RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 LINC00471Q8N535 108 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 LFNGQ8NES3 379 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 OR8A1Q8NGG7 326 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 LRRC20Q8TCA0 184 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 LGALS14Q8TCE9 139 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 LEAP2Q969E1 77 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 SPTSSAQ969W0 71 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 GPR22Q99680 433 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 FAM103A1Q9BTL3 118 aaKnown RBP1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 CHST6Q9GZX3 395 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 PBOV1Q9GZY1 135 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 NSRP1Q9H0G5 558 aaKnown RBP1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 TMBIM4Q9HC24 238 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 CALML5Q9NZT1 146 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 CLEC2DQ9UHP7 191 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 MPC1Q9Y5U8 109 aa1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 PUS1Q9Y606 427 aaKnown RBP eCLIP1.47□□□□□ -2.17
HMGB3P12-201ENST00000438745 IGHV3-43A0A0B4J1X8 118 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 TRAV26-2A0A0B4J265 109 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 A0A1B0GW15 77 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 A0A1B0GXF2 115 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 FUOMA2VDF0 154 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 SMIM23A6NLE4 172 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 MIF4GDA9UHW6 222 aaKnown RBP1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 ZNF736B4DX44 427 aaPredicted RBP1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 F5H768 121 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 H3BUA1 57 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 H7C1C5 153 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 HMGN4O00479 90 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 GGCTO75223 188 aaKnown RBP1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 PIAS1O75925 651 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 RBP1P09455 135 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 TPM1P09493 284 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 CGB7P0DN87 165 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 PYCR1P32322 319 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 MAGEA3P43357 314 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 LGALS7P47929 136 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 LSM6P62312 80 aaKnown RBP1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 LCN6P62502 163 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 GNG3P63215 75 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 INSL4Q14641 139 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 AKIRIN2Q53H80 203 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 IBA57Q5T440 356 aaKnown RBP1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 CTAGE3PQ8IX95 158 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 Q8N814 137 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 GATD1Q8NB37 220 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 OR4B1Q8NGF8 309 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 RASSF5Q8WWW0 418 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 OR5P3Q8WZ94 311 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 GTF2H4Q92759 462 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 MAL2Q969L2 176 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 USMG5Q96IX5 58 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 SIKE1Q9BRV8 207 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 TSSK6Q9BXA6 273 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 RHOFQ9HBH0 211 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 IFT46Q9NQC8 304 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 DIABLOQ9NR28 239 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 LINC00846Q9NV44 126 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 C1orf109Q9NX04 203 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 COA4Q9NYJ1 87 aa1.46□□□□□ -2.18
HMGB3P12-201ENST00000438745 GPR98Q8WXG9 6306 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 IGKV3-7A0A075B6H7 116 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 IGLV10-54A0A075B6I4 117 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 TRAV8-3A0A0A6YYJ7 113 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 A0A0D9SG52 128 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 TMEM213A2RRL7 107 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 C9JCJ5 164 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 ZNF878C9JN71 531 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 PPP5D1E7EU14 171 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 H3BMM0 161 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 J3QRE1 110 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 NOS1APO75052 506 aaPredicted RBP1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 HLA-AP01891 365 aaKnown RBP1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 CTSGP08311 255 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 ASAH2BP0C7U1 165 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 SLC2A1P11166 492 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 CFL1P23528 166 aaKnown RBP1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 MAGEA2P43356 314 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 GZMMP51124 257 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 SPA17Q15506 151 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 ELP2Q6IA86 826 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 GLYATQ6IB77 296 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 LAIR2Q6ISS4 152 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 DRAM2Q6UX65 266 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 RBM45Q8IUH3 476 aaKnown RBP1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 CLECL1Q8IZS7 167 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 SYCE1Q8N0S2 351 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 GRPEL2Q8TAA5 225 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 AQP3Q92482 292 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 UBE2WQ96B02 151 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 REEP6Q96HR9 211 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 UPK3BQ9BT76 320 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 FBXL15Q9H469 300 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 TVP23BQ9NYZ1 205 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 MRPS16Q9Y3D3 137 aaKnown RBP1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 NUBP2Q9Y5Y2 271 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 V9GYQ6 96 aa1.45□□□□□ -2.18
HMGB3P12-201ENST00000438745 USH2AO75445 5202 aa1.44□□□□□ -2.18
HMGB3P12-201ENST00000438745 A0A1B0GX12 115 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms