RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 HAX1O00165 279 aa12.22□□□□□ -0.45
TSC2-206ENST00000439117 LGALS9BQ3B8N2 356 aa12.22□□□□□ -0.45
TSC2-206ENST00000439117 LGALS9CQ6DKI2 356 aa12.22□□□□□ -0.45
TSC2-206ENST00000439117 AMN1Q8IY45 258 aa12.22□□□□□ -0.45
TSC2-206ENST00000439117 RPUSD1Q9UJJ7 312 aaKnown RBP12.22□□□□□ -0.45
TSC2-206ENST00000439117 IGKV3D-20A0A0C4DH25 116 aa12.21□□□□□ -0.45
TSC2-206ENST00000439117 IGHV2-70DA0A0C4DH43 119 aa12.21□□□□□ -0.45
TSC2-206ENST00000439117 SRRM5B3KS81 715 aa12.21□□□□□ -0.45
TSC2-206ENST00000439117 A0A0G2JNJ9 132 aa12.21□□□□□ -0.45
TSC2-206ENST00000439117 VCYO14598 125 aa12.21□□□□□ -0.45
TSC2-206ENST00000439117 Q9UFV3 132 aa12.21□□□□□ -0.45
TSC2-206ENST00000439117 IGHV3-64A0A075B6Q5 118 aa12.21□□□□□ -0.45
TSC2-206ENST00000439117 INAFM2P0DMQ5 153 aa12.21□□□□□ -0.45
TSC2-206ENST00000439117 NEGR1Q7Z3B1 354 aa12.21□□□□□ -0.45
TSC2-206ENST00000439117 LYPD6BQ8NI32 183 aa12.21□□□□□ -0.45
TSC2-206ENST00000439117 DPH3P1Q9H4G8 78 aa12.21□□□□□ -0.45
TSC2-206ENST00000439117 PNRC2Q9NPJ4 139 aaKnown RBP12.21□□□□□ -0.45
TSC2-206ENST00000439117 TRAV8-3A0A0A6YYJ7 113 aa12.21□□□□□ -0.46
TSC2-206ENST00000439117 SIVA1O15304 175 aa12.21□□□□□ -0.46
TSC2-206ENST00000439117 CRPP02741 224 aa12.21□□□□□ -0.46
TSC2-206ENST00000439117 PRR31Q5SQ13 230 aa12.21□□□□□ -0.46
TSC2-206ENST00000439117 TMEM133Q9H2Q1 129 aa12.21□□□□□ -0.46
TSC2-206ENST00000439117 MYLKQ15746 1914 aa12.21□□□□□ -0.46
TSC2-206ENST00000439117 TMEM8BA6NDV4 472 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 TFF1P04155 84 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 GAGE5Q13069 117 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 GAGE6Q13070 117 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 TAL2Q16559 108 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 FAM231DQ6ZW35 169 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 IGLC7A0M8Q6 106 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 SH2D1AO60880 128 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 ZNF329Q86UD4 541 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 HEATR1Q9H583 2144 aaKnown RBP12.2□□□□□ -0.46
TSC2-206ENST00000439117 PCNX2A6NKB5 2137 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 LRRK1Q38SD2 2015 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 K7ENP7 123 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 TMEM167AQ8TBQ9 72 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 DNAJC30Q96LL9 226 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 VGLL1Q99990 258 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 CSTL1Q9H114 145 aa12.2□□□□□ -0.46
TSC2-206ENST00000439117 TRAV40A0A0B4J280 105 aa12.19□□□□□ -0.46
TSC2-206ENST00000439117 DUSP14O95147 198 aaKnown RBP12.19□□□□□ -0.46
TSC2-206ENST00000439117 IGKV2-40A0A087WW87 121 aaPredicted RBP12.19□□□□□ -0.46
TSC2-206ENST00000439117 IGKV2D-40P01614 121 aaPredicted RBP12.19□□□□□ -0.46
TSC2-206ENST00000439117 Q86TA4 180 aa12.19□□□□□ -0.46
TSC2-206ENST00000439117 A0A0U1RRA0 63 aa12.19□□□□□ -0.46
TSC2-206ENST00000439117 CCL25O15444 150 aa12.19□□□□□ -0.46
TSC2-206ENST00000439117 CEACAM8P31997 349 aaPredicted RBP12.19□□□□□ -0.46
TSC2-206ENST00000439117 ZNF672Q499Z4 452 aaPredicted RBP12.19□□□□□ -0.46
TSC2-206ENST00000439117 RNF144BQ7Z419 303 aa12.19□□□□□ -0.46
TSC2-206ENST00000439117 DEFB125Q8N687 156 aa12.19□□□□□ -0.46
TSC2-206ENST00000439117 GNLYP22749 145 aa12.19□□□□□ -0.46
TSC2-206ENST00000439117 CDPF1Q6NVV7 123 aa12.19□□□□□ -0.46
TSC2-206ENST00000439117 VOPP1Q96AW1 172 aa12.19□□□□□ -0.46
TSC2-206ENST00000439117 V9GYV3 84 aa12.19□□□□□ -0.46
TSC2-206ENST00000439117 DOCK11Q5JSL3 2073 aa12.19□□□□□ -0.46
TSC2-206ENST00000439117 PLXNA4Q9HCM2 1894 aa12.18□□□□□ -0.46
TSC2-206ENST00000439117 DOPEY2Q9Y3R5 2298 aa12.18□□□□□ -0.46
TSC2-206ENST00000439117 TRGV11A0A075B6L2 103 aa12.18□□□□□ -0.46
TSC2-206ENST00000439117 PSPNO60542 156 aa12.18□□□□□ -0.46
TSC2-206ENST00000439117 ARMS2P0C7Q2 107 aa12.18□□□□□ -0.46
TSC2-206ENST00000439117 VDAC2P45880 294 aaPredicted RBP12.18□□□□□ -0.46
TSC2-206ENST00000439117 USF3Q68DE3 2245 aa12.18□□□□□ -0.46
TSC2-206ENST00000439117 PAX9P55771 341 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 ZNF726P1Q15940 193 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 PHLDA1Q8WV24 401 aaPredicted RBP12.17□□□□□ -0.46
TSC2-206ENST00000439117 TRAV3A0A0B4J244 114 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 ETV2O00321 342 aaPredicted RBP12.17□□□□□ -0.46
TSC2-206ENST00000439117 FRMPD3Q5JV73 1810 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 C10orf55Q5SWW7 151 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 FHL1Q13642 323 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 GAGE2AQ6NT46 116 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 FOXL2NBQ6ZUU3 175 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 GATD1Q8NB37 220 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 C5orf63A6NC05 138 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 LINC00479Q96M42 142 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 DOCK9Q9BZ29 2069 aa12.17□□□□□ -0.46
TSC2-206ENST00000439117 MYMXA0A1B0GTQ4 84 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 LINC00473A8K010 186 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 ZNF688P0C7X2 276 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 NBL1P41271 181 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 ZNF474Q6S9Z5 364 aaPredicted RBP12.16□□□□□ -0.46
TSC2-206ENST00000439117 LINC01587Q99440 93 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 C1QTNF4Q9BXJ3 329 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 LINC00158P58513 81 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 FAM104BQ5XKR9 115 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 RASL10AQ92737 203 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 MYOD1P15172 320 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 PYGO2Q9BRQ0 406 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 MBNL3Q9NUK0 354 aaKnown RBP12.16□□□□□ -0.46
TSC2-206ENST00000439117 EFNA4P52798 201 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 PRB3Q04118 309 aaPredicted RBP12.16□□□□□ -0.46
TSC2-206ENST00000439117 DTX1Q86Y01 620 aa12.16□□□□□ -0.46
TSC2-206ENST00000439117 PHF3Q92576 2039 aaKnown RBP12.15□□□□□ -0.46
TSC2-206ENST00000439117 SMIM27A0A1W2PRY6 76 aa12.15□□□□□ -0.46
TSC2-206ENST00000439117 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
TSC2-206ENST00000439117 PLAURQ03405 335 aa12.15□□□□□ -0.46
TSC2-206ENST00000439117 C11orf52Q96A22 123 aa12.15□□□□□ -0.46
TSC2-206ENST00000439117 H3BMG7 143 aa12.15□□□□□ -0.46
TSC2-206ENST00000439117 ZNF876PQ49A33 203 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms