RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 PXMP4Q9Y6I8 212 aa6.65□□□□□ -1.34
SMC1A-203ENST00000428014 LCE6AA0A183 80 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 IGSF23A1L1A6 192 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 FAM24AA6NFZ4 105 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 COX7A2P2O60397 106 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 CST7O76096 145 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 MPC2O95563 127 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 OR5G3P0C626 314 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 IGLC2P0DOY2 106 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 CXCL3P19876 107 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 GATA2P23769 480 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-203ENST00000428014 TSPOP30536 169 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 S100A10P60903 97 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 EWSR1Q01844 656 aaKnown RBP eCLIP6.64□□□□□ -1.35
SMC1A-203ENST00000428014 FGL1Q08830 312 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 ZNF124Q15973 351 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 C10orf113Q5VZT2 155 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 TMEM37Q8WXS4 190 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 ODF3Q96PU9 254 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 RSG1Q9BU20 258 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 NPCDR1Q9BY65 106 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 MRPL32Q9BYC8 188 aaKnown RBP6.64□□□□□ -1.35
SMC1A-203ENST00000428014 ZNF331Q9NQX6 463 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-203ENST00000428014 SLC39A9Q9NUM3 307 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 KLK5Q9Y337 293 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-203ENST00000428014 SELENOKQ9Y6D0 94 aa6.64□□□□□ -1.35
SMC1A-203ENST00000428014 TRBV7-9A0A0J9YWB2 115 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 A0A0J9YWU9 116 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 C17orf112F2Z3M2 114 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 H0YIZ8 118 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 JTBO76095 146 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 C4BPBP20851 252 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 PSG9Q00887 426 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 PSG3Q16557 428 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 CEMP1Q6PRD7 247 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-203ENST00000428014 AMTNQ6UX39 209 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 TMEM256Q8N2U0 113 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 ARL6IP6Q8N6S5 226 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 ZNF709Q8N972 641 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 OR5C1Q8NGR4 320 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 RNF126Q9BV68 326 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 SCRT1Q9BWW7 348 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 WDR61Q9GZS3 305 aaKnown RBP6.63□□□□□ -1.35
SMC1A-203ENST00000428014 SLC25A22Q9H936 323 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 PRELID1Q9Y255 219 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 X6R8D5 127 aa6.63□□□□□ -1.35
SMC1A-203ENST00000428014 TRAV8-2A0A0B4J237 113 aa6.62□□□□□ -1.35
SMC1A-203ENST00000428014 KNCNA6PVL3 124 aa6.62□□□□□ -1.35
SMC1A-203ENST00000428014 NMBP08949 121 aa6.62□□□□□ -1.35
SMC1A-203ENST00000428014 GIPP09681 153 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-203ENST00000428014 FCN2Q15485 313 aa6.62□□□□□ -1.35
SMC1A-203ENST00000428014 LYPD1Q8N2G4 141 aa6.62□□□□□ -1.35
SMC1A-203ENST00000428014 C11orf45Q8TAV5 145 aa6.62□□□□□ -1.35
SMC1A-203ENST00000428014 SAT2Q96F10 170 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-203ENST00000428014 FAM210BQ96KR6 192 aa6.62□□□□□ -1.35
SMC1A-203ENST00000428014 IGF2BP2-AS1Q96M15 143 aa6.62□□□□□ -1.35
SMC1A-203ENST00000428014 ATP5SQ99766 215 aa6.62□□□□□ -1.35
SMC1A-203ENST00000428014 HSPB11Q9Y547 144 aa6.62□□□□□ -1.35
SMC1A-203ENST00000428014 hCG_2014768A0A024R1R8 64 aa6.61□□□□□ -1.35
SMC1A-203ENST00000428014 HIST1H1EP10412 219 aaKnown RBP6.61□□□□□ -1.35
SMC1A-203ENST00000428014 FGF7P21781 194 aa6.61□□□□□ -1.35
SMC1A-203ENST00000428014 NHLH2Q02577 135 aa6.61□□□□□ -1.35
SMC1A-203ENST00000428014 ZNF266Q14584 549 aa6.61□□□□□ -1.35
SMC1A-203ENST00000428014 OR11H7Q8NGC8 314 aa6.61□□□□□ -1.35
SMC1A-203ENST00000428014 OR8A1Q8NGG7 326 aa6.61□□□□□ -1.35
SMC1A-203ENST00000428014 UHRF2Q96PU4 802 aa6.61□□□□□ -1.35
SMC1A-203ENST00000428014 OR5AC2Q9NZP5 309 aa6.61□□□□□ -1.35
SMC1A-203ENST00000428014 GOLT1BQ9Y3E0 138 aa6.61□□□□□ -1.35
SMC1A-203ENST00000428014 TIMM9Q9Y5J7 89 aa6.61□□□□□ -1.35
SMC1A-203ENST00000428014 UBE2L5PA0A1B0GUS4 154 aa6.6□□□□□ -1.35
SMC1A-203ENST00000428014 A0A1B0GVG6 124 aa6.6□□□□□ -1.35
SMC1A-203ENST00000428014 RPL12P30050 165 aaKnown RBP6.6□□□□□ -1.35
SMC1A-203ENST00000428014 CNN1P51911 297 aaKnown RBP6.6□□□□□ -1.35
SMC1A-203ENST00000428014 FAM78BQ5VT40 261 aa6.6□□□□□ -1.35
SMC1A-203ENST00000428014 MIC13Q5XKP0 118 aa6.6□□□□□ -1.35
SMC1A-203ENST00000428014 THAP6Q8TBB0 222 aa6.6□□□□□ -1.35
SMC1A-203ENST00000428014 LINC00052Q96N35 136 aa6.6□□□□□ -1.35
SMC1A-203ENST00000428014 AQP10Q96PS8 301 aa6.6□□□□□ -1.35
SMC1A-203ENST00000428014 PPP1R14DQ9NXH3 145 aa6.6□□□□□ -1.35
SMC1A-203ENST00000428014 RFNGQ9Y644 331 aa6.6□□□□□ -1.35
SMC1A-203ENST00000428014 TRBV19A0A075B6N1 114 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 IGHV4-28A0A0C4DH34 117 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 BOLA2-SMG1P6H3BVE0 249 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 SIX6O95475 246 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 IFNA5P01569 189 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 CDKN1BP46527 198 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 SERF2P84101 59 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 GDF5OSQ5U4N7 250 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 ZNF493Q6ZR52 646 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 AKAP14Q86UN6 197 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 OR2G3Q8NGZ4 309 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 LRRC20Q8TCA0 184 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 PHLDA1Q8WV24 401 aaPredicted RBP6.59□□□□□ -1.35
SMC1A-203ENST00000428014 RPUSD4Q96CM3 377 aaKnown RBP6.59□□□□□ -1.35
SMC1A-203ENST00000428014 C20orf173Q96LM9 149 aa6.59□□□□□ -1.35
SMC1A-203ENST00000428014 PSMG3Q9BT73 122 aaPredicted RBP6.59□□□□□ -1.35
SMC1A-203ENST00000428014 STARD9Q9P2P6 4700 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 TRAV10A0A0B4J240 114 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 RBAKDNA6NC62 111 aa6.58□□□□□ -1.36
SMC1A-203ENST00000428014 CXorf65A6NEN9 183 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms