RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 RNASE11Q8TAA1 199 aaKnown RBP7.75□□□□□ -1.17
DDX39B-208ENST00000428098 LINC00854A0A1B0GVQ3 168 aa7.74□□□□□ -1.17
DDX39B-208ENST00000428098 CDS2O95674 445 aa7.74□□□□□ -1.17
DDX39B-208ENST00000428098 FABP1P07148 127 aa7.74□□□□□ -1.17
DDX39B-208ENST00000428098 SRIP30626 198 aa7.74□□□□□ -1.17
DDX39B-208ENST00000428098 SLAQ13239 276 aa7.74□□□□□ -1.17
DDX39B-208ENST00000428098 LINC01556Q5JQF7 62 aa7.74□□□□□ -1.17
DDX39B-208ENST00000428098 THAP8Q8NA92 274 aa7.74□□□□□ -1.17
DDX39B-208ENST00000428098 ZNF431Q8TF32 576 aaPredicted RBP7.74□□□□□ -1.17
DDX39B-208ENST00000428098 GPR82Q96P67 336 aa7.74□□□□□ -1.17
DDX39B-208ENST00000428098 PYGO2Q9BRQ0 406 aa7.74□□□□□ -1.17
DDX39B-208ENST00000428098 SLC45A2Q9UMX9 530 aa7.74□□□□□ -1.17
DDX39B-208ENST00000428098 TMEM56-RWDD3S4R434 201 aa7.74□□□□□ -1.17
DDX39B-208ENST00000428098 PRSS3P35030 304 aa7.73□□□□□ -1.17
DDX39B-208ENST00000428098 ASAH1Q13510 395 aa7.73□□□□□ -1.17
DDX39B-208ENST00000428098 CCDC190Q86UF4 302 aa7.73□□□□□ -1.17
DDX39B-208ENST00000428098 SELENOHQ8IZQ5 122 aaKnown RBP7.73□□□□□ -1.17
DDX39B-208ENST00000428098 LGI3Q8N145 548 aa7.73□□□□□ -1.17
DDX39B-208ENST00000428098 GPX8Q8TED1 209 aa7.73□□□□□ -1.17
DDX39B-208ENST00000428098 BLNKQ8WV28 456 aa7.73□□□□□ -1.17
DDX39B-208ENST00000428098 S100A16Q96FQ6 103 aaKnown RBP7.73□□□□□ -1.17
DDX39B-208ENST00000428098 SLC35E1Q96K37 410 aa7.73□□□□□ -1.17
DDX39B-208ENST00000428098 MRPL16Q9NX20 251 aaKnown RBP7.73□□□□□ -1.17
DDX39B-208ENST00000428098 U3KQ87 197 aa7.73□□□□□ -1.17
DDX39B-208ENST00000428098 RBFOX3A6NFN3 312 aa7.72□□□□□ -1.17
DDX39B-208ENST00000428098 GABARAPH6UMI1 98 aa7.72□□□□□ -1.17
DDX39B-208ENST00000428098 GABARAPO95166 117 aa7.72□□□□□ -1.17
DDX39B-208ENST00000428098 CT45A10P0DMU9 189 aa7.72□□□□□ -1.17
DDX39B-208ENST00000428098 RCVRNP35243 200 aa7.72□□□□□ -1.17
DDX39B-208ENST00000428098 GGNBP1Q5YKI7 109 aa7.72□□□□□ -1.17
DDX39B-208ENST00000428098 TEPPQ6URK8 271 aa7.72□□□□□ -1.17
DDX39B-208ENST00000428098 LHFPL1Q86WI0 220 aa7.72□□□□□ -1.17
DDX39B-208ENST00000428098 ZBTB8BQ8NAP8 495 aaPredicted RBP7.72□□□□□ -1.17
DDX39B-208ENST00000428098 GLYATL2Q8WU03 294 aa7.72□□□□□ -1.17
DDX39B-208ENST00000428098 BAALCQ8WXS3 180 aa7.72□□□□□ -1.17
DDX39B-208ENST00000428098 RBPMSQ93062 196 aaKnown RBP7.72□□□□□ -1.17
DDX39B-208ENST00000428098 ZNF486Q96H40 463 aaPredicted RBP7.72□□□□□ -1.17
DDX39B-208ENST00000428098 IGHV3-30P01768 117 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 IGHV3-33P01772 117 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 SNRPCP09234 159 aaKnown RBP7.71□□□□□ -1.18
DDX39B-208ENST00000428098 SFTA3P0C7M3 94 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 IGHV3-30-3P0DP02 117 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 IGHV3-30-5P0DP03 117 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 TCL1AP56279 114 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 MORN5Q5VZ52 161 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 VGLL1Q99990 258 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 SHANK2-AS3Q9BTD1 123 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 PAXXQ9BUH6 204 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 TMEM222Q9H0R3 208 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 RBKSQ9H477 322 aa7.71□□□□□ -1.18
DDX39B-208ENST00000428098 A0A087X0K7 114 aa7.7□□□□□ -1.18
DDX39B-208ENST00000428098 LOC100131303A0A0U1RQF7 123 aa7.7□□□□□ -1.18
DDX39B-208ENST00000428098 H3BRN7 92 aa7.7□□□□□ -1.18
DDX39B-208ENST00000428098 TNFSF8P32971 234 aa7.7□□□□□ -1.18
DDX39B-208ENST00000428098 ANXA2RQ3ZCQ2 193 aa7.7□□□□□ -1.18
DDX39B-208ENST00000428098 C9orf47Q6ZRZ4 202 aa7.7□□□□□ -1.18
DDX39B-208ENST00000428098 IQCF2Q8IXL9 164 aa7.7□□□□□ -1.18
DDX39B-208ENST00000428098 DTD1Q8TEA8 209 aa7.7□□□□□ -1.18
DDX39B-208ENST00000428098 TMEM147Q9BVK8 224 aa7.7□□□□□ -1.18
DDX39B-208ENST00000428098 TM2D2Q9BX73 214 aa7.7□□□□□ -1.18
DDX39B-208ENST00000428098 TP53TG3Q9ULZ0 132 aa7.7□□□□□ -1.18
DDX39B-208ENST00000428098 TRGV4A0A0C4DH28 118 aa7.69□□□□□ -1.18
DDX39B-208ENST00000428098 RNF222A6NCQ9 220 aa7.69□□□□□ -1.18
DDX39B-208ENST00000428098 MRPS12O15235 138 aaKnown RBP7.69□□□□□ -1.18
DDX39B-208ENST00000428098 CFDP00746 253 aaPredicted RBP7.69□□□□□ -1.18
DDX39B-208ENST00000428098 RPL7P18124 248 aaKnown RBP7.69□□□□□ -1.18
DDX39B-208ENST00000428098 TDRG1Q3Y452 100 aa7.69□□□□□ -1.18
DDX39B-208ENST00000428098 Q6ZQT7 251 aa7.69□□□□□ -1.18
DDX39B-208ENST00000428098 Q8N3U1 123 aa7.69□□□□□ -1.18
DDX39B-208ENST00000428098 ZNF680Q8NEM1 530 aa7.69□□□□□ -1.18
DDX39B-208ENST00000428098 LRRC20Q8TCA0 184 aa7.69□□□□□ -1.18
DDX39B-208ENST00000428098 ZNF479Q96JC4 524 aa7.69□□□□□ -1.18
DDX39B-208ENST00000428098 COPZ2Q9P299 210 aa7.69□□□□□ -1.18
DDX39B-208ENST00000428098 SSR3Q9UNL2 185 aa7.69□□□□□ -1.18
DDX39B-208ENST00000428098 TEX13DA0A0J9YY54 714 aaPredicted RBP7.68□□□□□ -1.18
DDX39B-208ENST00000428098 LCE2BO14633 110 aa7.68□□□□□ -1.18
DDX39B-208ENST00000428098 CD300CQ08708 224 aa7.68□□□□□ -1.18
DDX39B-208ENST00000428098 STEAP1BQ6NZ63 245 aa7.68□□□□□ -1.18
DDX39B-208ENST00000428098 EIF4E3Q8N5X7 224 aaKnown RBP7.68□□□□□ -1.18
DDX39B-208ENST00000428098 BPIFCQ8NFQ6 507 aa7.68□□□□□ -1.18
DDX39B-208ENST00000428098 OR13C8Q8NGS7 320 aa7.68□□□□□ -1.18
DDX39B-208ENST00000428098 ZNF331Q9NQX6 463 aaPredicted RBP7.68□□□□□ -1.18
DDX39B-208ENST00000428098 HSPB7Q9UBY9 170 aa7.68□□□□□ -1.18
DDX39B-208ENST00000428098 PMS2P5A8MQ11 134 aa7.67□□□□□ -1.18
DDX39B-208ENST00000428098 LEPP41159 167 aa7.67□□□□□ -1.18
DDX39B-208ENST00000428098 TIRAPP58753 221 aa7.67□□□□□ -1.18
DDX39B-208ENST00000428098 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
DDX39B-208ENST00000428098 TMEM268Q5VZI3 342 aa7.67□□□□□ -1.18
DDX39B-208ENST00000428098 PCNPQ8WW12 178 aaKnown RBP7.67□□□□□ -1.18
DDX39B-208ENST00000428098 TMEM37Q8WXS4 190 aa7.67□□□□□ -1.18
DDX39B-208ENST00000428098 RTBDNQ9BSG5 229 aaPredicted RBP7.67□□□□□ -1.18
DDX39B-208ENST00000428098 C7orf71A4D174 169 aa7.66□□□□□ -1.18
DDX39B-208ENST00000428098 H3BTX0 84 aa7.66□□□□□ -1.18
DDX39B-208ENST00000428098 ORM1P02763 201 aa7.66□□□□□ -1.18
DDX39B-208ENST00000428098 SULT1A3P0DMM9 295 aa7.66□□□□□ -1.18
DDX39B-208ENST00000428098 SULT1A4P0DMN0 295 aa7.66□□□□□ -1.18
DDX39B-208ENST00000428098 ATP5IP56385 69 aaPredicted RBP7.66□□□□□ -1.18
DDX39B-208ENST00000428098 ZNF846Q147U1 533 aa7.66□□□□□ -1.18
DDX39B-208ENST00000428098 UBE2NLQ5JXB2 153 aa7.66□□□□□ -1.18
DDX39B-208ENST00000428098 GPR107Q5VW38 600 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms