RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 IGKV1-5P01602 117 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 AZU1P20160 251 aa10.65□□□□□ -0.7
SPG11-202ENST00000427534 CEACAM8P31997 349 aaPredicted RBP10.65□□□□□ -0.7
SPG11-202ENST00000427534 CITED2Q99967 270 aaPredicted RBP10.65□□□□□ -0.7
SPG11-202ENST00000427534 SUPT4H1P63272 117 aaKnown RBP10.65□□□□□ -0.71
SPG11-202ENST00000427534 OR2K2Q8NGT1 345 aa10.65□□□□□ -0.71
SPG11-202ENST00000427534 hDV102S1A0JD36 115 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 ZNF561-AS1K7EIQ3 104 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 MINOS1Q5TGZ0 78 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 MINOS1-NBL1R4GNA1 71 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 CACNA1DQ01668 2161 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 IGKV1-39P01597 117 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 IGKV1D-39P04432 117 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 WDR83OSQ9Y284 106 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 ARFGEF3Q5TH69 2177 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 A0A1B0GW15 77 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 IGHV1-69DA0A0B4J2H0 117 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 IGHV1-69P01742 117 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 Q6ZQT7 251 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 TPSG1Q9NRR2 321 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 IGKV1OR2-108A0A075B7D4 117 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 UBE2E1P51965 193 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 Q6AWC8 147 aa10.64□□□□□ -0.71
SPG11-202ENST00000427534 DIDO1Q9BTC0 2240 aaKnown RBP10.63□□□□□ -0.71
SPG11-202ENST00000427534 M0R1W7 72 aa10.63□□□□□ -0.71
SPG11-202ENST00000427534 NDUFB8O95169 186 aa10.63□□□□□ -0.71
SPG11-202ENST00000427534 ATP6V0BQ99437 205 aa10.63□□□□□ -0.71
SPG11-202ENST00000427534 TCTEX1D4Q5JR98 221 aa10.63□□□□□ -0.71
SPG11-202ENST00000427534 CFHR2P36980 270 aa10.63□□□□□ -0.71
SPG11-202ENST00000427534 TNFRSF14Q92956 283 aa10.63□□□□□ -0.71
SPG11-202ENST00000427534 ZMAT4Q9H898 229 aa10.63□□□□□ -0.71
SPG11-202ENST00000427534 F8WEM9 126 aa10.63□□□□□ -0.71
SPG11-202ENST00000427534 REG4Q9BYZ8 158 aa10.63□□□□□ -0.71
SPG11-202ENST00000427534 SS18Q15532 418 aa10.63□□□□□ -0.71
SPG11-202ENST00000427534 AMN1Q8IY45 258 aa10.63□□□□□ -0.71
SPG11-202ENST00000427534 IGHV4-4A0A075B6R2 117 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 RPL32P62910 135 aaKnown RBP10.62□□□□□ -0.71
SPG11-202ENST00000427534 Q6P435 159 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 DAZ1Q9NQZ3 744 aaKnown RBP10.62□□□□□ -0.71
SPG11-202ENST00000427534 DLX4Q92988 240 aaPredicted RBP10.62□□□□□ -0.71
SPG11-202ENST00000427534 DOPEY2Q9Y3R5 2298 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 THSD7BQ9C0I4 1608 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 TRAV8-3A0A0A6YYJ7 113 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 A0A1W2PRE2 83 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 TEX36Q5VZQ5 186 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 EDA2RQ9HAV5 297 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 EP300Q09472 2414 aaPredicted RBP10.62□□□□□ -0.71
SPG11-202ENST00000427534 TRAV8-4A0A0B4J246 113 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 MBD3L1Q8WWY6 194 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 SPTBN1Q01082 2364 aaKnown RBP10.62□□□□□ -0.71
SPG11-202ENST00000427534 ZNF503-AS2A6NEH8 195 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 IGHV4-59P01825 116 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 APRG1Q8IVJ8 170 aa10.62□□□□□ -0.71
SPG11-202ENST00000427534 A0A0G2JRQ6 117 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 DEFB4AO15263 64 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 QRFPP83859 136 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 DEFB105AQ8NG35 78 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 CYTL1Q9NRR1 136 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 TRAV25A0A0B4J276 109 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 HIST2H2BDQ6DRA6 164 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 GLRX5Q86SX6 157 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 RPP25LQ8N5L8 163 aaKnown RBP10.61□□□□□ -0.71
SPG11-202ENST00000427534 IFI27L1Q96BM0 104 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 ABCA4P78363 2273 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 PSG3Q16557 428 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 PLNP26678 52 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 FHL1Q13642 323 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 ORMDL2Q53FV1 153 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 TMEM158Q8WZ71 300 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 LRRK1Q38SD2 2015 aa10.61□□□□□ -0.71
SPG11-202ENST00000427534 HIST2H2BCQ6DN03 193 aa10.6□□□□□ -0.71
SPG11-202ENST00000427534 TMEM213A2RRL7 107 aa10.6□□□□□ -0.71
SPG11-202ENST00000427534 FOXL2NBQ6ZUU3 175 aa10.6□□□□□ -0.71
SPG11-202ENST00000427534 MST1LQ2TV78 715 aa10.6□□□□□ -0.71
SPG11-202ENST00000427534 ZNRF2Q8NHG8 242 aa10.6□□□□□ -0.71
SPG11-202ENST00000427534 ANAPC10Q9UM13 185 aa10.6□□□□□ -0.71
SPG11-202ENST00000427534 WDR81Q562E7 1941 aa10.6□□□□□ -0.71
SPG11-202ENST00000427534 SIP14410 1827 aa10.6□□□□□ -0.71
SPG11-202ENST00000427534 IGKV2D-24A0A075B6R9 120 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 DEFB112Q30KQ8 113 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 TMEM170AQ8WVE7 144 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 OSTCQ9NRP0 149 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 PLXND1Q9Y4D7 1925 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 IGHV2-70DA0A0C4DH43 119 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 A0A1W2PPI3 338 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 NMSQ5H8A3 153 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 USMG5Q96IX5 58 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 PTPRDP23468 1912 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 F2Z2F3 143 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 PRIMA1Q86XR5 153 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 THAP8Q8NA92 274 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 HELZP42694 1942 aaKnown RBP10.59□□□□□ -0.71
SPG11-202ENST00000427534 E9PQ18 207 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 TNFSF13O75888 250 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 ARMS2P0C7Q2 107 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 C8orf86Q6ZUL3 223 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 TSKUQ8WUA8 353 aa10.59□□□□□ -0.71
SPG11-202ENST00000427534 GVINP1Q7Z2Y8 2422 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms