448878 A0A096LPF7 62 aa12.38□□□□□ -0.43
CHCHD3-203ENST00000448878 CTDSPLO15194 276 aa12.38□□□□□ -0.43
CHCHD3-203ENST00000448878 SMR3BP02814 79 aaPredicted RBP12.38□□□□□ -0.43
CHCHD3-203ENST00000448878 LINC00612Q8N6U2 182 aa12.38□□□□□ -0.43
CHCHD3-203ENST00000448878 ARL6Q9H0F7 186 aa12.38□□□□□ -0.43
CHCHD3-203ENST00000448878 TNFRSF18Q9Y5U5 241 aa12.38□□□□□ -0.43
CHCHD3-203ENST00000448878 TRGV2A0A075B6R0 118 aa12.37□□□□□ -0.43
CHCHD3-203ENST00000448878 PMS2P5A8MQ11 134 aa12.37□□□□□ -0.43
CHCHD3-203ENST00000448878 HOXB5P09067 269 aa12.37□□□□□ -0.43
CHCHD3-203ENST00000448878 SLC25A6P12236 298 aa12.37□□□□□ -0.43
CHCHD3-203ENST00000448878 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
CHCHD3-203ENST00000448878 Q6ZRN7 208 aaPredicted RBP12.37□□□□□ -0.43
CHCHD3-203ENST00000448878 MDFICQ9P1T7 246 aa12.37□□□□□ -0.43
CHCHD3-203ENST00000448878 TRAV12-3A0A0B4J271 114 aa12.36□□□□□ -0.43
CHCHD3-203ENST00000448878 RRAS2P62070 204 aaPredicted RBP12.36□□□□□ -0.43
CHCHD3-203ENST00000448878 TMEM128Q5BJH2 165 aa12.36□□□□□ -0.43
CHCHD3-203ENST00000448878 CDPF1Q6NVV7 123 aa12.36□□□□□ -0.43
CHCHD3-203ENST00000448878 Q6ZTI0 123 aa12.36□□□□□ -0.43
CHCHD3-203ENST00000448878 RABL2AQ9UBK7 228 aaPredicted RBP12.36□□□□□ -0.43
CHCHD3-203ENST00000448878 RABL2BQ9UNT1 228 aa12.36□□□□□ -0.43
CHCHD3-203ENST00000448878 DMBT1Q9UGM3 2413 aaPredicted RBP12.36□□□□□ -0.43
CHCHD3-203ENST00000448878 H3BTX0 84 aa12.35□□□□□ -0.43
CHCHD3-203ENST00000448878 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
CHCHD3-203ENST00000448878 VSIG2Q96IQ7 327 aa12.35□□□□□ -0.43
CHCHD3-203ENST00000448878 ARV1Q9H2C2 271 aa12.35□□□□□ -0.43
CHCHD3-203ENST00000448878 RNF24Q9Y225 148 aa12.35□□□□□ -0.43
CHCHD3-203ENST00000448878 NXPH4O95158 308 aa12.34□□□□□ -0.43
CHCHD3-203ENST00000448878 DNAH10OSP0CZ25 163 aa12.34□□□□□ -0.43
CHCHD3-203ENST00000448878 PLP1P60201 277 aa12.34□□□□□ -0.43
CHCHD3-203ENST00000448878 KRTAP10-1P60331 282 aa12.34□□□□□ -0.43
CHCHD3-203ENST00000448878 SELENOTP62341 195 aa12.34□□□□□ -0.43
CHCHD3-203ENST00000448878 SLC50A1Q9BRV3 221 aa12.34□□□□□ -0.43
CHCHD3-203ENST00000448878 ZNF331Q9NQX6 463 aaPredicted RBP12.34□□□□□ -0.43
CHCHD3-203ENST00000448878 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
CHCHD3-203ENST00000448878 RSL24D1Q9UHA3 163 aaKnown RBP12.34□□□□□ -0.43
CHCHD3-203ENST00000448878 PRAC2D3DTV9 90 aa12.33□□□□□ -0.44
CHCHD3-203ENST00000448878 FAM229AH3BQW9 127 aa12.33□□□□□ -0.44
CHCHD3-203ENST00000448878 FAUP35544 74 aaKnown RBP12.33□□□□□ -0.44
CHCHD3-203ENST00000448878 ICAM4Q14773 271 aa12.33□□□□□ -0.44
CHCHD3-203ENST00000448878 PATE2Q6UY27 113 aa12.33□□□□□ -0.44
CHCHD3-203ENST00000448878 LRTM2Q8N967 370 aa12.33□□□□□ -0.44
CHCHD3-203ENST00000448878 C18orf15Q96N68 181 aa12.33□□□□□ -0.44
CHCHD3-203ENST00000448878 TRGV1A0A0A0MS02 117 aa12.32□□□□□ -0.44
CHCHD3-203ENST00000448878 CXCL2P19875 107 aa12.32□□□□□ -0.44
CHCHD3-203ENST00000448878 LEPP41159 167 aa12.32□□□□□ -0.44
CHCHD3-203ENST00000448878 POLR2GP62487 172 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHCHD3-203ENST00000448878 DAZ2Q13117 558 aaKnown RBP12.32□□□□□ -0.44
CHCHD3-203ENST00000448878 SPCS2Q15005 226 aa12.32□□□□□ -0.44
CHCHD3-203ENST00000448878 LINC00305Q7Z4B0 112 aa12.32□□□□□ -0.44
CHCHD3-203ENST00000448878 NFE4Q86UQ8 179 aa12.32□□□□□ -0.44
CHCHD3-203ENST00000448878 PYGO2Q9BRQ0 406 aa12.32□□□□□ -0.44
CHCHD3-203ENST00000448878 NPVFQ9HCQ7 196 aa12.32□□□□□ -0.44
CHCHD3-203ENST00000448878 ICOSQ9Y6W8 199 aa12.32□□□□□ -0.44
CHCHD3-203ENST00000448878 J3QL48 77 aa12.31□□□□□ -0.44
CHCHD3-203ENST00000448878 GOSR2O14653 212 aa12.31□□□□□ -0.44
CHCHD3-203ENST00000448878 PAX4O43316 350 aa12.31□□□□□ -0.44
CHCHD3-203ENST00000448878 SFT2D2O95562 160 aa12.31□□□□□ -0.44
CHCHD3-203ENST00000448878 SLC38A11Q08AI6 406 aa12.31□□□□□ -0.44
CHCHD3-203ENST00000448878 BPIFA4PQ86YQ2 179 aa12.31□□□□□ -0.44
CHCHD3-203ENST00000448878 GSN-AS1Q9NRJ2 163 aa12.31□□□□□ -0.44
CHCHD3-203ENST00000448878 FUT9Q9Y231 359 aa12.31□□□□□ -0.44
CHCHD3-203ENST00000448878 TRAV9-2A0A087WT02 112 aa12.3□□□□□ -0.44
CHCHD3-203ENST00000448878 A0A087WTM6 91 aa12.3□□□□□ -0.44
CHCHD3-203ENST00000448878 FABP12A6NFH5 140 aa12.3□□□□□ -0.44
CHCHD3-203ENST00000448878 MRPS12O15235 138 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms