RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 TACC2O95359 2948 aa14.58□□□□□ -0.08
CLK1-205ENST00000434813 C3orf79P0CE67 100 aa14.58□□□□□ -0.08
CLK1-205ENST00000434813 Q56UQ5 140 aa14.58□□□□□ -0.08
CLK1-205ENST00000434813 MIEN1Q9BRT3 115 aa14.58□□□□□ -0.08
CLK1-205ENST00000434813 SNHG12Q9BXW3 62 aa14.58□□□□□ -0.08
CLK1-205ENST00000434813 NDUFS7O75251 213 aa14.57□□□□□ -0.08
CLK1-205ENST00000434813 HSBP1O75506 76 aa14.57□□□□□ -0.08
CLK1-205ENST00000434813 PSG3Q16557 428 aa14.57□□□□□ -0.08
CLK1-205ENST00000434813 Q71RC1 249 aaPredicted RBP14.57□□□□□ -0.08
CLK1-205ENST00000434813 ZNF462Q96JM2 2506 aa14.57□□□□□ -0.08
CLK1-205ENST00000434813 IGHV2-70DA0A0C4DH43 119 aa14.56□□□□□ -0.08
CLK1-205ENST00000434813 ZNF785A8K8V0 405 aa14.56□□□□□ -0.08
CLK1-205ENST00000434813 RAB4AP20338 218 aa14.56□□□□□ -0.08
CLK1-205ENST00000434813 NTF3P20783 257 aa14.56□□□□□ -0.08
CLK1-205ENST00000434813 MRPL52Q86TS9 123 aaKnown RBP14.56□□□□□ -0.08
CLK1-205ENST00000434813 BORCS7Q96B45 105 aa14.56□□□□□ -0.08
CLK1-205ENST00000434813 ZC2HC1AQ96GY0 325 aa14.56□□□□□ -0.08
CLK1-205ENST00000434813 PSG8Q9UQ74 426 aa14.56□□□□□ -0.08
CLK1-205ENST00000434813 M0R143 59 aa14.56□□□□□ -0.08
CLK1-205ENST00000434813 APOHP02749 345 aaPredicted RBP14.56□□□□□ -0.08
CLK1-205ENST00000434813 FOXA3P55318 350 aaPredicted RBP14.56□□□□□ -0.08
CLK1-205ENST00000434813 BCL6BQ8N143 479 aaPredicted RBP14.56□□□□□ -0.08
CLK1-205ENST00000434813 IGHV7-81A0A0B4J1V7 117 aa14.55□□□□□ -0.08
CLK1-205ENST00000434813 NDUFB8O95169 186 aa14.55□□□□□ -0.08
CLK1-205ENST00000434813 EFNA4P52798 201 aa14.55□□□□□ -0.08
CLK1-205ENST00000434813 FAM162BQ5T6X4 162 aa14.55□□□□□ -0.08
CLK1-205ENST00000434813 OVOL3O00110 214 aa14.54□□□□□ -0.08
CLK1-205ENST00000434813 HAX1O00165 279 aa14.54□□□□□ -0.08
CLK1-205ENST00000434813 SCGB2A1O75556 95 aa14.54□□□□□ -0.08
CLK1-205ENST00000434813 EGR2P11161 476 aaPredicted RBP14.54□□□□□ -0.08
CLK1-205ENST00000434813 RNASEKQ6P5S7 137 aaKnown RBP14.54□□□□□ -0.08
CLK1-205ENST00000434813 AAMDCQ9H7C9 122 aa14.54□□□□□ -0.08
CLK1-205ENST00000434813 CTRLP40313 264 aa14.54□□□□□ -0.08
CLK1-205ENST00000434813 UBE2E1P51965 193 aa14.54□□□□□ -0.08
CLK1-205ENST00000434813 Q8N9W7 124 aa14.54□□□□□ -0.08
CLK1-205ENST00000434813 C1RLQ9NZP8 487 aa14.54□□□□□ -0.08
CLK1-205ENST00000434813 SERTM2A0A1B0GWG4 89 aa14.53□□□□□ -0.08
CLK1-205ENST00000434813 FAM181BA6NEQ2 426 aa14.53□□□□□ -0.08
CLK1-205ENST00000434813 M0R2Z0 102 aa14.53□□□□□ -0.08
CLK1-205ENST00000434813 M0R3E3 92 aa14.53□□□□□ -0.08
CLK1-205ENST00000434813 FAM106CPP0CH98 169 aa14.53□□□□□ -0.08
CLK1-205ENST00000434813 ZNF705AQ6ZN79 300 aaPredicted RBP14.53□□□□□ -0.08
CLK1-205ENST00000434813 URB1-AS1Q96HZ7 61 aa14.53□□□□□ -0.08
CLK1-205ENST00000434813 TXN2Q99757 166 aa14.53□□□□□ -0.08
CLK1-205ENST00000434813 SH2D7A6NKC9 451 aaPredicted RBP14.53□□□□□ -0.08
CLK1-205ENST00000434813 SSTP61278 116 aa14.53□□□□□ -0.08
CLK1-205ENST00000434813 AJUBAQ96IF1 538 aa14.53□□□□□ -0.08
CLK1-205ENST00000434813 LOC102724200A0A096LPH7 203 aaPredicted RBP14.52□□□□□ -0.09
CLK1-205ENST00000434813 CHEK1O14757 476 aa14.52□□□□□ -0.09
CLK1-205ENST00000434813 RPL7P18124 248 aaKnown RBP14.52□□□□□ -0.09
CLK1-205ENST00000434813 PSG9Q00887 426 aa14.52□□□□□ -0.09
CLK1-205ENST00000434813 OR2T8A6NH00 312 aa14.51□□□□□ -0.09
CLK1-205ENST00000434813 CTSGP08311 255 aa14.51□□□□□ -0.09
CLK1-205ENST00000434813 NUTF2P61970 127 aaKnown RBP14.51□□□□□ -0.09
CLK1-205ENST00000434813 PRR31Q5SQ13 230 aa14.51□□□□□ -0.09
CLK1-205ENST00000434813 IGHV3-23P01764 117 aa14.51□□□□□ -0.09
CLK1-205ENST00000434813 KLK9Q2XQG4 91 aa14.51□□□□□ -0.09
CLK1-205ENST00000434813 ARL6IP6Q8N6S5 226 aa14.51□□□□□ -0.09
CLK1-205ENST00000434813 GATD1Q8NB37 220 aa14.51□□□□□ -0.09
CLK1-205ENST00000434813 FAM110DQ8TAY7 271 aaPredicted RBP14.51□□□□□ -0.09
CLK1-205ENST00000434813 CHCHD1Q96BP2 118 aaKnown RBP14.51□□□□□ -0.09
CLK1-205ENST00000434813 NDFIP1Q9BT67 221 aa14.51□□□□□ -0.09
CLK1-205ENST00000434813 KLK9Q9UKQ9 250 aa14.51□□□□□ -0.09
CLK1-205ENST00000434813 A0A1B0GUT8 65 aa14.5□□□□□ -0.09
CLK1-205ENST00000434813 GOSR1O95249 250 aa14.5□□□□□ -0.09
CLK1-205ENST00000434813 RNF224P0DH78 156 aa14.5□□□□□ -0.09
CLK1-205ENST00000434813 CRIP1P50238 77 aa14.5□□□□□ -0.09
CLK1-205ENST00000434813 SPATA45Q537H7 98 aa14.5□□□□□ -0.09
CLK1-205ENST00000434813 FAM120AOSQ5T036 256 aa14.5□□□□□ -0.09
CLK1-205ENST00000434813 Q6AWC8 147 aa14.5□□□□□ -0.09
CLK1-205ENST00000434813 M0QZK8 103 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 SAA4P35542 130 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 CSN1S1P47710 185 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 LMO4P61968 165 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 EBLN2Q6P2I7 272 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 RABAC1Q9UI14 185 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 COL12A1Q99715 3063 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 A0A1B0GW15 77 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 CT45A10P0DMU9 189 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 PMCHL1Q16048 86 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 ASCL2Q99929 193 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 BPESC1Q9GZL8 116 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 LPAR2Q9HBW0 351 aa14.49□□□□□ -0.09
CLK1-205ENST00000434813 C2orf70A6NJV1 201 aa14.48□□□□□ -0.09
CLK1-205ENST00000434813 BTF3P20290 206 aaKnown RBP14.48□□□□□ -0.09
CLK1-205ENST00000434813 RIGQ13278 110 aa14.48□□□□□ -0.09
CLK1-205ENST00000434813 DMRTA1Q5VZB9 504 aa14.48□□□□□ -0.09
CLK1-205ENST00000434813 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.48□□□□□ -0.09
CLK1-205ENST00000434813 ARMS2P0C7Q2 107 aa14.48□□□□□ -0.09
CLK1-205ENST00000434813 S100A7P31151 101 aa14.48□□□□□ -0.09
CLK1-205ENST00000434813 COX8CQ7Z4L0 72 aa14.48□□□□□ -0.09
CLK1-205ENST00000434813 ZNF502Q8TBZ5 544 aa14.48□□□□□ -0.09
CLK1-205ENST00000434813 FBLL1A6NHQ2 334 aaKnown RBP14.47□□□□□ -0.09
CLK1-205ENST00000434813 C8orf49Q96NF6 230 aa14.47□□□□□ -0.09
CLK1-205ENST00000434813 ATP6V0E1O15342 81 aa14.46□□□□□ -0.09
CLK1-205ENST00000434813 TMUB1Q9BVT8 246 aa14.46□□□□□ -0.09
CLK1-205ENST00000434813 IGHV1-24A0A0C4DH33 117 aa14.46□□□□□ -0.1
CLK1-205ENST00000434813 M0QZ24 198 aa14.46□□□□□ -0.1
CLK1-205ENST00000434813 PRB4P10163 310 aaPredicted RBP14.46□□□□□ -0.1
CLK1-205ENST00000434813 ECSCRQ19T08 205 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms