RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 A0A1W2PRD5 423 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 A0A1W2PRF3 423 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 A0A1W2PRM7 423 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 C19orf71A6NCJ1 209 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 IGLV2-23P01705 113 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 TCRAP04437 139 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 COL8A1P27658 744 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 GOLT1AQ6ZVE7 132 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 TMEM167AQ8TBQ9 72 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 TMEM191AQ9H0A3 160 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 RBPMS2Q6ZRY4 209 aaKnown RBP11.25□□□□□ -0.61
MCF2L-218ENST00000442625 RAX2Q96IS3 184 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 C17orf77Q96MU5 243 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 MAP1LC3CQ9BXW4 147 aa11.25□□□□□ -0.61
MCF2L-218ENST00000442625 DCHS2Q6V1P9 2916 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 LTAP01374 205 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 ARMS2P0C7Q2 107 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 HTR1DP28221 377 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 LOXL1Q08397 574 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-218ENST00000442625 FER1L6-AS1Q8NA97 138 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 PERPQ96FX8 193 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 CHRDL1Q9BU40 450 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 KLF12Q9Y4X4 402 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 PIEZO2Q9H5I5 2752 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 LOC389332A0A1B0GUA5 103 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 F8WDY8 70 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 FAM71F2Q6NXP2 309 aa11.24□□□□□ -0.61
MCF2L-218ENST00000442625 ZNF785A8K8V0 405 aa11.23□□□□□ -0.61
MCF2L-218ENST00000442625 APOHP02749 345 aaPredicted RBP11.23□□□□□ -0.61
MCF2L-218ENST00000442625 GP9P14770 177 aa11.23□□□□□ -0.61
MCF2L-218ENST00000442625 LYZP61626 148 aa11.23□□□□□ -0.61
MCF2L-218ENST00000442625 CHCHD1Q96BP2 118 aaKnown RBP11.23□□□□□ -0.61
MCF2L-218ENST00000442625 RELNP78509 3460 aa11.23□□□□□ -0.61
MCF2L-218ENST00000442625 SMAD7O15105 426 aaKnown RBP11.23□□□□□ -0.61
MCF2L-218ENST00000442625 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
MCF2L-218ENST00000442625 MRGPRG-AS1Q2M3A8 158 aa11.23□□□□□ -0.61
MCF2L-218ENST00000442625 THAP8Q8NA92 274 aa11.23□□□□□ -0.61
MCF2L-218ENST00000442625 SRSF12Q8WXF0 261 aaKnown RBP11.23□□□□□ -0.61
MCF2L-218ENST00000442625 C17orf100A8MU93 164 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 TNFRSF1AP19438 455 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 C2orf91Q6ZV80 131 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 VSTM2AQ8TAG5 236 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 NEU4Q8WWR8 484 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-218ENST00000442625 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.22□□□□□ -0.61
MCF2L-218ENST00000442625 GPR183P32249 361 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 C5orf17Q8NAS9 161 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 OR8A1Q8NGG7 326 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 IGFBPL1Q8WX77 278 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 CTSZQ9UBR2 303 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 HILPDAQ9Y5L2 63 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 TMSB15BA0A087X1C1 80 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 OR5AL1P0C617 328 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 TMEM30BQ3MIR4 351 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 Q86TA4 180 aa11.22□□□□□ -0.61
MCF2L-218ENST00000442625 BSNQ9UPA5 3926 aa11.21□□□□□ -0.61
MCF2L-218ENST00000442625 MALRD1Q5VYJ5 2156 aa11.21□□□□□ -0.61
MCF2L-218ENST00000442625 OVOL3O00110 214 aa11.21□□□□□ -0.61
MCF2L-218ENST00000442625 MEF2CQ06413 473 aaPredicted RBP11.21□□□□□ -0.61
MCF2L-218ENST00000442625 BSPH1Q075Z2 132 aa11.21□□□□□ -0.61
MCF2L-218ENST00000442625 FMC1Q96HJ9 113 aa11.21□□□□□ -0.61
MCF2L-218ENST00000442625 TTC28Q96AY4 2481 aa11.21□□□□□ -0.61
MCF2L-218ENST00000442625 C7orf71A4D174 169 aa11.21□□□□□ -0.62
MCF2L-218ENST00000442625 IGLV2-11P01706 119 aa11.21□□□□□ -0.62
MCF2L-218ENST00000442625 HLA-DRB1P01911 266 aa11.21□□□□□ -0.62
MCF2L-218ENST00000442625 C12orf54Q6X4T0 127 aa11.21□□□□□ -0.62
MCF2L-218ENST00000442625 PIP4P1Q86T03 277 aa11.21□□□□□ -0.62
MCF2L-218ENST00000442625 WFDC3Q8IUB2 231 aa11.21□□□□□ -0.62
MCF2L-218ENST00000442625 S4R3C0 116 aa11.21□□□□□ -0.62
MCF2L-218ENST00000442625 ASH1LQ9NR48 2969 aaKnown RBP11.2□□□□□ -0.62
MCF2L-218ENST00000442625 AKAP13Q12802 2813 aa11.2□□□□□ -0.62
MCF2L-218ENST00000442625 INS-IGF2F8WCM5 200 aa11.2□□□□□ -0.62
MCF2L-218ENST00000442625 NDUFB3O43676 98 aa11.2□□□□□ -0.62
MCF2L-218ENST00000442625 VMA21Q3ZAQ7 101 aa11.2□□□□□ -0.62
MCF2L-218ENST00000442625 NDFIP1Q9BT67 221 aa11.2□□□□□ -0.62
MCF2L-218ENST00000442625 OTOGLQ3ZCN5 2332 aa11.2□□□□□ -0.62
MCF2L-218ENST00000442625 FAM231BA6NCW3 169 aa11.2□□□□□ -0.62
MCF2L-218ENST00000442625 TMEM178BH3BS89 294 aa11.2□□□□□ -0.62
MCF2L-218ENST00000442625 CEACAM4O75871 244 aa11.2□□□□□ -0.62
MCF2L-218ENST00000442625 GATA3P23771 443 aa11.2□□□□□ -0.62
MCF2L-218ENST00000442625 IFI27P40305 119 aaPredicted RBP11.2□□□□□ -0.62
MCF2L-218ENST00000442625 C3orf36Q3SXR2 165 aa11.2□□□□□ -0.62
MCF2L-218ENST00000442625 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
MCF2L-218ENST00000442625 OR4A5Q8NH83 315 aa11.19□□□□□ -0.62
MCF2L-218ENST00000442625 PRSS3P2Q8NHM4 247 aa11.19□□□□□ -0.62
MCF2L-218ENST00000442625 LOXP28300 417 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-218ENST00000442625 HIST1H1AQ02539 215 aaPredicted RBP11.19□□□□□ -0.62
MCF2L-218ENST00000442625 RAB37Q96AX2 223 aa11.19□□□□□ -0.62
MCF2L-218ENST00000442625 ZNF747Q9BV97 191 aa11.19□□□□□ -0.62
MCF2L-218ENST00000442625 AP5S1Q9NUS5 200 aa11.19□□□□□ -0.62
MCF2L-218ENST00000442625 C1RLQ9NZP8 487 aa11.19□□□□□ -0.62
MCF2L-218ENST00000442625 CD5LO43866 347 aa11.18□□□□□ -0.62
MCF2L-218ENST00000442625 RBP4P02753 201 aa11.18□□□□□ -0.62
MCF2L-218ENST00000442625 LINC01545Q5VT33 79 aa11.18□□□□□ -0.62
MCF2L-218ENST00000442625 NUP37Q8NFH4 326 aa11.18□□□□□ -0.62
MCF2L-218ENST00000442625 JMJD8Q96S16 334 aa11.18□□□□□ -0.62
MCF2L-218ENST00000442625 THYN1Q9P016 225 aa11.18□□□□□ -0.62
MCF2L-218ENST00000442625 ZNF492Q9P255 531 aa11.18□□□□□ -0.62
MCF2L-218ENST00000442625 M0R3E3 92 aa11.18□□□□□ -0.62
MCF2L-218ENST00000442625 MFAP4P55083 255 aa11.18□□□□□ -0.62
MCF2L-218ENST00000442625 BPIFA4PQ86YQ2 179 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms