RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 A0A0J9YWU9 116 aa12.64□□□□□ -0.39
CTSD-203ENST00000429746 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
CTSD-203ENST00000429746 SNRPCP09234 159 aaKnown RBP12.64□□□□□ -0.39
CTSD-203ENST00000429746 S100A7P31151 101 aa12.64□□□□□ -0.39
CTSD-203ENST00000429746 SAMD13Q5VXD3 122 aa12.64□□□□□ -0.39
CTSD-203ENST00000429746 Q6ZRG5 221 aa12.64□□□□□ -0.39
CTSD-203ENST00000429746 OR1L4Q8NGR5 311 aa12.64□□□□□ -0.39
CTSD-203ENST00000429746 FAM167A-AS1Q96KT0 104 aa12.64□□□□□ -0.39
CTSD-203ENST00000429746 PARD6GQ9BYG4 376 aaPredicted RBP12.64□□□□□ -0.39
CTSD-203ENST00000429746 SMIM3Q9BZL3 60 aa12.64□□□□□ -0.39
CTSD-203ENST00000429746 ZNF331Q9NQX6 463 aaPredicted RBP12.64□□□□□ -0.39
CTSD-203ENST00000429746 RNF222A6NCQ9 220 aa12.63□□□□□ -0.39
CTSD-203ENST00000429746 ATF4P18848 351 aaPredicted RBP12.63□□□□□ -0.39
CTSD-203ENST00000429746 FAM78BQ5VT40 261 aa12.63□□□□□ -0.39
CTSD-203ENST00000429746 Q8NAQ8 132 aa12.63□□□□□ -0.39
CTSD-203ENST00000429746 ASB13Q8WXK3 278 aa12.63□□□□□ -0.39
CTSD-203ENST00000429746 AQP10Q96PS8 301 aa12.63□□□□□ -0.39
CTSD-203ENST00000429746 PFDN5Q99471 154 aa12.63□□□□□ -0.39
CTSD-203ENST00000429746 CLEC5AQ9NY25 188 aa12.63□□□□□ -0.39
CTSD-203ENST00000429746 ALMS1Q8TCU4 4167 aa12.63□□□□□ -0.39
CTSD-203ENST00000429746 H3BTX0 84 aa12.62□□□□□ -0.39
CTSD-203ENST00000429746 PRB4P10163 310 aaPredicted RBP12.62□□□□□ -0.39
CTSD-203ENST00000429746 CXCL2P19875 107 aa12.62□□□□□ -0.39
CTSD-203ENST00000429746 BPIFA4PQ86YQ2 179 aa12.62□□□□□ -0.39
CTSD-203ENST00000429746 OR11H2Q8NH07 326 aa12.62□□□□□ -0.39
CTSD-203ENST00000429746 SLC25A2Q9BXI2 301 aa12.62□□□□□ -0.39
CTSD-203ENST00000429746 SLC35B3Q9H1N7 401 aa12.62□□□□□ -0.39
CTSD-203ENST00000429746 HRH4Q9H3N8 390 aa12.62□□□□□ -0.39
CTSD-203ENST00000429746 RPRMQ9NS64 109 aa12.62□□□□□ -0.39
CTSD-203ENST00000429746 ZNF586Q9NXT0 402 aa12.62□□□□□ -0.39
CTSD-203ENST00000429746 NDUFB4O95168 129 aa12.61□□□□□ -0.39
CTSD-203ENST00000429746 ZNF705DP0CH99 300 aaPredicted RBP12.61□□□□□ -0.39
CTSD-203ENST00000429746 ZNF705BP0CI00 300 aaPredicted RBP12.61□□□□□ -0.39
CTSD-203ENST00000429746 FGL1Q08830 312 aa12.61□□□□□ -0.39
CTSD-203ENST00000429746 TMEM41BQ5BJD5 291 aa12.61□□□□□ -0.39
CTSD-203ENST00000429746 MIR17HGQ75NE6 70 aa12.61□□□□□ -0.39
CTSD-203ENST00000429746 S100A7AQ86SG5 101 aa12.61□□□□□ -0.39
CTSD-203ENST00000429746 RARRES2Q99969 163 aa12.61□□□□□ -0.39
CTSD-203ENST00000429746 TMEM14CQ9P0S9 112 aa12.61□□□□□ -0.39
CTSD-203ENST00000429746 IGKV3-20P01619 116 aa12.6□□□□□ -0.39
CTSD-203ENST00000429746 PSG3Q16557 428 aa12.6□□□□□ -0.39
CTSD-203ENST00000429746 LCN15Q6UWW0 184 aa12.6□□□□□ -0.39
CTSD-203ENST00000429746 ZNF705AQ6ZN79 300 aaPredicted RBP12.6□□□□□ -0.39
CTSD-203ENST00000429746 ZNF503Q96F45 646 aa12.6□□□□□ -0.39
CTSD-203ENST00000429746 C11orf68Q9H3H3 251 aaKnown RBP12.6□□□□□ -0.39
CTSD-203ENST00000429746 XCL2Q9UBD3 114 aa12.6□□□□□ -0.39
CTSD-203ENST00000429746 RNF24Q9Y225 148 aa12.6□□□□□ -0.39
CTSD-203ENST00000429746 HYDINQ4G0P3 5121 aa12.59□□□□□ -0.39
CTSD-203ENST00000429746 PRAC2D3DTV9 90 aa12.59□□□□□ -0.39
CTSD-203ENST00000429746 RBMY1A1P0DJD3 496 aaKnown RBP12.59□□□□□ -0.39
CTSD-203ENST00000429746 RBMY1CP0DJD4 496 aa12.59□□□□□ -0.39
CTSD-203ENST00000429746 PYYP10082 97 aa12.59□□□□□ -0.39
CTSD-203ENST00000429746 CNN1P51911 297 aaKnown RBP12.59□□□□□ -0.39
CTSD-203ENST00000429746 FXYD7P58549 80 aa12.59□□□□□ -0.39
CTSD-203ENST00000429746 RBMY1FQ15415 496 aaKnown RBP12.59□□□□□ -0.39
CTSD-203ENST00000429746 TNFSF18Q9UNG2 199 aa12.59□□□□□ -0.39
CTSD-203ENST00000429746 TRBV19A0A075B6N1 114 aa12.58□□□□□ -0.4
CTSD-203ENST00000429746 ZNF705FA8MVS1 300 aaPredicted RBP12.58□□□□□ -0.4
CTSD-203ENST00000429746 CRXO43186 299 aaPredicted RBP12.58□□□□□ -0.4
CTSD-203ENST00000429746 JTBO76095 146 aa12.58□□□□□ -0.4
CTSD-203ENST00000429746 OR2T35Q8NGX2 323 aa12.58□□□□□ -0.4
CTSD-203ENST00000429746 SLC50A1Q9BRV3 221 aa12.58□□□□□ -0.4
CTSD-203ENST00000429746 IGHV4-28A0A0C4DH34 117 aa12.57□□□□□ -0.4
CTSD-203ENST00000429746 DEFB4AO15263 64 aa12.57□□□□□ -0.4
CTSD-203ENST00000429746 ZNF253O75346 499 aa12.57□□□□□ -0.4
CTSD-203ENST00000429746 PSG9Q00887 426 aa12.57□□□□□ -0.4
CTSD-203ENST00000429746 EBLN2Q6P2I7 272 aa12.57□□□□□ -0.4
CTSD-203ENST00000429746 C1orf158Q8N1D5 194 aa12.57□□□□□ -0.4
CTSD-203ENST00000429746 ZNF738Q8NE65 137 aa12.57□□□□□ -0.4
CTSD-203ENST00000429746 OR4B1Q8NGF8 309 aa12.57□□□□□ -0.4
CTSD-203ENST00000429746 OR8A1Q8NGG7 326 aa12.57□□□□□ -0.4
CTSD-203ENST00000429746 FXYD5Q96DB9 178 aa12.57□□□□□ -0.4
CTSD-203ENST00000429746 FUT9Q9Y231 359 aa12.57□□□□□ -0.4
CTSD-203ENST00000429746 HIST1H1EP10412 219 aaKnown RBP12.56□□□□□ -0.4
CTSD-203ENST00000429746 FFAR4Q5NUL3 377 aa12.56□□□□□ -0.4
CTSD-203ENST00000429746 RPUSD4Q96CM3 377 aaKnown RBP12.56□□□□□ -0.4
CTSD-203ENST00000429746 MRPL32Q9BYC8 188 aaKnown RBP12.56□□□□□ -0.4
CTSD-203ENST00000429746 KCNIP2Q9NS61 270 aa12.56□□□□□ -0.4
CTSD-203ENST00000429746 VPS13DQ5THJ4 4388 aa12.55□□□□□ -0.4
CTSD-203ENST00000429746 C17orf112F2Z3M2 114 aa12.55□□□□□ -0.4
CTSD-203ENST00000429746 SMLR1H3BR10 107 aa12.55□□□□□ -0.4
CTSD-203ENST00000429746 EIF3GO75821 320 aaKnown RBP eCLIP12.55□□□□□ -0.4
CTSD-203ENST00000429746 IFNA5P01569 189 aa12.55□□□□□ -0.4
CTSD-203ENST00000429746 NUTF2P61970 127 aaKnown RBP12.55□□□□□ -0.4
CTSD-203ENST00000429746 GUK1Q16774 197 aa12.55□□□□□ -0.4
CTSD-203ENST00000429746 C1QTNF4Q9BXJ3 329 aa12.55□□□□□ -0.4
CTSD-203ENST00000429746 MFFQ9GZY8 342 aa12.55□□□□□ -0.4
CTSD-203ENST00000429746 TIMM9Q9Y5J7 89 aa12.55□□□□□ -0.4
CTSD-203ENST00000429746 M0R3E3 92 aa12.54□□□□□ -0.4
CTSD-203ENST00000429746 OR2G3Q8NGZ4 309 aa12.54□□□□□ -0.4
CTSD-203ENST00000429746 NEU1Q99519 415 aa12.54□□□□□ -0.4
CTSD-203ENST00000429746 FXYD6-FXYD2A0A087WZ82 144 aa12.53□□□□□ -0.4
CTSD-203ENST00000429746 M0R2Z0 102 aa12.53□□□□□ -0.4
CTSD-203ENST00000429746 DUSP14O95147 198 aaKnown RBP12.53□□□□□ -0.4
CTSD-203ENST00000429746 MIFP14174 115 aa12.53□□□□□ -0.4
CTSD-203ENST00000429746 RAB2AP61019 212 aa12.53□□□□□ -0.4
CTSD-203ENST00000429746 PDE6HQ13956 83 aa12.53□□□□□ -0.4
CTSD-203ENST00000429746 OR11H4Q8NGC9 324 aa12.53□□□□□ -0.4
CTSD-203ENST00000429746 SCGB1C1Q8TD33 95 aa12.53□□□□□ -0.4
CTSD-203ENST00000429746 ATP6V0CP27449 155 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 157.6 ms