RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 MRPL51Q4U2R6 128 aaKnown RBP12.73□□□□□ -0.37
CNOT3-204ENST00000447684 LCNL1Q6ZST4 164 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 MDS2Q8NDY4 140 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 C8orf46Q8TAG6 207 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 COL27A1Q8IZC6 1860 aaPredicted RBP12.73□□□□□ -0.37
CNOT3-204ENST00000447684 TRBV25-1A0A075B6N4 114 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 PRR33A8MZF0 331 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 CT45A10P0DMU9 189 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 FAM104BQ5XKR9 115 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 FOXI2Q6ZQN5 318 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 OR10X1Q8NGY0 326 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 C8orf49Q96NF6 230 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 PSG8Q9UQ74 426 aa12.73□□□□□ -0.37
CNOT3-204ENST00000447684 MAP1BP46821 2468 aaKnown RBP12.72□□□□□ -0.37
CNOT3-204ENST00000447684 CCL3L1P16619 93 aa12.72□□□□□ -0.37
CNOT3-204ENST00000447684 SPATA25Q9BR10 227 aa12.72□□□□□ -0.37
CNOT3-204ENST00000447684 TPRP12270 2363 aaKnown RBP12.72□□□□□ -0.37
CNOT3-204ENST00000447684 IGLL5B9A064 214 aa12.72□□□□□ -0.37
CNOT3-204ENST00000447684 CRIP1P50238 77 aa12.72□□□□□ -0.37
CNOT3-204ENST00000447684 GAGE13Q4V321 117 aa12.72□□□□□ -0.37
CNOT3-204ENST00000447684 OR4C13Q8NGP0 309 aa12.72□□□□□ -0.37
CNOT3-204ENST00000447684 A0A1B0GW15 77 aa12.71□□□□□ -0.37
CNOT3-204ENST00000447684 A0A1B0GWB2 263 aa12.71□□□□□ -0.37
CNOT3-204ENST00000447684 M0R3E3 92 aa12.71□□□□□ -0.37
CNOT3-204ENST00000447684 CEND1Q8N111 149 aa12.71□□□□□ -0.37
CNOT3-204ENST00000447684 TMEM167AQ8TBQ9 72 aa12.71□□□□□ -0.37
CNOT3-204ENST00000447684 PHLDA1Q8WV24 401 aaPredicted RBP12.71□□□□□ -0.37
CNOT3-204ENST00000447684 RBP4P02753 201 aa12.71□□□□□ -0.38
CNOT3-204ENST00000447684 TWIST1Q15672 202 aa12.71□□□□□ -0.38
CNOT3-204ENST00000447684 TRGV9Q99603 122 aa12.71□□□□□ -0.38
CNOT3-204ENST00000447684 C20orf78Q9BR46 151 aa12.71□□□□□ -0.38
CNOT3-204ENST00000447684 SPRY4Q9C004 299 aa12.71□□□□□ -0.38
CNOT3-204ENST00000447684 KIR2DL2P43627 348 aaPredicted RBP12.7□□□□□ -0.38
CNOT3-204ENST00000447684 ZC2HC1BQ5TFG8 222 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 MRAP2Q96G30 205 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 SLC25A39Q9BZJ4 359 aaPredicted RBP12.7□□□□□ -0.38
CNOT3-204ENST00000447684 TMEM160Q9NX00 188 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 SIT1Q9Y3P8 196 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 DSCAML1Q8TD84 2053 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 E9PLD3 99 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 LEPP41159 167 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 ZNF833PQ6ZTB9 187 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 FAM169BQ8N8A8 192 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 RITA1Q96K30 269 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 GAFA1Q96PS6 74 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 FOXC2Q99958 501 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 AGRNO00468 2067 aa12.7□□□□□ -0.38
CNOT3-204ENST00000447684 WI2-2373I1.2A0A1W2PRP0 233 aa12.69□□□□□ -0.38
CNOT3-204ENST00000447684 C16orf97H3BN30 126 aa12.69□□□□□ -0.38
CNOT3-204ENST00000447684 M0R1B8 84 aa12.69□□□□□ -0.38
CNOT3-204ENST00000447684 RNF7Q9UBF6 113 aa12.69□□□□□ -0.38
CNOT3-204ENST00000447684 INS-IGF2F8WCM5 200 aa12.69□□□□□ -0.38
CNOT3-204ENST00000447684 MC5RP33032 325 aa12.69□□□□□ -0.38
CNOT3-204ENST00000447684 TMEM133Q9H2Q1 129 aa12.69□□□□□ -0.38
CNOT3-204ENST00000447684 APOMO95445 188 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 LHBP01229 141 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 IGKCP01834 107 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 EVI2AP22794 236 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 ATP1A1-AS1Q5TC04 95 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 Q6AWC8 147 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 ZNF562Q6V9R5 426 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 C1orf162Q8NEQ5 155 aaPredicted RBP12.68□□□□□ -0.38
CNOT3-204ENST00000447684 HIST1H4GQ99525 98 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 IGLV1-44P01699 117 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 ODF1Q14990 250 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 VMA21Q3ZAQ7 101 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 ZNF493Q6ZR52 646 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 HIGD1BQ9P298 99 aa12.68□□□□□ -0.38
CNOT3-204ENST00000447684 NPIPB5A8MRT5 1133 aa12.67□□□□□ -0.38
CNOT3-204ENST00000447684 C12orf74Q32Q52 190 aa12.67□□□□□ -0.38
CNOT3-204ENST00000447684 TCTEX1D4Q5JR98 221 aa12.67□□□□□ -0.38
CNOT3-204ENST00000447684 SFTA2Q6UW10 78 aa12.67□□□□□ -0.38
CNOT3-204ENST00000447684 MAFAQ8NHW3 353 aaPredicted RBP12.67□□□□□ -0.38
CNOT3-204ENST00000447684 HHLA3Q9XRX5 114 aa12.67□□□□□ -0.38
CNOT3-204ENST00000447684 SYT8Q8NBV8 401 aa12.67□□□□□ -0.38
CNOT3-204ENST00000447684 PLSCR4Q9NRQ2 329 aa12.67□□□□□ -0.38
CNOT3-204ENST00000447684 KALRNO60229 2985 aa12.66□□□□□ -0.38
CNOT3-204ENST00000447684 TMEM8BA6NDV4 472 aa12.66□□□□□ -0.38
CNOT3-204ENST00000447684 PRRG2O14669 202 aa12.66□□□□□ -0.38
CNOT3-204ENST00000447684 GAS8-AS1O95177 125 aa12.66□□□□□ -0.38
CNOT3-204ENST00000447684 C9orf106Q8NAJ2 232 aa12.66□□□□□ -0.38
CNOT3-204ENST00000447684 GATD1Q8NB37 220 aa12.66□□□□□ -0.38
CNOT3-204ENST00000447684 ZNF48Q96MX3 618 aaPredicted RBP12.66□□□□□ -0.38
CNOT3-204ENST00000447684 SPINK8P0C7L1 97 aa12.66□□□□□ -0.38
CNOT3-204ENST00000447684 TNFAIP6P98066 277 aaPredicted RBP12.66□□□□□ -0.38
CNOT3-204ENST00000447684 TMEM75Q8N9X5 138 aa12.66□□□□□ -0.38
CNOT3-204ENST00000447684 RASL11BQ9BPW5 248 aa12.66□□□□□ -0.38
CNOT3-204ENST00000447684 MRPL16Q9NX20 251 aaKnown RBP12.66□□□□□ -0.38
CNOT3-204ENST00000447684 U3KQK5 164 aa12.66□□□□□ -0.38
CNOT3-204ENST00000447684 TRAV40A0A0B4J280 105 aa12.65□□□□□ -0.38
CNOT3-204ENST00000447684 MAPKAPK5-AS1Q8N8E1 139 aa12.65□□□□□ -0.38
CNOT3-204ENST00000447684 FER1L6-AS2Q96M78 137 aa12.65□□□□□ -0.38
CNOT3-204ENST00000447684 MAP1LC3AQ9H492 121 aa12.65□□□□□ -0.38
CNOT3-204ENST00000447684 NGBQ9NPG2 151 aa12.65□□□□□ -0.38
CNOT3-204ENST00000447684 TRBV19A0A075B6N1 114 aa12.65□□□□□ -0.38
CNOT3-204ENST00000447684 SH2D1AO60880 128 aa12.65□□□□□ -0.38
CNOT3-204ENST00000447684 IGLV2-23P01705 113 aa12.65□□□□□ -0.38
CNOT3-204ENST00000447684 RPL27AP46776 148 aaKnown RBP12.65□□□□□ -0.38
CNOT3-204ENST00000447684 PAX8Q06710 450 aa12.65□□□□□ -0.38
CNOT3-204ENST00000447684 TM2D2Q9BX73 214 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms